{"id":"https://openalex.org/W2125376116","doi":"https://doi.org/10.1093/bioinformatics/btt441","title":"WebRASP: a server for computing energy scores to assess the accuracy and stability of RNA 3D structures","display_name":"WebRASP: a server for computing energy scores to assess the accuracy and stability of RNA 3D structures","publication_year":2013,"publication_date":"2013-08-07","ids":{"openalex":"https://openalex.org/W2125376116","doi":"https://doi.org/10.1093/bioinformatics/btt441","mag":"2125376116","pmid":"https://pubmed.ncbi.nlm.nih.gov/23929030"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btt441","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt441","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/20/2649/48893528/bioinformatics_29_20_2649.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/29/20/2649/48893528/bioinformatics_29_20_2649.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083619758","display_name":"Tom\u00e1s Norambuena","orcid":"https://orcid.org/0000-0001-6477-0301"},"institutions":[{"id":"https://openalex.org/I4210163394","display_name":"Millennium Institute on Immunology and Immunotherapy","ror":"https://ror.org/05j6ybs54","country_code":"CL","type":"facility","lineage":["https://openalex.org/I4210163394"]},{"id":"https://openalex.org/I162148367","display_name":"Pontificia Universidad Cat\u00f3lica de Chile","ror":"https://ror.org/04teye511","country_code":"CL","type":"education","lineage":["https://openalex.org/I162148367"]},{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"education","lineage":["https://openalex.org/I32389192"]}],"countries":["CL","US"],"is_corresponding":true,"raw_author_name":"Tomas Norambuena","raw_affiliation_strings":["1 Facultad de Ciencias Biologicas, Departamento de Genetica Molecular y Microbiologia, Pontificia Universidad Catolica de Chile, Alameda 340, 2Molecular Bioinformatics Laboratory, Millennium Institute on Immunology and Immunotherapy, Santiago, Chile and 3Division of Informatics, Department of Pathology, University of Alabama at Birmingham, 619 19th st. south, Birmingham, AL 35249, USA"],"affiliations":[{"raw_affiliation_string":"1 Facultad de Ciencias Biologicas, Departamento de Genetica Molecular y Microbiologia, Pontificia Universidad Catolica de Chile, Alameda 340, 2Molecular Bioinformatics Laboratory, Millennium Institute on Immunology and Immunotherapy, Santiago, Chile and 3Division of Informatics, Department of Pathology, University of Alabama at Birmingham, 619 19th st. south, Birmingham, AL 35249, USA","institution_ids":["https://openalex.org/I4210163394","https://openalex.org/I162148367","https://openalex.org/I32389192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026456338","display_name":"Jorge F. Cares","orcid":null},"institutions":[{"id":"https://openalex.org/I4210163394","display_name":"Millennium Institute on Immunology and Immunotherapy","ror":"https://ror.org/05j6ybs54","country_code":"CL","type":"facility","lineage":["https://openalex.org/I4210163394"]},{"id":"https://openalex.org/I162148367","display_name":"Pontificia Universidad Cat\u00f3lica de Chile","ror":"https://ror.org/04teye511","country_code":"CL","type":"education","lineage":["https://openalex.org/I162148367"]},{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"education","lineage":["https://openalex.org/I32389192"]}],"countries":["CL","US"],"is_corresponding":false,"raw_author_name":"Jorge F. Cares","raw_affiliation_strings":["1 Facultad de Ciencias Biologicas, Departamento de Genetica Molecular y Microbiologia, Pontificia Universidad Catolica de Chile, Alameda 340, 2Molecular Bioinformatics Laboratory, Millennium Institute on Immunology and Immunotherapy, Santiago, Chile and 3Division of Informatics, Department of Pathology, University of Alabama at Birmingham, 619 19th st. south, Birmingham, AL 35249, USA"],"affiliations":[{"raw_affiliation_string":"1 Facultad de Ciencias Biologicas, Departamento de Genetica Molecular y Microbiologia, Pontificia Universidad Catolica de Chile, Alameda 340, 2Molecular Bioinformatics Laboratory, Millennium Institute on Immunology and Immunotherapy, Santiago, Chile and 3Division of Informatics, Department of Pathology, University of Alabama at Birmingham, 619 19th st. south, Birmingham, AL 35249, USA","institution_ids":["https://openalex.org/I4210163394","https://openalex.org/I162148367","https://openalex.org/I32389192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029911656","display_name":"Emidio Capriotti","orcid":"https://orcid.org/0000-0002-2323-0963"},"institutions":[{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"education","lineage":["https://openalex.org/I32389192"]},{"id":"https://openalex.org/I162148367","display_name":"Pontificia Universidad Cat\u00f3lica de Chile","ror":"https://ror.org/04teye511","country_code":"CL","type":"education","lineage":["https://openalex.org/I162148367"]},{"id":"https://openalex.org/I4210163394","display_name":"Millennium Institute on Immunology and Immunotherapy","ror":"https://ror.org/05j6ybs54","country_code":"CL","type":"facility","lineage":["https://openalex.org/I4210163394"]}],"countries":["CL","US"],"is_corresponding":false,"raw_author_name":"Emidio Capriotti","raw_affiliation_strings":["1 Facultad de Ciencias Biologicas, Departamento de Genetica Molecular y Microbiologia, Pontificia Universidad Catolica de Chile, Alameda 340, 2Molecular Bioinformatics