{"id":"https://openalex.org/W2139779008","doi":"https://doi.org/10.1093/bioinformatics/bts691","title":"PLI: a web-based tool for the comparison of protein-ligand interactions observed on PDB structures","display_name":"PLI: a web-based tool for the comparison of protein-ligand interactions observed on PDB structures","publication_year":2012,"publication_date":"2012-11-29","ids":{"openalex":"https://openalex.org/W2139779008","doi":"https://doi.org/10.1093/bioinformatics/bts691","mag":"2139779008","pmid":"https://pubmed.ncbi.nlm.nih.gov/23196990"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bts691","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts691","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/3/395/48891595/bioinformatics_29_3_395.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/29/3/395/48891595/bioinformatics_29_3_395.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103755459","display_name":"Anna Maria Gallina","orcid":null},"institutions":[{"id":"https://openalex.org/I30771326","display_name":"Italian Institute of Technology","ror":"https://ror.org/042t93s57","country_code":"IT","type":"facility","lineage":["https://openalex.org/I30771326"]},{"id":"https://openalex.org/I4210146472","display_name":"Ospedale Policlinico San Martino","ror":"https://ror.org/04d7es448","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210146472","https://openalex.org/I4210153126","https://openalex.org/I4405264730"]},{"id":"https://openalex.org/I4210153126","display_name":"Istituti di Ricovero e Cura a Carattere Scientifico","ror":"https://ror.org/04tfzc498","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210153126"]},{"id":"https://openalex.org/I4210162684","display_name":"Scuola Superiore Internazionale di Studi Universitari di Ricerca e Formazione","ror":"https://ror.org/03gnn5r15","country_code":"IT","type":"education","lineage":["https://openalex.org/I4210162684"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Anna Maria Gallina","raw_affiliation_strings":["1 IRCCS Azienda Ospedaliera Universitaria San Martino\u2014IST\u2014Istituto Nazionale Ricerca sul Cancro, 16132 Genova, Italy, 2Istituto Italiano di Tecnologia, 16163 Genova, Italy and 3Dipartimento di Fisica, Universita\u2019 di Genova, 16146 Genova, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 IRCCS Azienda Ospedaliera Universitaria San Martino\u2014IST\u2014Istituto Nazionale Ricerca sul Cancro, 16132 Genova, Italy, 2Istituto Italiano di Tecnologia, 16163 Genova, Italy and 3Dipartimento di Fisica, Universita\u2019 di Genova, 16146 Genova, Italy","institution_ids":["https://openalex.org/I30771326","https://openalex.org/I4210146472","https://openalex.org/I4210153126","https://openalex.org/I4210162684"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054421536","display_name":"Paola Bisignano","orcid":"https://orcid.org/0000-0003-1789-762X"},"institutions":[{"id":"https://openalex.org/I30771326","display_name":"Italian Institute of Technology","ror":"https://ror.org/042t93s57","country_code":"IT","type":"facility","lineage":["https://openalex.org/I30771326"]},{"id":"https://openalex.org/I4210146472","display_name":"Ospedale Policlinico San Martino","ror":"https://ror.org/04d7es448","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210146472","https://openalex.org/I4210153126","https://openalex.org/I4405264730"]},{"id":"https://openalex.org/I4210153126","display_name":"Istituti di Ricovero e Cura a Carattere Scientifico","ror":"https://ror.org/04tfzc498","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210153126"]},{"id":"https://openalex.org/I4210162684","display_name":"Scuola Superiore Internazionale di Studi Universitari di Ricerca e Formazione","ror":"https://ror.org/03gnn5r15","country_code":"IT","type":"education","lineage":["https://openalex.org/I4210162684"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Paola Bisignano","raw_affiliation_strings":["1 IRCCS Azienda Ospedaliera Universitaria San Martino\u2014IST\u2014Istituto Nazionale Ricerca sul Cancro, 16132 Genova, Italy, 2Istituto Italiano di Tecnologia, 16163 Genova, Italy and 3Dipartimento di Fisica, Universita\u2019 di Genova, 16146 Genova, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 IRCCS Azienda Ospedaliera Universitaria San Martino\u2014IST\u2014Istituto Nazionale Ricerca sul Cancro, 16132 Genova, Italy, 2Istituto Italiano di Tecnologia, 16163 Genova, Italy and 3Dipartimento di Fisica, Universita\u2019 di Genova, 16146 Genova, Italy","institution_ids":["https://openalex.org/I30771326","https://openalex.org/I4210146472","https://openalex.org/I4210153126","https://openalex.org/I4210162684"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066535295","display_name":"Maurizio Bergamino","orcid":"https://orcid.org/0000-0001-6618-3784"},"institutions":[{"id":"https://openalex.org/I30771326","display_name":"Italian Institute of Technology","ror":"https://ror.org/042t93s57","country_code":"IT","type":"facility","lineage":["https://openalex.org/I30771326"]},{"id":"https://openalex.org/I4210146472","display_name":"Ospedale Policlinico San Martino","ror":"https://ror.org/04d7es448","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210146472","https://openalex.org/I4210153126","https://openalex.org/I4405264730"]},{"id":"https://openalex.org/I4210153126","display_name":"Istituti di Ricovero e Cura a Carattere