{"id":"https://openalex.org/W2171338061","doi":"https://doi.org/10.1093/bioinformatics/btt025","title":"StatAlign 2.0: combining statistical alignment with RNA secondary structure prediction","display_name":"StatAlign 2.0: combining statistical alignment with RNA secondary structure prediction","publication_year":2013,"publication_date":"2013-01-17","ids":{"openalex":"https://openalex.org/W2171338061","doi":"https://doi.org/10.1093/bioinformatics/btt025","mag":"2171338061","pmid":"https://pubmed.ncbi.nlm.nih.gov/23335014"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btt025","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt025","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/5/654/16919585/btt025.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/29/5/654/16919585/btt025.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5081198682","display_name":"Preeti Arunapuram","orcid":null},"institutions":[{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]},{"id":"https://openalex.org/I204337017","display_name":"Aarhus University","ror":"https://ror.org/01aj84f44","country_code":"DK","type":"education","lineage":["https://openalex.org/I204337017"]},{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]},{"id":"https://openalex.org/I123185442","display_name":"Reykjav\u00edk University","ror":"https://ror.org/05d2kyx68","country_code":"IS","type":"education","lineage":["https://openalex.org/I123185442"]},{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["DK","GB","IS","US","ZA"],"is_corresponding":false,"raw_author_name":"Preeti Arunapuram","raw_affiliation_strings":["1 Department of Computer Science, University of North Carolina at Chapel Hill, NC 27599, USA, 2Department of Mathematics, Reykjavik University, Reykjavik, Iceland, 3Department of Clinical Laboratory Sciences, University of Cape Town, Rondebosch, Cape Town, 7701, South Africa, 4Department of Statistics, 1 South Parks Road, University of Oxford, OX1 3TG, UK and 5Bioinformatics Research Centre, Aarhus University, C.F. M\u00f8llers All\u00e9 8, DK-8000 Aarhus C, Denmark"],"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, University of North Carolina at Chapel Hill, NC 27599, USA, 2Department of Mathematics, Reykjavik University, Reykjavik, Iceland, 3Department of Clinical Laboratory Sciences, University of Cape Town, Rondebosch, Cape Town, 7701, South Africa, 4Department of Statistics, 1 South Parks Road, University of Oxford, OX1 3TG, UK and 5Bioinformatics Research Centre, Aarhus University, C.F. M\u00f8llers All\u00e9 8, DK-8000 Aarhus C, Denmark","institution_ids":["https://openalex.org/I123185442","https://openalex.org/I114027177","https://openalex.org/I157614274","https://openalex.org/I40120149","https://openalex.org/I204337017"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057997276","display_name":"Ingolfur Edvardsson","orcid":null},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]},{"id":"https://openalex.org/I204337017","display_name":"Aarhus University","ror":"https://ror.org/01aj84f44","country_code":"DK","type":"education","lineage":["https://openalex.org/I204337017"]},{"id":"https://openalex.org/I123185442","display_name":"Reykjav\u00edk University","ror":"https://ror.org/05d2kyx68","country_code":"IS","type":"education","lineage":["https://openalex.org/I123185442"]},{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]},{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]}],"countries":["DK","GB","IS","US","ZA"],"is_corresponding":false,"raw_author_name":"Ingolfur Edvardsson","raw_affiliation_strings":["1 Department of Computer Science, University of North Carolina at Chapel Hill, NC 27599, USA, 2Department of Mathematics, Reykjavik University, Reykjavik, Iceland, 3Department of Clinical Laboratory Sciences, University of Cape Town, Rondebosch, Cape Town, 7701, South Africa, 4Department of Statistics, 1 South Parks Road, University of Oxford, OX1 3TG, UK and 5Bioinformatics Research Centre, Aarhus University, C.F. M\u00f8llers All\u00e9 8, DK-8000 Aarhus C, Denmark"],"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, University of North Carolina at Chapel Hill, NC 27599, USA, 2Department of Mathematics, Reykjavik University, Reykjavik, Iceland, 3Department of Clinical Laboratory Sciences, University of Cape Town, Rondebosch, Cape Town, 7701, South Africa, 4Department of Statistics, 1 South Parks Road, University of Oxford, OX1 3TG, UK and 5Bioinformatics Research Centre, Aarhus University, C.F. M\u00f8llers All\u00e9 8, DK-8000 Aarhus C, Denmark","institution_ids":["https://openalex.org/I123185442","https://openalex.org/I114027177","https://openalex.org/I157614274","https://openalex.org/I40120149","https://openalex.org/I204337017"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013116981","display_name":"Michael Golden","orcid":"https://orcid.org/0000-0002-3653-8019"},"institutions":[{"id":"https://openalex.org/I123185442","display_name":"Reykjav\u00edk University","ror":"https://ror.org/05d2kyx68","country_code":"IS","type":"education","lineage":["https://openalex.org/I123185442"]},{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]},{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]},{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]},{"id":"https://openalex.org/I204337017","display_name":"Aarhus