{"id":"https://openalex.org/W2156049845","doi":"https://doi.org/10.1093/bioinformatics/btt047","title":"Filtering duplicate reads from 454 pyrosequencing data","display_name":"Filtering duplicate reads from 454 pyrosequencing data","publication_year":2013,"publication_date":"2013-02-01","ids":{"openalex":"https://openalex.org/W2156049845","doi":"https://doi.org/10.1093/bioinformatics/btt047","mag":"2156049845","pmid":"https://pubmed.ncbi.nlm.nih.gov/23376350"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btt047","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt047","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/7/830/49060869/bioinformatics_29_7_830.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/29/7/830/49060869/bioinformatics_29_7_830.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016699956","display_name":"Susanne Balzer","orcid":null},"institutions":[{"id":"https://openalex.org/I2802153510","display_name":"Norwegian Institute of Marine Research","ror":"https://ror.org/05vg74d16","country_code":"NO","type":"facility","lineage":["https://openalex.org/I2802153510","https://openalex.org/I4210116418","https://openalex.org/I4210149801"]},{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Susanne Balzer","raw_affiliation_strings":["1 Norwegian Marine Data Centre, Institute of Marine Research, P.O. Box 1870, N-5817 Bergen, Norway, 2Department of Informatics, University of Bergen, P.O. Box 7803, N-5020 Bergen, Norway, 3Department of Molecular Biotechnology and Functional Genomics, University of Applied Sciences Wildau, Bahnhofstra\u00dfe 1, D-15745 Wildau, Germany and 4Computational Biology Unit, Uni Computing, Thorm\u00f8hlensgate 55, N-5008 Bergen, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Norwegian Marine Data Centre, Institute of Marine Research, P.O. Box 1870, N-5817 Bergen, Norway, 2Department of Informatics, University of Bergen, P.O. Box 7803, N-5020 Bergen, Norway, 3Department of Molecular Biotechnology and Functional Genomics, University of Applied Sciences Wildau, Bahnhofstra\u00dfe 1, D-15745 Wildau, Germany and 4Computational Biology Unit, Uni Computing, Thorm\u00f8hlensgate 55, N-5008 Bergen, Norway","institution_ids":["https://openalex.org/I4432739","https://openalex.org/I2802153510"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061545123","display_name":"Ketil Malde","orcid":"https://orcid.org/0000-0001-7381-1849"},"institutions":[{"id":"https://openalex.org/I2802153510","display_name":"Norwegian Institute of Marine Research","ror":"https://ror.org/05vg74d16","country_code":"NO","type":"facility","lineage":["https://openalex.org/I2802153510","https://openalex.org/I4210116418","https://openalex.org/I4210149801"]},{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":true,"raw_author_name":"Ketil Malde","raw_affiliation_strings":["1 Norwegian Marine Data Centre, Institute of Marine Research, P.O. Box 1870, N-5817 Bergen, Norway, 2Department of Informatics, University of Bergen, P.O. Box 7803, N-5020 Bergen, Norway, 3Department of Molecular Biotechnology and Functional Genomics, University of Applied Sciences Wildau, Bahnhofstra\u00dfe 1, D-15745 Wildau, Germany and 4Computational Biology Unit, Uni Computing, Thorm\u00f8hlensgate 55, N-5008 Bergen, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Norwegian Marine Data Centre, Institute of Marine Research, P.O. Box 1870, N-5817 Bergen, Norway, 2Department of Informatics, University of Bergen, P.O. Box 7803, N-5020 Bergen, Norway, 3Department of Molecular Biotechnology and Functional Genomics, University of Applied Sciences Wildau, Bahnhofstra\u00dfe 1, D-15745 Wildau, Germany and 4Computational Biology Unit, Uni Computing, Thorm\u00f8hlensgate 55, N-5008 Bergen, Norway","institution_ids":["https://openalex.org/I4432739","https://openalex.org/I2802153510"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037640562","display_name":"Markus A. Grohme","orcid":"https://orcid.org/0000-0002-4250-5600"},"institutions":[{"id":"https://openalex.org/I2802153510","display_name":"Norwegian Institute of Marine Research","ror":"https://ror.org/05vg74d16","country_code":"NO","type":"facility","lineage":["https://openalex.org/I2802153510","https://openalex.org/I4210116418","https://openalex.org/I4210149801"]},{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Markus A. Grohme","raw_affiliation_strings":["1 Norwegian Marine Data Centre, Institute of Marine Research, P.O. Box 1870, N-5817 Bergen, Norway, 2Department of Informatics, University of Bergen, P.O. Box 7803, N-5020 Bergen, Norway, 3Department of Molecular Biotechnology and Functional Genomics, University of Applied Sciences Wildau, Bahnhofstra\u00dfe 1, D-15745 Wildau, Germany and 4Computational Biology Unit, Uni Computing, Thorm\u00f8hlensgate 55, N-5008 Bergen, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Norwegian Marine Data Centre, Institute of Marine Research, P.O. Box 1870, N-5817 Bergen, Norway, 2Department of Informatics, University of Bergen, P.O. Box 7803, N-5020 Bergen, Norway, 3Department of Molecular Biotechnology and Functional Genomics, University of Applied Sciences Wildau, Bahnhofstra\u00dfe 1, D-15745 Wildau, Germany and 4Computational Biology Unit, Uni Computing, Thorm\u00f8hlensgate 55, N-5008 