Scientifico","ror":"https://ror.org/04tfzc498","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210153126"]},{"id":"https://openalex.org/I4210162684","display_name":"Scuola Superiore Internazionale di Studi Universitari di Ricerca e Formazione","ror":"https://ror.org/03gnn5r15","country_code":"IT","type":"education","lineage":["https://openalex.org/I4210162684"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Maurizio Bergamino","raw_affiliation_strings":["1 IRCCS Azienda Ospedaliera Universitaria San Martino\u2014IST\u2014Istituto Nazionale Ricerca sul Cancro, 16132 Genova, Italy, 2Istituto Italiano di Tecnologia, 16163 Genova, Italy and 3Dipartimento di Fisica, Universita\u2019 di Genova, 16146 Genova, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 IRCCS Azienda Ospedaliera Universitaria San Martino\u2014IST\u2014Istituto Nazionale Ricerca sul Cancro, 16132 Genova, Italy, 2Istituto Italiano di Tecnologia, 16163 Genova, Italy and 3Dipartimento di Fisica, Universita\u2019 di Genova, 16146 Genova, Italy","institution_ids":["https://openalex.org/I30771326","https://openalex.org/I4210146472","https://openalex.org/I4210153126","https://openalex.org/I4210162684"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5000417928","display_name":"Domenico Bordo","orcid":null},"institutions":[{"id":"https://openalex.org/I30771326","display_name":"Italian Institute of Technology","ror":"https://ror.org/042t93s57","country_code":"IT","type":"facility","lineage":["https://openalex.org/I30771326"]},{"id":"https://openalex.org/I4210146472","display_name":"Ospedale Policlinico San Martino","ror":"https://ror.org/04d7es448","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210146472","https://openalex.org/I4210153126","https://openalex.org/I4405264730"]},{"id":"https://openalex.org/I4210153126","display_name":"Istituti di Ricovero e Cura a Carattere Scientifico","ror":"https://ror.org/04tfzc498","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210153126"]},{"id":"https://openalex.org/I4210162684","display_name":"Scuola Superiore Internazionale di Studi Universitari di Ricerca e Formazione","ror":"https://ror.org/03gnn5r15","country_code":"IT","type":"education","lineage":["https://openalex.org/I4210162684"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Domenico Bordo","raw_affiliation_strings":["1 IRCCS Azienda Ospedaliera Universitaria San Martino\u2014IST\u2014Istituto Nazionale Ricerca sul Cancro, 16132 Genova, Italy, 2Istituto Italiano di Tecnologia, 16163 Genova, Italy and 3Dipartimento di Fisica, Universita\u2019 di Genova, 16146 Genova, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 IRCCS Azienda Ospedaliera Universitaria San Martino\u2014IST\u2014Istituto Nazionale Ricerca sul Cancro, 16132 Genova, Italy, 2Istituto Italiano di Tecnologia, 16163 Genova, Italy and 3Dipartimento di Fisica, Universita\u2019 di Genova, 16146 Genova, Italy","institution_ids":["https://openalex.org/I30771326","https://openalex.org/I4210146472","https://openalex.org/I4210153126","https://openalex.org/I4210162684"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5000417928"],"corresponding_institution_ids":["https://openalex.org/I30771326","https://openalex.org/I4210146472","https://openalex.org/I4210153126","https://openalex.org/I4210162684"],"apc_list":{"value":3989,"currency":"USD","value_usd":3989},"apc_paid":null,"fwci":2.2705,"has_fulltext":true,"cited_by_count":17,"citation_normalized_percentile":{"value":0.8898901,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"29","issue":"3","first_page":"395","last_page":"397"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.4970000088214874,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.4970000088214874,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.07980000227689743,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12867","display_name":"Advanced Biosensing Techniques and Applications","score":0.02850000001490116,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/protein-data-bank","display_name":"Protein Data Bank (RCSB PDB)","score":0.8354297876358032},{"id":"https://openalex.org/keywords/protein-data-bank","display_name":"Protein Data Bank","score":0.8265708684921265},{"id":"https://openalex.org/keywords/ligand","display_name":"Ligand (biochemistry)","score":0.7096709609031677},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5636746883392334},{"id":"https://openalex.org/keywords/protein-ligand","display_name":"Protein ligand","score":0.528613269329071},{"id":"https://openalex.org/keywords/protein-superfamily","display_name":"Protein superfamily","score":0.4990196228027344},{"id":"https://openalex.org/keywords/small-molecule","display_name":"Small molecule","score":0.4614841341972351},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.43046438694000244},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.4240870475769043},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.4036139249801636},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.35978013277053833},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.33642899990081787},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.32076606154441833},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.3201887011528015},{"id":"https://openalex.org/keywords/receptor","display_name":"Receptor","score":0.15061557292938232}],"concepts":[{"id":"https://openalex.org/C65556437","wikidata":"https://www.wikidata.org/wiki/Q766195","display_name":"Protein