University","ror":"https://ror.org/01aj84f44","country_code":"DK","type":"education","lineage":["https://openalex.org/I204337017"]}],"countries":["DK","GB","IS","US","ZA"],"is_corresponding":false,"raw_author_name":"Michael Golden","raw_affiliation_strings":["1 Department of Computer Science, University of North Carolina at Chapel Hill, NC 27599, USA, 2Department of Mathematics, Reykjavik University, Reykjavik, Iceland, 3Department of Clinical Laboratory Sciences, University of Cape Town, Rondebosch, Cape Town, 7701, South Africa, 4Department of Statistics, 1 South Parks Road, University of Oxford, OX1 3TG, UK and 5Bioinformatics Research Centre, Aarhus University, C.F. M\u00f8llers All\u00e9 8, DK-8000 Aarhus C, Denmark"],"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, University of North Carolina at Chapel Hill, NC 27599, USA, 2Department of Mathematics, Reykjavik University, Reykjavik, Iceland, 3Department of Clinical Laboratory Sciences, University of Cape Town, Rondebosch, Cape Town, 7701, South Africa, 4Department of Statistics, 1 South Parks Road, University of Oxford, OX1 3TG, UK and 5Bioinformatics Research Centre, Aarhus University, C.F. M\u00f8llers All\u00e9 8, DK-8000 Aarhus C, Denmark","institution_ids":["https://openalex.org/I123185442","https://openalex.org/I114027177","https://openalex.org/I157614274","https://openalex.org/I40120149","https://openalex.org/I204337017"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101609265","display_name":"James W. Anderson","orcid":"https://orcid.org/0000-0001-9118-4789"},"institutions":[{"id":"https://openalex.org/I123185442","display_name":"Reykjav\u00edk University","ror":"https://ror.org/05d2kyx68","country_code":"IS","type":"education","lineage":["https://openalex.org/I123185442"]},{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]},{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]},{"id":"https://openalex.org/I204337017","display_name":"Aarhus University","ror":"https://ror.org/01aj84f44","country_code":"DK","type":"education","lineage":["https://openalex.org/I204337017"]},{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]}],"countries":["DK","GB","IS","US","ZA"],"is_corresponding":false,"raw_author_name":"James W. J. Anderson","raw_affiliation_strings":["1 Department of Computer Science, University of North Carolina at Chapel Hill, NC 27599, USA, 2Department of Mathematics, Reykjavik University, Reykjavik, Iceland, 3Department of Clinical Laboratory Sciences, University of Cape Town, Rondebosch, Cape Town, 7701, South Africa, 4Department of Statistics, 1 South Parks Road, University of Oxford, OX1 3TG, UK and 5Bioinformatics Research Centre, Aarhus University, C.F. M\u00f8llers All\u00e9 8, DK-8000 Aarhus C, Denmark"],"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, University of North Carolina at Chapel Hill, NC 27599, USA, 2Department of Mathematics, Reykjavik University, Reykjavik, Iceland, 3Department of Clinical Laboratory Sciences, University of Cape Town, Rondebosch, Cape Town, 7701, South Africa, 4Department of Statistics, 1 South Parks Road, University of Oxford, OX1 3TG, UK and 5Bioinformatics Research Centre, Aarhus University, C.F. M\u00f8llers All\u00e9 8, DK-8000 Aarhus C, Denmark","institution_ids":["https://openalex.org/I123185442","https://openalex.org/I114027177","https://openalex.org/I157614274","https://openalex.org/I40120149","https://openalex.org/I204337017"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031360521","display_name":"Adam M. Novak","orcid":"https://orcid.org/0000-0001-5828-047X"},"institutions":[{"id":"https://openalex.org/I123185442","display_name":"Reykjav\u00edk University","ror":"https://ror.org/05d2kyx68","country_code":"IS","type":"education","lineage":["https://openalex.org/I123185442"]},{"id":"https://openalex.org/I204337017","display_name":"Aarhus University","ror":"https://ror.org/01aj84f44","country_code":"DK","type":"education","lineage":["https://openalex.org/I204337017"]},{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]},{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]},{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]}],"countries":["DK","GB","IS","US","ZA"],"is_corresponding":true,"raw_author_name":"\u00c1d\u00e1m Nov\u00e1k","raw_affiliation_strings":["1 Department of Computer Science, University of North Carolina at Chapel Hill, NC 27599, USA, 2Department of Mathematics, Reykjavik University, Reykjavik, Iceland, 3Department of Clinical Laboratory Sciences, University of Cape Town, Rondebosch, Cape Town, 7701, South Africa, 4Department of Statistics, 1 South Parks Road, University of Oxford, OX1 3TG, UK and 5Bioinformatics Research Centre, Aarhus University, C.F. M\u00f8llers All\u00e9 8, DK-8000 Aarhus C, Denmark"],"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, University of North Carolina at Chapel Hill, NC 27599, USA, 2Department of Mathematics, Reykjavik University, Reykjavik, Iceland, 3Department of Clinical Laboratory Sciences, University of Cape Town, Rondebosch, Cape Town, 7701, South Africa, 4Department of Statistics, 1 South Parks Road, University of Oxford, OX1 3TG, UK and 5Bioinformatics Research Centre, Aarhus University, C.F. M\u00f8llers All\u00e9 8, DK-8000 Aarhus C, Denmark","institution_ids":["https://openalex.org/I123185442","https://openalex.org/I114027177","https://openalex.org/I157614274","https://openalex.org/I40120149","https://openalex.org/I204337017"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009619508","display_name":"Zsuzsanna