{"id":"https://openalex.org/W2155201678","doi":"https://doi.org/10.1093/bioinformatics/btt092","title":"EBARDenovo: highly accurate <i>de novo</i> assembly of RNA-Seq with efficient chimera-detection","display_name":"EBARDenovo: highly accurate <i>de novo</i> assembly of RNA-Seq with efficient chimera-detection","publication_year":2013,"publication_date":"2013-03-01","ids":{"openalex":"https://openalex.org/W2155201678","doi":"https://doi.org/10.1093/bioinformatics/btt092","mag":"2155201678","pmid":"https://pubmed.ncbi.nlm.nih.gov/23457040"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btt092","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt092","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5004195387","display_name":"Hsueh\u2010Ting Chu","orcid":"https://orcid.org/0000-0003-0618-5598"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]},{"id":"https://openalex.org/I174748290","display_name":"Kainan University","ror":"https://ror.org/018p1hd91","country_code":"TW","type":"education","lineage":["https://openalex.org/I174748290"]}],"countries":["CA","TW"],"is_corresponding":false,"raw_author_name":"Hsueh-Ting Chu","raw_affiliation_strings":["1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan","institution_ids":["https://openalex.org/I174748290","https://openalex.org/I141945490","https://openalex.org/I16733864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019488638","display_name":"William Hsiao","orcid":"https://orcid.org/0000-0002-1342-4043"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]},{"id":"https://openalex.org/I174748290","display_name":"Kainan University","ror":"https://ror.org/018p1hd91","country_code":"TW","type":"education","lineage":["https://openalex.org/I174748290"]}],"countries":["CA","TW"],"is_corresponding":false,"raw_author_name":"William W. L. Hsiao","raw_affiliation_strings":["1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan","institution_ids":["https://openalex.org/I174748290","https://openalex.org/I141945490","https://openalex.org/I16733864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001695146","display_name":"Jen\u2010Chih Chen","orcid":"https://orcid.org/0000-0002-9246-1220"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]},{"id":"https://openalex.org/I174748290","display_name":"Kainan University","ror":"https://ror.org/018p1hd91","country_code":"TW","type":"education","lineage":["https://openalex.org/I174748290"]}],"countries":["CA","TW"],"is_corresponding":false,"raw_author_name":"Jen-Chih Chen","raw_affiliation_strings":["1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan","institution_ids":["https://openalex.org/I174748290","https://openalex.org/I141945490","https://openalex.org/I16733864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033698074","display_name":"Tze-Jung Yeh","orcid":null},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]},{"id":"https://openalex.org/I174748290","display_name":"Kainan University","ror":"https://ror.org/018p1hd91","country_code":"TW","type":"education","lineage":["https://openalex.org/I174748290"]}],"countries":["CA","TW"],"is_corresponding":false,"raw_author_name":"Tze-Jung Yeh","raw_affiliation_strings":["1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan","institution_ids":["https://openalex.org/I174748290","https://openalex.org/I141945490","https://openalex.org/I16733864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008173365","display_name":"Mong\u2010Hsun Tsai","orcid":"https://orcid.org/0000-0001-8777-5818"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]},{"id":"https://openalex.org/I174748290","display_name":"Kainan University","ror":"https://ror.org/018p1hd91","country_code":"TW","type":"education","lineage":["https://openalex.org/I174748290"]}],"countries":["CA","TW"],"is_corresponding":false,"raw_author_name":"Mong-Hsun Tsai","raw_affiliation_strings":["1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan","institution_ids":["https://openalex.org/I174748290","https://openalex.org/I141945490","https://openalex.org/I16733864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101549959","display_name":"Han Lin","orcid":"https://orcid.org/0000-0002-3446-5098"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]},{"id":"https://openalex.org/I174748290","display_name":"Kainan University","ror":"https://ror.org/018p1hd91","country_code":"TW","type":"education","lineage":["https://openalex.org/I174748290"]}],"countries":["CA","TW"],"is_corresponding":false,"raw_author_name":"Han Lin","raw_affiliation_strings":["1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan","institution_ids":["https://openalex.org/I174748290","https://openalex.org/I141945490","https://openalex.org/I16733864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007522210","display_name":"Yen-Wenn Liu","orcid":"https://orcid.org/0000-0002-1494-4999"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]},{"id":"https://openalex.org/I174748290","display_name":"Kainan University","ror":"https://ror.org/018p1hd91","country_code":"TW","type":"education","lineage":["https://openalex.org/I174748290"]}],"countries":["CA","TW"],"is_corresponding":false,"raw_author_name":"Yen-Wenn Liu","raw_affiliation_strings":["1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan","institution_ids":["https://openalex.org/I174748290","https://openalex.org/I141945490","https://openalex.org/I16733864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024600786","display_name":"Sheng\u2010An Lee","orcid":"https://orcid.org/0009-0008-7953-7877"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]},{"id":"https://openalex.org/I174748290","display_name":"Kainan University","ror":"https://ror.org/018p1hd91","country_code":"TW","type":"education","lineage":["https://openalex.org/I174748290"]}],"countries":["CA","TW"],"is_corresponding":false,"raw_author_name":"Sheng-An