{"id":"https://openalex.org/W2148498717","doi":"https://doi.org/10.1093/bioinformatics/btt249","title":"Relation between sequence and structure in membrane proteins","display_name":"Relation between sequence and structure in membrane proteins","publication_year":2013,"publication_date":"2013-05-14","ids":{"openalex":"https://openalex.org/W2148498717","doi":"https://doi.org/10.1093/bioinformatics/btt249","mag":"2148498717","pmid":"https://pubmed.ncbi.nlm.nih.gov/23677941"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btt249","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt249","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/13/1589/18536395/btt249.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/29/13/1589/18536395/btt249.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063381971","display_name":"Mireia Olivella","orcid":"https://orcid.org/0000-0002-6035-3399"},"institutions":[{"id":"https://openalex.org/I115304662","display_name":"Universitat de Vic - Universitat Central de Catalunya","ror":"https://ror.org/006zjws59","country_code":"ES","type":"education","lineage":["https://openalex.org/I115304662"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Mireia Olivella","raw_affiliation_strings":["Grup de Recerca en Bioinform\u00e0tica i Estad\u00edstica M\u00e8dica, Departament de Biologia de Sistemes, Escola Polit\u00e8cnica Superior, Universitat de Vic, 08500 Vic, Barcelona, Catalonia, Spain. Mireia.Olivella@uvic.cat","Grup de Recerca en Bioinforma `tica i Estad\u0131 \u00b4stica Me `dica, Departament de Biologia de Sistemes, Escola Polite `cnica Superior, Universitat de Vic, 08500 Vic, Barcelona, Catalonia, Spain and"],"affiliations":[{"raw_affiliation_string":"Grup de Recerca en Bioinform\u00e0tica i Estad\u00edstica M\u00e8dica, Departament de Biologia de Sistemes, Escola Polit\u00e8cnica Superior, Universitat de Vic, 08500 Vic, Barcelona, Catalonia, Spain. Mireia.Olivella@uvic.cat","institution_ids":["https://openalex.org/I9617848"]},{"raw_affiliation_string":"Grup de Recerca en Bioinforma `tica i Estad\u0131 \u00b4stica Me `dica, Departament de Biologia de Sistemes, Escola Polite `cnica Superior, Universitat de Vic, 08500 Vic, Barcelona, Catalonia, Spain and","institution_ids":["https://openalex.org/I115304662"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058251799","display_name":"\u00c1ngel Gonz\u00e1lez","orcid":"https://orcid.org/0000-0002-2284-8307"},"institutions":[{"id":"https://openalex.org/I123044942","display_name":"Universitat Aut\u00f2noma de Barcelona","ror":"https://ror.org/052g8jq94","country_code":"ES","type":"education","lineage":["https://openalex.org/I123044942"]},{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Angel Gonzalez","raw_affiliation_strings":["Laboratori de Medicina Computacional, Unitat de Bioestad stica, Facultat de Medicina, Universitat Auto `noma de Barcelona, 08193 Bellaterra, Spain","Laboratori de Medicina Computacional, Unitat de Bioestad\u0131 \u00b4stica, Facultat de Medicina, Universitat Auto `noma de Barcelona, 08193 Bellaterra, Spain"],"affiliations":[{"raw_affiliation_string":"Laboratori de Medicina Computacional, Unitat de Bioestad stica, Facultat de Medicina, Universitat Auto `noma de Barcelona, 08193 Bellaterra, Spain","institution_ids":["https://openalex.org/I71999127"]},{"raw_affiliation_string":"Laboratori de Medicina Computacional, Unitat de Bioestad\u0131 \u00b4stica, Facultat de Medicina, Universitat Auto `noma de Barcelona, 08193 Bellaterra, Spain","institution_ids":["https://openalex.org/I123044942"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046444163","display_name":"Leonardo Pardo","orcid":"https://orcid.org/0000-0003-1778-7420"},"institutions":[{"id":"https://openalex.org/I123044942","display_name":"Universitat Aut\u00f2noma de Barcelona","ror":"https://ror.org/052g8jq94","country_code":"ES","type":"education","lineage":["https://openalex.org/I123044942"]},{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Leonardo Pardo","raw_affiliation_strings":["Laboratori de Medicina Computacional, Unitat de Bioestad stica, Facultat de Medicina, Universitat Auto `noma de Barcelona, 08193 Bellaterra, Spain","Laboratori de Medicina Computacional, Unitat de Bioestad\u0131 \u00b4stica, Facultat de Medicina, Universitat Auto `noma de Barcelona, 08193 Bellaterra, Spain"],"affiliations":[{"raw_affiliation_string":"Laboratori de Medicina Computacional, Unitat de Bioestad stica, Facultat de Medicina, Universitat Auto `noma de Barcelona, 08193 Bellaterra, Spain","institution_ids":["https://openalex.org/I71999127"]},{"raw_affiliation_string":"Laboratori de Medicina Computacional, Unitat de Bioestad\u0131 \u00b4stica, Facultat de Medicina, Universitat Auto `noma de Barcelona, 08193 Bellaterra, Spain","institution_ids":["https://openalex.org/I123044942"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052118441","display_name":"Xavier Deup\u00ed","orcid":"https://orcid.org/0000-0003-4572-9316"},"institutions":[{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]},{"id":"https://openalex.org/I123044942","display_name":"Universitat Aut\u00f2noma de Barcelona","ror":"https://ror.org/052g8jq94","country_code":"ES","type":"education","lineage":["https://openalex.org/I123044942"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Xavier Deupi","raw_affiliation_strings":["Laboratori de Medicina Computacional, Unitat de Bioestad stica, Facultat de Medicina, Universitat Auto `noma de Barcelona, 08193 Bellaterra, Spain","Laboratori de Medicina Computacional, Unitat de Bioestad\u0131 \u00b4stica, Facultat de Medicina, Universitat Auto `noma de Barcelona, 08193 