{"id":"https://openalex.org/W2170405129","doi":"https://doi.org/10.1093/bioinformatics/bts659","title":"Bridging the scales: semantic integration of quantitative SBML in graphical multi-cellular models and simulations with EPISIM and COPASI","display_name":"Bridging the scales: semantic integration of quantitative SBML in graphical multi-cellular models and simulations with EPISIM and COPASI","publication_year":2012,"publication_date":"2012-11-18","ids":{"openalex":"https://openalex.org/W2170405129","doi":"https://doi.org/10.1093/bioinformatics/bts659","mag":"2170405129","pmid":"https://pubmed.ncbi.nlm.nih.gov/23162085"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bts659","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts659","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/2/223/48889716/bioinformatics_29_2_223.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/29/2/223/48889716/bioinformatics_29_2_223.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017276043","display_name":"Thomas S\u00fctterlin","orcid":"https://orcid.org/0000-0003-0126-4692"},"institutions":[{"id":"https://openalex.org/I2802164966","display_name":"University Hospital Heidelberg","ror":"https://ror.org/013czdx64","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2802164966"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I4210111460","display_name":"National Center for Tumor Diseases","ror":"https://ror.org/01txwsw02","country_code":"DE","type":"funder","lineage":["https://openalex.org/I4210111460"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Thomas S\u00fctterlin","raw_affiliation_strings":["1 Department of Medical Oncology, National Center for Tumor Diseases (NCT), University Hospital Heidelberg, 2Hamamatsu Tissue Imaging and Analysis Center (TIGA), BIOQUANT, Heidelberg University and 3Department of Medical Informatics, Institute of Medical Biometry and Informatics, University Hospital Heidelberg, 69120 Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"1 Department of Medical Oncology, National Center for Tumor Diseases (NCT), University Hospital Heidelberg, 2Hamamatsu Tissue Imaging and Analysis Center (TIGA), BIOQUANT, Heidelberg University and 3Department of Medical Informatics, Institute of Medical Biometry and Informatics, University Hospital Heidelberg, 69120 Heidelberg, Germany","institution_ids":["https://openalex.org/I4210111460","https://openalex.org/I223822909","https://openalex.org/I2802164966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045094937","display_name":"Christoph Kolb","orcid":null},"institutions":[{"id":"https://openalex.org/I4210111460","display_name":"National Center for Tumor Diseases","ror":"https://ror.org/01txwsw02","country_code":"DE","type":"funder","lineage":["https://openalex.org/I4210111460"]},{"id":"https://openalex.org/I2802164966","display_name":"University Hospital Heidelberg","ror":"https://ror.org/013czdx64","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2802164966"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Christoph Kolb","raw_affiliation_strings":["1 Department of Medical Oncology, National Center for Tumor Diseases (NCT), University Hospital Heidelberg, 2Hamamatsu Tissue Imaging and Analysis Center (TIGA), BIOQUANT, Heidelberg University and 3Department of Medical Informatics, Institute of Medical Biometry and Informatics, University Hospital Heidelberg, 69120 Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"1 Department of Medical Oncology, National Center for Tumor Diseases (NCT), University Hospital Heidelberg, 2Hamamatsu Tissue Imaging and Analysis Center (TIGA), BIOQUANT, Heidelberg University and 3Department of Medical Informatics, Institute of Medical Biometry and Informatics, University Hospital Heidelberg, 69120 Heidelberg, Germany","institution_ids":["https://openalex.org/I4210111460","https://openalex.org/I223822909","https://openalex.org/I2802164966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091133949","display_name":"Hartmut Dickhaus","orcid":null},"institutions":[{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I4210111460","display_name":"National Center for Tumor Diseases","ror":"https://ror.org/01txwsw02","country_code":"DE","type":"funder","lineage":["https://openalex.org/I4210111460"]},{"id":"https://openalex.org/I2802164966","display_name":"University Hospital Heidelberg","ror":"https://ror.org/013czdx64","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2802164966"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Hartmut Dickhaus","raw_affiliation_strings":["1 Department of Medical Oncology, National Center for Tumor Diseases (NCT), University Hospital Heidelberg, 2Hamamatsu Tissue Imaging and Analysis Center (TIGA), BIOQUANT, Heidelberg University and 3Department of Medical Informatics, Institute of Medical Biometry and Informatics, University Hospital Heidelberg, 69120 Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"1 Department of Medical Oncology, National