Bergen, Norway","institution_ids":["https://openalex.org/I4432739","https://openalex.org/I2802153510"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5012964587","display_name":"Inge Jonassen","orcid":"https://orcid.org/0000-0003-4110-0748"},"institutions":[{"id":"https://openalex.org/I2802153510","display_name":"Norwegian Institute of Marine Research","ror":"https://ror.org/05vg74d16","country_code":"NO","type":"facility","lineage":["https://openalex.org/I2802153510","https://openalex.org/I4210116418","https://openalex.org/I4210149801"]},{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Inge Jonassen","raw_affiliation_strings":["1 Norwegian Marine Data Centre, Institute of Marine Research, P.O. Box 1870, N-5817 Bergen, Norway, 2Department of Informatics, University of Bergen, P.O. Box 7803, N-5020 Bergen, Norway, 3Department of Molecular Biotechnology and Functional Genomics, University of Applied Sciences Wildau, Bahnhofstra\u00dfe 1, D-15745 Wildau, Germany and 4Computational Biology Unit, Uni Computing, Thorm\u00f8hlensgate 55, N-5008 Bergen, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Norwegian Marine Data Centre, Institute of Marine Research, P.O. Box 1870, N-5817 Bergen, Norway, 2Department of Informatics, University of Bergen, P.O. Box 7803, N-5020 Bergen, Norway, 3Department of Molecular Biotechnology and Functional Genomics, University of Applied Sciences Wildau, Bahnhofstra\u00dfe 1, D-15745 Wildau, Germany and 4Computational Biology Unit, Uni Computing, Thorm\u00f8hlensgate 55, N-5008 Bergen, Norway","institution_ids":["https://openalex.org/I4432739","https://openalex.org/I2802153510"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5061545123"],"corresponding_institution_ids":["https://openalex.org/I2802153510","https://openalex.org/I4432739"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":2.0649,"has_fulltext":true,"cited_by_count":25,"citation_normalized_percentile":{"value":0.87190884,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"29","issue":"7","first_page":"830","last_page":"836"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.848800003528595,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.848800003528595,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12561","display_name":"bioluminescence and chemiluminescence research","score":0.03310000151395798,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11879","display_name":"Protist diversity and phylogeny","score":0.012199999764561653,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pyrosequencing","display_name":"Pyrosequencing","score":0.9072031378746033},{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.6397316455841064},{"id":"https://openalex.org/keywords/sanger-sequencing","display_name":"Sanger sequencing","score":0.6380951404571533},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.49136248230934143},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.4531746506690979},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.44308027625083923},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4231695830821991},{"id":"https://openalex.org/keywords/sequence-assembly","display_name":"Sequence assembly","score":0.4208833873271942},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.40449896454811096},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.22972583770751953},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09401354193687439}],"concepts":[{"id":"https://openalex.org/C125009961","wikidata":"https://www.wikidata.org/wiki/Q2342248","display_name":"Pyrosequencing","level":3,"score":0.9072031378746033},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.6397316455841064},{"id":"https://openalex.org/C76818968","wikidata":"https://www.wikidata.org/wiki/Q181940","display_name":"Sanger sequencing","level":4,"score":0.6380951404571533},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.49136248230934143},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.4531746506690979},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.44308027625083923},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4231695830821991},{"id":"https://openalex.org/C18949551","wikidata":"https://www.wikidata.org/wiki/Q740578","display_name":"Sequence assembly","level":5,"score":0.4208833873271942},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.40449896454811096},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.22972583770751953},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09401354193687439},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/btt047","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt047","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/7/830/49060869/bioinformatics_29_7_830.