Bellaterra, Spain"],"affiliations":[{"raw_affiliation_string":"Laboratori de Medicina Computacional, Unitat de Bioestad stica, Facultat de Medicina, Universitat Auto `noma de Barcelona, 08193 Bellaterra, Spain","institution_ids":["https://openalex.org/I71999127"]},{"raw_affiliation_string":"Laboratori de Medicina Computacional, Unitat de Bioestad\u0131 \u00b4stica, Facultat de Medicina, Universitat Auto `noma de Barcelona, 08193 Bellaterra, Spain","institution_ids":["https://openalex.org/I123044942"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5063381971"],"corresponding_institution_ids":["https://openalex.org/I115304662","https://openalex.org/I9617848"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":2.5413,"has_fulltext":true,"cited_by_count":78,"citation_normalized_percentile":{"value":0.89860753,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"29","issue":"13","first_page":"1589","last_page":"1592"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10407","display_name":"Lipid Membrane Structure and Behavior","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.7434156537055969},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.6939942836761475},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4779888987541199},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4714931845664978},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.27970707416534424},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.19795194268226624},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.12621602416038513}],"concepts":[{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.7434156537055969},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.6939942836761475},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4779888987541199},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4714931845664978},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.27970707416534424},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.19795194268226624},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.12621602416038513}],"mesh":[{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D017124","descriptor_name":"Conserved Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017124","descriptor_name":"Conserved Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017124","descriptor_name":"Conserved Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btt249","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt249","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/13/1589/18536395/btt249.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:23677941","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23677941","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:dspace.uvic.cat:10854/2307","is_oa":false,"landing_page_url":"http://hdl.handle.net/10854/2307","pdf_url":null,"source":{"id":"https://openalex.org/S4306401465","display_name":"Repositori Institucional De La Uvic (Universitat De Vic Universitat Central De Catalunya)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I115304662","host_organization_name":"Universitat de Vic - Universitat Central de Catalunya","host_organization_lineage":["https://openalex.org/I115304662"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:dora:psi_23471","is_oa":false,"landing_page_url":"https://www.dora.lib4ri.ch/psi/islandora/object/psi%3A23471","pdf_url":null,"source":{"id":"https://openalex.org/S4306402574","display_name":"DORA PSI (Paul Scherrer Institute)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2802229908","host_organization_name":"Paul Scherrer Institute","host_organization_lineage":["https://openalex.org/I2802229908"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btt249","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt249","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/13/1589/18536395/btt249.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6800000071525574,"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2148498717.pdf","grobid_xml":"https://content.openalex.org/works/W2148498717.grobid-xml"},"referenced_works_count":26,"referenced_works":["https://openalex.org/W1508885706","https://openalex.org/W1566695422","https://openalex.org/W1969836305","https://openalex.org/W1979223859","https://openalex.org/W1988578862","https://openalex.org/W2006719424","https://openalex.org/W2008887848","https://openalex.org/W2010508157","https://openalex.org/W2021722027","https://openalex.org/W2022428986","https://openalex.org/W2029306026","https://openalex.org/W2056402029","https://openalex.org/W2074370114","https://openalex.org/W2078481695","https://openalex.org/W2085277871","https://openalex.org/W2093615982","https://openalex.org/W2097775366","https://openalex.org/W2101220662","https://openalex.org/W2127177253","https://openalex.org/W2130479394","https://openalex.org/W2139754669","https://openalex.org/W2144998676","https://openalex.org/W2152678350","https://openalex.org/W2152770371","https://openalex.org/W2160983910","https://openalex.org/W2162274915"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W4234874385","https://openalex.org/W2390279801","https://openalex.org/W2323648130","https://openalex.org/W2358668433","https://openalex.org/W2157140558","https://openalex.org/W2376932109","https://openalex.org/W2378782423","https://openalex.org/W2001405890","https://openalex.org/W2382290278"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":11},{"year":2020,"cited_by_count":11},{"year":2019,"cited_by_count":9},{"year":2018,"cited_by_count":10},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":3}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