Lee","raw_affiliation_strings":["1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan","institution_ids":["https://openalex.org/I174748290","https://openalex.org/I141945490","https://openalex.org/I16733864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038569083","display_name":"Chien-Chang Chen","orcid":"https://orcid.org/0000-0001-6974-2422"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]},{"id":"https://openalex.org/I174748290","display_name":"Kainan University","ror":"https://ror.org/018p1hd91","country_code":"TW","type":"education","lineage":["https://openalex.org/I174748290"]}],"countries":["CA","TW"],"is_corresponding":false,"raw_author_name":"Chaur-Chin Chen","raw_affiliation_strings":["1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan","institution_ids":["https://openalex.org/I174748290","https://openalex.org/I141945490","https://openalex.org/I16733864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109253232","display_name":"Theresa T. H. Tsao","orcid":null},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]},{"id":"https://openalex.org/I174748290","display_name":"Kainan University","ror":"https://ror.org/018p1hd91","country_code":"TW","type":"education","lineage":["https://openalex.org/I174748290"]}],"countries":["CA","TW"],"is_corresponding":true,"raw_author_name":"Theresa T. H. Tsao","raw_affiliation_strings":["1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan","institution_ids":["https://openalex.org/I174748290","https://openalex.org/I141945490","https://openalex.org/I16733864"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5102154466","display_name":"Cheng\u2010Yan Kao","orcid":null},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]},{"id":"https://openalex.org/I174748290","display_name":"Kainan University","ror":"https://ror.org/018p1hd91","country_code":"TW","type":"education","lineage":["https://openalex.org/I174748290"]}],"countries":["CA","TW"],"is_corresponding":true,"raw_author_name":"Cheng-Yan Kao","raw_affiliation_strings":["1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Biomedical informatics, 2Department of Computer Science and Information Engineering, Asia University, Taichung 41354, Taiwan, 3BCCDC Public Health Microbiology & Reference Laboratory, Vancouver, British Columbia V5Z 4R4, Canada, 4Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia V5Z 4R4, Canada, 5Institute of Biotechnology, 6Graduate Institute of Biomedical Electronics and Bioinformatics, 7Department of Computer Science and Information Engineering, National Taiwan University, Taipei 10617, Taiwan, 8National Research Institute of Chinese Medicine, No. 155-1, Sec. 2, Li Nung Street Peitou, Taipei 11221, Taiwan, 9Department of Information Management, Kainan University, Taoyuan, 33857, Taiwan and 10Department of Computer Science, National Tsing Hua University, Hsinchu 30013, Taiwan","institution_ids":["https://openalex.org/I174748290","https://openalex.org/I141945490","https://openalex.org/I16733864"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5102154466","https://openalex.org/A5109253232"],"corresponding_institution_ids":["https://openalex.org/I141945490","https://openalex.org/I16733864","https://openalex.org/I174748290"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":3.8884,"has_fulltext":false,"cited_by_count":34,"citation_normalized_percentile":{"value":0.94370006,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"29","issue":"8","first_page":"1004","last_page":"1010"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9501000046730042,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9501000046730042,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.019300000742077827,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.002899999963119626,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/de-bruijn-graph","display_name":"De Bruijn graph","score":0.8795690536499023},{"id":"https://openalex.org/keywords/sequence-assembly","display_name":"Sequence assembly","score":0.6341577768325806},{"id":"https://openalex.org/keywords/de-bruijn-sequence","display_name":"De Bruijn sequence","score":0.5823987126350403},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5707311630249023},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.563627302646637},{"id":"https://openalex.org/keywords/de-novo-transcriptome-assembly","display_name":"De novo transcriptome assembly","score":0.5414460301399231},{"id":"https://openalex.org/keywords/amplicon","display_name":"Amplicon","score":0.5402533411979675},{"id":"https://openalex.org/keywords/rna-seq","display_name":"RNA-Seq","score":0.49991607666015625},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.47805291414260864},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.46628427505493164},{"id":"https://openalex.org/keywords/chimera","display_name":"Chimera (genetics)","score":0.41950908303260803},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3781159222126007},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.35989367961883545},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2522696256637573},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2509167492389679},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.2492828667163849},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.22782129049301147},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.10388028621673584},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.10139906406402588},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.10061559081077576},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.09001922607421875},{"id":"https://openalex.org/keywords/polymerase-chain-reaction","display_name":"Polymerase chain reaction","score":0.07818692922592163}],"concepts":[{"id":"https://openalex.org/C20218877","wikidata":"https://www.wikidata.org/wiki/Q3066095","display_name":"De