Laboratory, Millennium Institute on Immunology and Immunotherapy, Santiago, Chile and 3Division of Informatics, Department of Pathology, University of Alabama at Birmingham, 619 19th st. south, Birmingham, AL 35249, USA"],"affiliations":[{"raw_affiliation_string":"1 Facultad de Ciencias Biologicas, Departamento de Genetica Molecular y Microbiologia, Pontificia Universidad Catolica de Chile, Alameda 340, 2Molecular Bioinformatics Laboratory, Millennium Institute on Immunology and Immunotherapy, Santiago, Chile and 3Division of Informatics, Department of Pathology, University of Alabama at Birmingham, 619 19th st. south, Birmingham, AL 35249, USA","institution_ids":["https://openalex.org/I4210163394","https://openalex.org/I162148367","https://openalex.org/I32389192"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5032046108","display_name":"Francisco Melo","orcid":"https://orcid.org/0000-0002-0424-5991"},"institutions":[{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"education","lineage":["https://openalex.org/I32389192"]},{"id":"https://openalex.org/I162148367","display_name":"Pontificia Universidad Cat\u00f3lica de Chile","ror":"https://ror.org/04teye511","country_code":"CL","type":"education","lineage":["https://openalex.org/I162148367"]},{"id":"https://openalex.org/I4210163394","display_name":"Millennium Institute on Immunology and Immunotherapy","ror":"https://ror.org/05j6ybs54","country_code":"CL","type":"facility","lineage":["https://openalex.org/I4210163394"]}],"countries":["CL","US"],"is_corresponding":false,"raw_author_name":"Francisco Melo","raw_affiliation_strings":["1 Facultad de Ciencias Biologicas, Departamento de Genetica Molecular y Microbiologia, Pontificia Universidad Catolica de Chile, Alameda 340, 2Molecular Bioinformatics Laboratory, Millennium Institute on Immunology and Immunotherapy, Santiago, Chile and 3Division of Informatics, Department of Pathology, University of Alabama at Birmingham, 619 19th st. south, Birmingham, AL 35249, USA"],"affiliations":[{"raw_affiliation_string":"1 Facultad de Ciencias Biologicas, Departamento de Genetica Molecular y Microbiologia, Pontificia Universidad Catolica de Chile, Alameda 340, 2Molecular Bioinformatics Laboratory, Millennium Institute on Immunology and Immunotherapy, Santiago, Chile and 3Division of Informatics, Department of Pathology, University of Alabama at Birmingham, 619 19th st. south, Birmingham, AL 35249, USA","institution_ids":["https://openalex.org/I4210163394","https://openalex.org/I162148367","https://openalex.org/I32389192"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5083619758"],"corresponding_institution_ids":["https://openalex.org/I162148367","https://openalex.org/I32389192","https://openalex.org/I4210163394"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.4485,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.66473009,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"29","issue":"20","first_page":"2649","last_page":"2650"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.7927155494689941},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7781460881233215},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.6643712520599365},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5961897969245911},{"id":"https://openalex.org/keywords/pairwise-comparison","display_name":"Pairwise comparison","score":0.55953449010849},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.5284045934677124},{"id":"https://openalex.org/keywords/nucleic-acid-structure","display_name":"Nucleic acid structure","score":0.5206805467605591},{"id":"https://openalex.org/keywords/coding","display_name":"Coding (social sciences)","score":0.5102939605712891},{"id":"https://openalex.org/keywords/web-browser","display_name":"Web browser","score":0.4531935453414917},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.40945762395858765},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.23172694444656372},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.22292491793632507},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.15610337257385254},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14586660265922546},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08058178424835205}],"concepts":[{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.7927155494689941},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7781460881233215},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.6643712520599365},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5961897969245911},{"id":"https://openalex.org/C184898388","wikidata":"https://www.wikidata.org/wiki/Q1435712","display_name":"Pairwise comparison","level":2,"score":0.55953449010849},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.5284045934677124},{"id":"https://openalex.org/C126142528","wikidata":"https://www.wikidata.org/wiki/Q3771876","display_name":"Nucleic acid structure","level":4,"score":0.5206805467605591},{"id":"https://openalex.org/C179518139","wikidata":"https://www.wikidata.org/wiki/Q5140297","display_name":"Coding (social sciences)","level":2,"score":0.5102939605712891},{"id":"https://openalex.org/C2983909278","wikidata":"https://www.wikidata.org/wiki/Q6368","display_name":"Web