Center for Tumor Diseases (NCT), University Hospital Heidelberg, 2Hamamatsu Tissue Imaging and Analysis Center (TIGA), BIOQUANT, Heidelberg University and 3Department of Medical Informatics, Institute of Medical Biometry and Informatics, University Hospital Heidelberg, 69120 Heidelberg, Germany","institution_ids":["https://openalex.org/I4210111460","https://openalex.org/I223822909","https://openalex.org/I2802164966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034918056","display_name":"Dirk J\u00e4ger","orcid":null},"institutions":[{"id":"https://openalex.org/I2802164966","display_name":"University Hospital Heidelberg","ror":"https://ror.org/013czdx64","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2802164966"]},{"id":"https://openalex.org/I4210111460","display_name":"National Center for Tumor Diseases","ror":"https://ror.org/01txwsw02","country_code":"DE","type":"funder","lineage":["https://openalex.org/I4210111460"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Dirk J\u00e4ger","raw_affiliation_strings":["1 Department of Medical Oncology, National Center for Tumor Diseases (NCT), University Hospital Heidelberg, 2Hamamatsu Tissue Imaging and Analysis Center (TIGA), BIOQUANT, Heidelberg University and 3Department of Medical Informatics, Institute of Medical Biometry and Informatics, University Hospital Heidelberg, 69120 Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"1 Department of Medical Oncology, National Center for Tumor Diseases (NCT), University Hospital Heidelberg, 2Hamamatsu Tissue Imaging and Analysis Center (TIGA), BIOQUANT, Heidelberg University and 3Department of Medical Informatics, Institute of Medical Biometry and Informatics, University Hospital Heidelberg, 69120 Heidelberg, Germany","institution_ids":["https://openalex.org/I4210111460","https://openalex.org/I223822909","https://openalex.org/I2802164966"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5039930487","display_name":"Niels Grabe","orcid":"https://orcid.org/0000-0003-1732-3706"},"institutions":[{"id":"https://openalex.org/I4210111460","display_name":"National Center for Tumor Diseases","ror":"https://ror.org/01txwsw02","country_code":"DE","type":"funder","lineage":["https://openalex.org/I4210111460"]},{"id":"https://openalex.org/I2802164966","display_name":"University Hospital Heidelberg","ror":"https://ror.org/013czdx64","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2802164966"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Niels Grabe","raw_affiliation_strings":["1 Department of Medical Oncology, National Center for Tumor Diseases (NCT), University Hospital Heidelberg, 2Hamamatsu Tissue Imaging and Analysis Center (TIGA), BIOQUANT, Heidelberg University and 3Department of Medical Informatics, Institute of Medical Biometry and Informatics, University Hospital Heidelberg, 69120 Heidelberg, Germany"],"affiliations":[{"raw_affiliation_string":"1 Department of Medical Oncology, National Center for Tumor Diseases (NCT), University Hospital Heidelberg, 2Hamamatsu Tissue Imaging and Analysis Center (TIGA), BIOQUANT, Heidelberg University and 3Department of Medical Informatics, Institute of Medical Biometry and Informatics, University Hospital Heidelberg, 69120 Heidelberg, Germany","institution_ids":["https://openalex.org/I4210111460","https://openalex.org/I223822909","https://openalex.org/I2802164966"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5039930487"],"corresponding_institution_ids":["https://openalex.org/I223822909","https://openalex.org/I2802164966","https://openalex.org/I4210111460"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":2.6893,"has_fulltext":true,"cited_by_count":71,"citation_normalized_percentile":{"value":0.90761293,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"29","issue":"2","first_page":"223","last_page":"229"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11829","display_name":"Mathematical Biology Tumor Growth","score":0.9919999837875366,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.983299970626831,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sbml","display_name":"SBML","score":0.9867742657661438},{"id":"https://openalex.org/keywords/executable","display_name":"Executable","score":0.9431228637695312},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.772891640663147},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.7536090612411499},{"id":"https://openalex.org/keywords/markup-language","display_name":"Markup