S\u00fck\u00f6sd","orcid":null},"institutions":[{"id":"https://openalex.org/I204337017","display_name":"Aarhus University","ror":"https://ror.org/01aj84f44","country_code":"DK","type":"education","lineage":["https://openalex.org/I204337017"]},{"id":"https://openalex.org/I123185442","display_name":"Reykjav\u00edk University","ror":"https://ror.org/05d2kyx68","country_code":"IS","type":"education","lineage":["https://openalex.org/I123185442"]},{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]},{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]},{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]}],"countries":["DK","GB","IS","US","ZA"],"is_corresponding":false,"raw_author_name":"Zsuzsanna S\u00fck\u00f6sd","raw_affiliation_strings":["1 Department of Computer Science, University of North Carolina at Chapel Hill, NC 27599, USA, 2Department of Mathematics, Reykjavik University, Reykjavik, Iceland, 3Department of Clinical Laboratory Sciences, University of Cape Town, Rondebosch, Cape Town, 7701, South Africa, 4Department of Statistics, 1 South Parks Road, University of Oxford, OX1 3TG, UK and 5Bioinformatics Research Centre, Aarhus University, C.F. M\u00f8llers All\u00e9 8, DK-8000 Aarhus C, Denmark"],"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, University of North Carolina at Chapel Hill, NC 27599, USA, 2Department of Mathematics, Reykjavik University, Reykjavik, Iceland, 3Department of Clinical Laboratory Sciences, University of Cape Town, Rondebosch, Cape Town, 7701, South Africa, 4Department of Statistics, 1 South Parks Road, University of Oxford, OX1 3TG, UK and 5Bioinformatics Research Centre, Aarhus University, C.F. M\u00f8llers All\u00e9 8, DK-8000 Aarhus C, Denmark","institution_ids":["https://openalex.org/I123185442","https://openalex.org/I114027177","https://openalex.org/I157614274","https://openalex.org/I40120149","https://openalex.org/I204337017"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5079496228","display_name":"Jotun Hein","orcid":"https://orcid.org/0000-0002-8100-0824"},"institutions":[{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]},{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]},{"id":"https://openalex.org/I204337017","display_name":"Aarhus University","ror":"https://ror.org/01aj84f44","country_code":"DK","type":"education","lineage":["https://openalex.org/I204337017"]},{"id":"https://openalex.org/I123185442","display_name":"Reykjav\u00edk University","ror":"https://ror.org/05d2kyx68","country_code":"IS","type":"education","lineage":["https://openalex.org/I123185442"]},{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]}],"countries":["DK","GB","IS","US","ZA"],"is_corresponding":false,"raw_author_name":"Jotun Hein","raw_affiliation_strings":["1 Department of Computer Science, University of North Carolina at Chapel Hill, NC 27599, USA, 2Department of Mathematics, Reykjavik University, Reykjavik, Iceland, 3Department of Clinical Laboratory Sciences, University of Cape Town, Rondebosch, Cape Town, 7701, South Africa, 4Department of Statistics, 1 South Parks Road, University of Oxford, OX1 3TG, UK and 5Bioinformatics Research Centre, Aarhus University, C.F. M\u00f8llers All\u00e9 8, DK-8000 Aarhus C, Denmark"],"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science, University of North Carolina at Chapel Hill, NC 27599, USA, 2Department of Mathematics, Reykjavik University, Reykjavik, Iceland, 3Department of Clinical Laboratory Sciences, University of Cape Town, Rondebosch, Cape Town, 7701, South Africa, 4Department of Statistics, 1 South Parks Road, University of Oxford, OX1 3TG, UK and 5Bioinformatics Research Centre, Aarhus University, C.F. M\u00f8llers All\u00e9 8, DK-8000 Aarhus C, Denmark","institution_ids":["https://openalex.org/I123185442","https://openalex.org/I114027177","https://openalex.org/I157614274","https://openalex.org/I40120149","https://openalex.org/I204337017"]}]}],"institutions":[],"countries_distinct_count":5,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5031360521"],"corresponding_institution_ids":["https://openalex.org/I114027177","https://openalex.org/I123185442","https://openalex.org/I157614274","https://openalex.org/I204337017","https://openalex.org/I40120149"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.1978,"has_fulltext":true,"cited_by_count":16,"citation_normalized_percentile":{"value":0.79225029,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"29","issue":"5","first_page":"654","last_page":"655"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.590671956539154},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.4705002009868622},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4571390748023987},{"id":"https://openalex.org/keywords/statistical-analysis","display_name":"Statistical analysis","score":0.45189523696899414},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3695119321346283},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3312954902648926},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.219529926776886},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1940840780735016},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.19313323497772217},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1546247899532318},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.07809582352638245}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.590671956539154},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.4705002009868622},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4571390748023987},{"id":"https://openalex.org/C2986587452","wikidata":"https://www.wikidata.org/wiki/Q938438","display_name":"Statistical