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:23376350","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23376350","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:bora.uib.no:1956/7458","is_oa":true,"landing_page_url":"https://hdl.handle.net/1956/7458","pdf_url":null,"source":{"id":"https://openalex.org/S4306401716","display_name":"Duo Research Archive (University of Oslo)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I184942183","host_organization_name":"University of Oslo","host_organization_lineage":["https://openalex.org/I184942183"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:europepmc.org:2602854","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3605598","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:kobv.de-opus4-th-wildau:608","is_oa":true,"landing_page_url":"https://nbn-resolving.org/urn:nbn:de:kobv:526-opus4-6080","pdf_url":null,"source":{"id":"https://openalex.org/S4306400195","display_name":"TH Wildau (Technical University of Applied Sciences Wildau)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I38517508","host_organization_name":"Technical University of Applied Sciences Wildau","host_organization_lineage":["https://openalex.org/I38517508"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 29, 7, S. 830-836","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btt047","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt047","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/7/830/49060869/bioinformatics_29_7_830.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320323299","display_name":"Norges Forskningsr\u00e5d","ror":"https://ror.org/00epmv149"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2156049845.pdf","grobid_xml":"https://content.openalex.org/works/W2156049845.grobid-xml"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W1521911978","https://openalex.org/W1968957319","https://openalex.org/W1980355960","https://openalex.org/W1985726486","https://openalex.org/W1986473212","https://openalex.org/W1987545661","https://openalex.org/W2000072710","https://openalex.org/W2001002816","https://openalex.org/W2006893094","https://openalex.org/W2011637810","https://openalex.org/W2014055319","https://openalex.org/W2022217979","https://openalex.org/W2037532428","https://openalex.org/W2055185462","https://openalex.org/W2074588113","https://openalex.org/W2080593269","https://openalex.org/W2080958324","https://openalex.org/W2087671769","https://openalex.org/W2088170018","https://openalex.org/W2090087224","https://openalex.org/W2106308757","https://openalex.org/W2108166985","https://openalex.org/W2108234281","https://openalex.org/W2114765236","https://openalex.org/W2119284644","https://openalex.org/W2119923823","https://openalex.org/W2121016876","https://openalex.org/W2128114769","https://openalex.org/W2129067616","https://openalex.org/W2130077037","https://openalex.org/W2138190969","https://openalex.org/W2138270253","https://openalex.org/W2147772097","https://openalex.org/W2150914285","https://openalex.org/W2153993827","https://openalex.org/W2156125289","https://openalex.org/W2156330112","https://openalex.org/W2160681728","https://openalex.org/W2161454753","https://openalex.org/W2163236435","https://openalex.org/W6672966426"],"related_works":["https://openalex.org/W2509584793","https://openalex.org/W1979980342","https://openalex.org/W2166395958","https://openalex.org/W3157413657","https://openalex.org/W2085631282","https://openalex.org/W2778510927","https://openalex.org/W2332795043","https://openalex.org/W1994928153","https://openalex.org/W2099006507","https://openalex.org/W2151671981"],"abstract_inverted_index":{"MOTIVATION:":[0],"Throughout":[1],"the":[2,30,56,92,102,154],"recent":[3],"years,":[4],"454":[5,47,127],"pyrosequencing":[6,48],"has":[7],"emerged":[8],"as":[9],"an":[10,108,145],"efficient":[11],"alternative":[12],"to":[13,36,73],"traditional":[14],"Sanger":[15],"sequencing":[16,26,37,76],"and":[17,27,39,49,60,78],"is":[18,33,83,150],"widely":[19],"used":[20],"in":[21,46,55],"both":[22,75],"de":[23],"novo":[24],"whole-genome":[25],"metagenomics.":[28],"Especially":[29],"latter":[31],"application":[32],"extremely":[34],"sensitive":[35],"errors":[38],"artificially":[40],"duplicated":[41],"reads.":[42],"Both":[43],"are":[44,68,164],"common":[45],"can":[50],"create":[51],"a":[52,63,111,142],"strong":[53],"bias":[54],"estimation":[57],"of":[58,62,123],"diversity":[59],"composition":[61],"sample.":[64],"To":[65],"date,":[66],"there":[67],"several":[69],"tools":[70],"that":[71],"aim":[72],"remove":[74],"noise":[77],"duplicates.":[79],"Nevertheless,":[80],"duplicate":[81,114],"removal":[82,115],"often":[84],"based":[85],"on":[86,91,126],"nucleotide":[87],"sequences":[88],"rather":[89],"than":[90],"underlying":[93],"flow":[94,118,128],"values,":[95],"which":[96],"contain":[97],"additional":[98],"information.":[99],"RESULTS:":[100],"With":[101],"novel":[103],"tool":[104],"JATAC,":[105],"we":[106,131,140],"present":[107],"approach":[109],"towards":[110],"more":[112],"accurate":[113],"by":[116],"analysing":[117],"values":[119],"directly.":[120],"Making":[121],"use":[122],"previous":[124],"findings":[125],"data":[129,163],"characteristics,":[130],"combine":[132],"read":[133],"clustering":[134],"with":[135,144],"Bayesian":[136],"distance":[137],"measures.":[138],"Finally,":[139],"provide":[141],"benchmark":[143],"existing":[146],"algorithm.":[147],"AVAILABILITY:":[148],"JATAC":[149],"freely":[151],"available":[152,165],"under":[153],"General":[155],"Public":[156],"License":[157],"from":[158],"http://malde.org/ketil/jatac/.":[159],"SUPPLEMENTARY":[160],"INFORMATION:":[161],"Supplementary":[162],"at":[166],"Bioinformatics":[167],"online.":[168]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":2}],"updated_date":"2026-06-16T07:32:37.131356","created_date":"2025-10-10T00:00:00"}