language","score":0.7340635061264038},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5545790791511536},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.4742695093154907},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.47019562125205994},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3656314015388489},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.334184467792511},{"id":"https://openalex.org/keywords/xml","display_name":"XML","score":0.29647940397262573},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.24254709482192993},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.23805701732635498},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15346339344978333},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.12186840176582336}],"concepts":[{"id":"https://openalex.org/C87186988","wikidata":"https://www.wikidata.org/wiki/Q452197","display_name":"SBML","level":4,"score":0.9867742657661438},{"id":"https://openalex.org/C160145156","wikidata":"https://www.wikidata.org/wiki/Q778586","display_name":"Executable","level":2,"score":0.9431228637695312},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.772891640663147},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.7536090612411499},{"id":"https://openalex.org/C45874996","wikidata":"https://www.wikidata.org/wiki/Q37045","display_name":"Markup language","level":3,"score":0.7340635061264038},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5545790791511536},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.4742695093154907},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.47019562125205994},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3656314015388489},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.334184467792511},{"id":"https://openalex.org/C8797682","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"XML","level":2,"score":0.29647940397262573},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.24254709482192993},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.23805701732635498},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15346339344978333},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.12186840176582336}],"mesh":[{"descriptor_ui":"D000078404","descriptor_name":"Epidermal Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000078404","descriptor_name":"Epidermal Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000078404","descriptor_name":"Epidermal Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002453","descriptor_name":"Cell Cycle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002453","descriptor_name":"Cell Cycle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002453","descriptor_name":"Cell Cycle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002454","descriptor_name":"Cell Differentiation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002454","descriptor_name":"Cell Differentiation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002454","descriptor_name":"Cell Differentiation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/bts659","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts659","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/2/223/48889716/bioinformatics_29_2_223.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:23162085","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23162085","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bts659","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts659","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/29/2/223/48889716/bioinformatics_29_2_223.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1040479455","display_name":null,"funder_award_id":"Virtual Liver Network","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"}],"funders":[{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2170405129.pdf","grobid_xml":"https://content.openalex.org/works/W2170405129.grobid-xml"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W1809480526","https://openalex.org/W1842201744","https://openalex.org/W1996195324","https://openalex.org/W1996198135","https://openalex.org/W2003909961","https://openalex.org/W2034834958","https://openalex.org/W2040163651","https://openalex.org/W2043875880","https://openalex.org/W2044765334","https://openalex.org/W2102653059","https://openalex.org/W2107062718","https://openalex.org/W2117364474","https://openalex.org/W2120629640","https://openalex.org/W2134648876","https://openalex.org/W2144244247","https://openalex.org/W2149193200","https://openalex.org/W2150908245","https://openalex.org/W2153355648","https://openalex.org/W2156571897","https://openalex.org/W2162144833","https://openalex.org/W2167931729","https://openalex.org/W2216895152","https://openalex.org/W3143164352"],"related_works":["https://openalex.org/W2082621456","https://openalex.org/W2981332207","https://openalex.org/W2170405129","https://openalex.org/W2100525485","https://openalex.org/W2040642413","https://openalex.org/W3048335229","https://openalex.org/W2146744007","https://openalex.org/W2150908245","https://openalex.org/W2211443823","https://openalex.org/W2043776573"],"abstract_inverted_index":{"niels.grabe@bioquant.uni-heidelberg.de.":[0]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":7},{"year":2018,"cited_by_count":8},{"year":2017,"cited_by_count":7},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":9},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":5}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}