browser","level":3,"score":0.4531935453414917},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.40945762395858765},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.23172694444656372},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.22292491793632507},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.15610337257385254},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14586660265922546},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08058178424835205},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020871","descriptor_name":"RNA Stability","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020871","descriptor_name":"RNA Stability","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020871","descriptor_name":"RNA Stability","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":8,"locations":[{"id":"doi:10.1093/bioinformatics/btt441","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt441","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/20/2649/48893528/bioinformatics_29_20_2649.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:23929030","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23929030","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:americanae.aecid.es:3335340","is_oa":true,"landing_page_url":"http://americanae.aecid.es/americanae/es/registros/registro.do?tipoRegistro=MTD&idBib=3335340","pdf_url":null,"source":{"id":"https://openalex.org/S4306400786","display_name":"Americanae (AECID Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BIOINFORMATICS","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:americanae.aecid.es:3335341","is_oa":true,"landing_page_url":"http://americanae.aecid.es/americanae/es/registros/registro.do?tipoRegistro=MTD&idBib=3335341","pdf_url":null,"source":{"id":"https://openalex.org/S4306400786","display_name":"Americanae (AECID Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BIOINFORMATICS","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:cris.unibo.it:11585/564976","is_oa":false,"landing_page_url":"http://hdl.handle.net/11585/564976","pdf_url":null,"source":{"id":"https://openalex.org/S4306402579","display_name":"Archivio istituzionale della ricerca (Alma Mater Studiorum Universit\u00e0 di Bologna)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210117483","host_organization_name":"Istituto di Ematologia di Bologna","host_organization_lineage":["https://openalex.org/I4210117483"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:europepmc.org:2790127","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3789544","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:localhost:10533/133953","is_oa":true,"landing_page_url":"http://hdl.handle.net/10533/133953","pdf_url":null,"source":{"id":"https://openalex.org/S4306402641","display_name":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Cient\u00edficas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4383465926","host_organization_name":"LA Referencia","host_organization_lineage":["https://openalex.org/I4383465926"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BIOINFORMATICS","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:localhost:10533/133954","is_oa":true,"landing_page_url":"http://hdl.handle.net/10533/133954","pdf_url":null,"source":{"id":"https://openalex.org/S4306402641","display_name":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Cient\u00edficas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4383465926","host_organization_name":"LA Referencia","host_organization_lineage":["https://openalex.org/I4383465926"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BIOINFORMATICS","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btt441","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt441","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/20/2649/48893528/bioinformatics_29_20_2649.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Affordable and clean energy","id":"https://metadata.un.org/sdg/7","score":0.7200000286102295}],"awards":[],"funders":[{"id":"https://openalex.org/F4320312852","display_name":"University of Alabama","ror":"https://ror.org/03xrrjk67"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2125376116.pdf","grobid_xml":"https://content.openalex.org/works/W2125376116.grobid-xml"},"referenced_works_count":14,"referenced_works":["https://openalex.org/W1988409793","https://openalex.org/W2017838368","https://openalex.org/W2046224798","https://openalex.org/W2077064224","https://openalex.org/W2077655287","https://openalex.org/W2087616533","https://openalex.org/W2103894153","https://openalex.org/W2106434056","https://openalex.org/W2108688393","https://openalex.org/W2116687527","https://openalex.org/W2120947815","https://openalex.org/W2135300233","https://openalex.org/W2145477667","https://openalex.org/W2157151871"],"related_works":["https://openalex.org/W2390212769","https://openalex.org/W2948436713","https://openalex.org/W2331105419","https://openalex.org/W2588278294","https://openalex.org/W2013211627","https://openalex.org/W2100630309","https://openalex.org/W4220987767","https://openalex.org/W2340902485","https://openalex.org/W2125376116","https://openalex.org/W2156282798"],"abstract_inverted_index":{"The":[0],"web":[1,15],"server":[2],"is":[3],"available":[4],"at":[5],"http://melolab.org/webrasp.":[6],"It":[7],"has":[8],"been":[9],"tested":[10],"on":[11],"the":[12],"most":[13],"popular":[14],"browsers":[16],"and":[17],"requires":[18],"Java":[19],"plugin":[20],"for":[21],"Jmol":[22],"visualization.":[23]},"counts_by_year":[{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