Bruijn graph","level":3,"score":0.8795690536499023},{"id":"https://openalex.org/C18949551","wikidata":"https://www.wikidata.org/wiki/Q740578","display_name":"Sequence assembly","level":5,"score":0.6341577768325806},{"id":"https://openalex.org/C170320093","wikidata":"https://www.wikidata.org/wiki/Q1953457","display_name":"De Bruijn sequence","level":2,"score":0.5823987126350403},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5707311630249023},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.563627302646637},{"id":"https://openalex.org/C50489715","wikidata":"https://www.wikidata.org/wiki/Q5244960","display_name":"De novo transcriptome assembly","level":5,"score":0.5414460301399231},{"id":"https://openalex.org/C8185291","wikidata":"https://www.wikidata.org/wiki/Q2844457","display_name":"Amplicon","level":4,"score":0.5402533411979675},{"id":"https://openalex.org/C107397762","wikidata":"https://www.wikidata.org/wiki/Q2542347","display_name":"RNA-Seq","level":5,"score":0.49991607666015625},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.47805291414260864},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.46628427505493164},{"id":"https://openalex.org/C30278631","wikidata":"https://www.wikidata.org/wiki/Q281721","display_name":"Chimera (genetics)","level":3,"score":0.41950908303260803},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3781159222126007},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.35989367961883545},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2522696256637573},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2509167492389679},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.2492828667163849},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.22782129049301147},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.10388028621673584},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.10139906406402588},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.10061559081077576},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.09001922607421875},{"id":"https://openalex.org/C49105822","wikidata":"https://www.wikidata.org/wiki/Q176996","display_name":"Polymerase chain reaction","level":3,"score":0.07818692922592163}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012091","descriptor_name":"Repetitive Sequences, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012091","descriptor_name":"Repetitive Sequences, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012091","descriptor_name":"Repetitive Sequences, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btt092","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt092","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:23457040","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23457040","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":26,"referenced_works":["https://openalex.org/W1949908375","https://openalex.org/W2009458183","https://openalex.org/W2010888033","https://openalex.org/W2034226898","https://openalex.org/W2042160423","https://openalex.org/W2095267560","https://openalex.org/W2106678197","https://openalex.org/W2112888168","https://openalex.org/W2114703458","https://openalex.org/W2116027790","https://openalex.org/W2117242586","https://openalex.org/W2124887618","https://openalex.org/W2124985265","https://openalex.org/W2126419817","https://openalex.org/W2136651963","https://openalex.org/W2136879569","https://openalex.org/W2142749416","https://openalex.org/W2143593381","https://openalex.org/W2150483253","https://openalex.org/W2154431984","https://openalex.org/W2156274673","https://openalex.org/W2156841387","https://openalex.org/W2160969485","https://openalex.org/W4213387068","https://openalex.org/W4238011601","https://openalex.org/W6678571078"],"related_works":["https://openalex.org/W2991626973","https://openalex.org/W4387083702","https://openalex.org/W4318940746","https://openalex.org/W3021160691","https://openalex.org/W3157557088","https://openalex.org/W4206729893","https://openalex.org/W2048783574","https://openalex.org/W2133531097","https://openalex.org/W2359778323","https://openalex.org/W2926358864"],"abstract_inverted_index":{"MOTIVATION:":[0],"High-accuracy":[1],"de":[2,19,85],"novo":[3,20],"assembly":[4,21,57,72],"of":[5,43,55,71,108],"the":[6,41,53,77,81],"short":[7],"sequencing":[8,60],"reads":[9,46],"from":[10,59],"RNA-Seq":[11,48,56],"technology":[12],"is":[13,76,96,106],"very":[14],"challenging.":[15],"We":[16],"introduce":[17],"a":[18,69],"algorithm,":[22],"EBARDenovo,":[23],"which":[24],"stands":[25],"for":[26,110],"Extension,":[27],"Bridging":[28],"And":[29],"Repeat-sensing":[30],"Denovo.":[31],"This":[32,100],"algorithm":[33,75],"uses":[34],"an":[35],"efficient":[36],"chimera-detection":[37],"function":[38],"to":[39],"abrogate":[40],"effect":[42],"aberrant":[44,65],"chimeric":[45,66],"in":[47],"data.":[49],"RESULTS:":[50],"EBARDenovo":[51,95],"resolves":[52],"complications":[54],"arising":[58],"errors,":[61],"repetitive":[62],"sequences":[63],"and":[64,90],"amplicons.":[67],"In":[68],"series":[70],"experiments,":[73],"our":[74],"most":[78],"accurate":[79],"among":[80],"examined":[82],"programs,":[83],"including":[84],"Bruijn":[86],"graph":[87],"assemblers,":[88],"Trinity":[89],"Oases.":[91],"AVAILABILITY":[92],"AND":[93],"IMPLEMENTATION:":[94],"available":[97,119],"at":[98,120],"http://ebardenovo.sourceforge.net/.":[99],"software":[101],"package":[102],"(with":[103],"patent":[104],"pending)":[105],"free":[107],"charge":[109],"academic":[111],"use":[112],"only.":[113],"SUPPLEMENTARY":[114],"INFORMATION:":[115],"Supplementary":[116],"data":[117],"are":[118],"Bioinformatics":[121],"online.":[122]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":8},{"year":2015,"cited_by_count":10},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":3}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2016-06-24T00:00:00"}