analysis","level":2,"score":0.45189523696899414},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3695119321346283},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3312954902648926},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.219529926776886},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1940840780735016},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.19313323497772217},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1546247899532318},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.07809582352638245}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008390","descriptor_name":"Markov Chains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008390","descriptor_name":"Markov Chains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008390","descriptor_name":"Markov Chains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008390","descriptor_name":"Markov Chains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013816","descriptor_name":"Thermodynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013816","descriptor_name":"Thermodynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013816","descriptor_name":"Thermodynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013816","descriptor_name":"Thermodynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020029","descriptor_name":"Base Pairing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020029","descriptor_name":"Base Pairing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020029","descriptor_name":"Base Pairing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020029","descriptor_name":"Base Pairing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/btt025","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt025","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/5/654/16919585/btt025.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:23335014","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23335014","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.892.3605","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.892.3605","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.oxfordjournals.org/content/early/2013/01/17/bioinformatics.btt025.full.pdf","raw_type":"text"},{"id":"pmh:oai:ora.ox.ac.uk:uuid:b70805ef-baa6-4b36-8d24-252f751e4352","is_oa":false,"landing_page_url":"https://ora.ox.ac.uk/objects/uuid:b70805ef-baa6-4b36-8d24-252f751e4352","pdf_url":null,"source":{"id":"https://openalex.org/S4306402636","display_name":"Oxford University Research Archive (ORA) (University of Oxford)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I40120149","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/I40120149"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PubMed (http://www.ncbi.nlm.nih.gov/pubmed/)","raw_type":"Journal article"},{"id":"pmh:oai:pure.atira.dk:publications/0932580b-0195-4fdd-a684-af275bf6c6d2","is_oa":false,"landing_page_url":"https://pure.au.dk/portal/en/publications/0932580b-0195-4fdd-a684-af275bf6c6d2","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Arunapuram, P, Edvardsson, I, Golden, M, Anderson, J W J, Nov\u00e1k, A, S\u00fck\u00f6sd, Z & Hein, J 2013, 'StatAlign 2.0 : Combining statistical alignment with RNA secondary structure prediction', Bioinformatics, vol. 29, no. 5, pp. 654-655. https://doi.org/10.1093/bioinformatics/btt025","raw_type":"info:eu-repo/semantics/publishedVersion"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btt025","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btt025","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/5/654/16919585/btt025.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320334627","display_name":"Engineering and Physical Sciences Research Council","ror":"https://ror.org/0439y7842"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2171338061.pdf","grobid_xml":"https://content.openalex.org/works/W2171338061.grobid-xml"},"referenced_works_count":13,"referenced_works":["https://openalex.org/W1968256798","https://openalex.org/W2021839440","https://openalex.org/W2042881722","https://openalex.org/W2045895660","https://openalex.org/W2102502076","https://openalex.org/W2111272410","https://openalex.org/W2127322768","https://openalex.org/W2132926880","https://openalex.org/W2137640371","https://openalex.org/W2140812101","https://openalex.org/W2143407915","https://openalex.org/W2159235552","https://openalex.org/W2163947901"],"related_works":["https://openalex.org/W2147993839","https://openalex.org/W1840103016","https://openalex.org/W54859794","https://openalex.org/W2064941026","https://openalex.org/W2359508303","https://openalex.org/W1983151649","https://openalex.org/W2057323302","https://openalex.org/W1966225171","https://openalex.org/W2028642547","https://openalex.org/W4401590094"],"abstract_inverted_index":{"The":[0],"software":[1],"is":[2],"available":[3],"from":[4],"http://statalign.github.com/statalign/.":[5]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":6},{"year":2013,"cited_by_count":1}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}