Data Bank (RCSB PDB)","level":2,"score":0.8354297876358032},{"id":"https://openalex.org/C119145174","wikidata":"https://www.wikidata.org/wiki/Q7251429","display_name":"Protein Data Bank","level":3,"score":0.8265708684921265},{"id":"https://openalex.org/C116569031","wikidata":"https://www.wikidata.org/wiki/Q899107","display_name":"Ligand (biochemistry)","level":3,"score":0.7096709609031677},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5636746883392334},{"id":"https://openalex.org/C109095088","wikidata":"https://www.wikidata.org/wiki/Q899107","display_name":"Protein ligand","level":2,"score":0.528613269329071},{"id":"https://openalex.org/C178180057","wikidata":"https://www.wikidata.org/wiki/Q7251477","display_name":"Protein superfamily","level":3,"score":0.4990196228027344},{"id":"https://openalex.org/C161624437","wikidata":"https://www.wikidata.org/wiki/Q1988322","display_name":"Small molecule","level":2,"score":0.4614841341972351},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.43046438694000244},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.4240870475769043},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.4036139249801636},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.35978013277053833},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.33642899990081787},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.32076606154441833},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.3201887011528015},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.15061557292938232},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/bts691","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts691","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/3/395/48891595/bioinformatics_29_3_395.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:23196990","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23196990","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":"Journal Article"},{"id":"pmh:oai:zenodo.org:100761","is_oa":true,"landing_page_url":"https://www.openaccessrepository.it/record/100761","pdf_url":null,"source":{"id":"https://openalex.org/S4306402478","display_name":"INFM-OAR (INFN Catania)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210116497","host_organization_name":"Istituto Nazionale di Fisica Nucleare, Sezione di Catania","host_organization_lineage":["https://openalex.org/I4210116497"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bts691","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts691","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/3/395/48891595/bioinformatics_29_3_395.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321781","display_name":"Ministero della Salute","ror":"https://ror.org/00789fa95"},{"id":"https://openalex.org/F4320326077","display_name":"Regione Liguria","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2139779008.pdf","grobid_xml":"https://content.openalex.org/works/W2139779008.grobid-xml"},"referenced_works_count":6,"referenced_works":["https://openalex.org/W1991019032","https://openalex.org/W1998767819","https://openalex.org/W2062663912","https://openalex.org/W2081912151","https://openalex.org/W2137052779","https://openalex.org/W2166674455"],"related_works":["https://openalex.org/W2040535930","https://openalex.org/W4387033830","https://openalex.org/W3013529667","https://openalex.org/W1559108998","https://openalex.org/W2951367335","https://openalex.org/W2139779008","https://openalex.org/W2803843415","https://openalex.org/W1993046136","https://openalex.org/W2006718226","https://openalex.org/W2053132779"],"abstract_inverted_index":{"MOTIVATION:":[0],"A":[1],"large":[2],"fraction":[3],"of":[4,75,105],"the":[5,9,32,61,102,123,130],"entries":[6],"contained":[7],"in":[8,15,37,46,49,83,108,122,129],"Protein":[10,124],"Data":[11,125],"Bank":[12,126],"describe":[13],"proteins":[14,107],"complex":[16,109],"with":[17,71,110],"low":[18],"molecular":[19],"weight":[20],"molecules":[21],"such":[22],"as":[23,64],"physiological":[24,78],"compounds":[25],"or":[26,77],"synthetic":[27],"drugs.":[28],"In":[29],"many":[30],"cases,":[31],"same":[33],"molecule":[34],"is":[35,42,116],"found":[36],"distinct":[38],"protein-ligand":[39,91,119],"complexes.":[40],"There":[41],"an":[43],"increasing":[44],"interest":[45],"Medicinal":[47],"Chemistry":[48],"comparing":[50],"protein":[51],"binding":[52,62,103],"sites":[53],"to":[54,98],"get":[55],"insight":[56],"on":[57],"interactions":[58],"that":[59],"modulate":[60],"specificity,":[63],"this":[65],"structural":[66],"information":[67,115],"can":[68],"be":[69],"correlated":[70],"other":[72],"experimental":[73],"data":[74],"biochemical":[76],"nature":[79],"and":[80,100,127],"may":[81],"help":[82],"rational":[84],"drug":[85],"design.":[86],"RESULTS:":[87],"The":[88,114],"web":[89],"service":[90],"interaction":[92],"presented":[93],"here":[94],"provides":[95],"a":[96,111],"tool":[97],"analyse":[99],"compare":[101],"pockets":[104],"homologous":[106],"selected":[112],"ligand.":[113],"deduced":[117],"from":[118],"complexes":[120],"present":[121],"stored":[128],"underlying":[131],"database.":[132],"AVAILABILITY:":[133],"Freely":[134],"accessible":[135],"at":[136],"http://bioinformatics.istge.it/pli/.":[137]},"counts_by_year":[{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":4},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":4}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
