{"id":"https://openalex.org/W2144504271","doi":"https://doi.org/10.1093/bioinformatics/bts606","title":"A high-performance computing toolset for relatedness and principal component analysis of SNP data","display_name":"A high-performance computing toolset for relatedness and principal component analysis of SNP data","publication_year":2012,"publication_date":"2012-10-11","ids":{"openalex":"https://openalex.org/W2144504271","doi":"https://doi.org/10.1093/bioinformatics/bts606","mag":"2144504271","pmid":"https://pubmed.ncbi.nlm.nih.gov/23060615"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bts606","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts606","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/24/3326/679355/bts606.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/28/24/3326/679355/bts606.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5005837780","display_name":"Xiuwen Zheng","orcid":"https://orcid.org/0000-0002-1390-0708"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Xiuwen Zheng","raw_affiliation_strings":["Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA","Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA#TAB#","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085922041","display_name":"David Levine","orcid":"https://orcid.org/0000-0002-9292-570X"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David Levine","raw_affiliation_strings":["Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA","Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA#TAB#","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109890519","display_name":"Jess Shen","orcid":null},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jess Shen","raw_affiliation_strings":["Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA","Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA#TAB#","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081885552","display_name":"Stephanie M. Gogarten","orcid":"https://orcid.org/0000-0002-7231-9745"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Stephanie M. Gogarten","raw_affiliation_strings":["Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA","Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA#TAB#","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047463043","display_name":"Cathy C. Laurie","orcid":"https://orcid.org/0000-0003-2572-4040"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cathy Laurie","raw_affiliation_strings":["Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA","Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA#TAB#","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5013703682","display_name":"Bruce S. Weir","orcid":"https://orcid.org/0000-0002-4883-1247"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bruce S. Weir","raw_affiliation_strings":["Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA","Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Department of Biostatistics, University of Washington, Seattle, WA 98195-7232, USA#TAB#","institution_ids":["https://openalex.org/I201448701"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5005837780"],"corresponding_institution_ids":["https://openalex.org/I201448701"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":13.669,"has_fulltext":false,"cited_by_count":2800,"citation_normalized_percentile":{"value":0.99240429,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"28","issue":"24","first_page":"3326","last_page":"3328"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/principal-component-analysis","display_name":"Principal component analysis","score":0.8278670310974121},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7487348318099976},{"id":"https://openalex.org/keywords/uniprocessor-system","display_name":"Uniprocessor system","score":0.7279201149940491},{"id":"https://openalex.org/keywords/implementation","display_name":"Implementation","score":0.5052726864814758},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.447689026594162},{"id":"https://openalex.org/keywords/component","display_name":"Component (thermodynamics)","score":0.43211066722869873},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.41013461351394653},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.3935753107070923},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.31040340662002563},{"id":"https://openalex.org/keywords/multiprocessing","display_name":"Multiprocessing","score":0.30175095796585083},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.18745556473731995},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.08674690127372742}],"concepts":[{"id":"https://openalex.org/C27438332","wikidata":"https://www.wikidata.org/wiki/Q2873","display_name":"Principal component analysis","level":2,"score":0.8278670310974121},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7487348318099976},{"id":"https://openalex.org/C79189994","wikidata":"https://www.wikidata.org/wiki/Q3488021","display_name":"Uniprocessor system","level":3,"score":0.7279201149940491},{"id":"https://openalex.org/C26713055","wikidata":"https://www.wikidata.org/wiki/Q245962","display_name":"Implementation","level":2,"score":0.5052726864814758},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.447689026594162},{"id":"https://openalex.org/C168167062","wikidata":"https://www.wikidata.org/wiki/Q1117970","display_name":"Component (thermodynamics)","level":2,"score":0.43211066722869873},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.41013461351394653},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.3935753107070923},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.31040340662002563},{"id":"https://openalex.org/C4822641","wikidata":"https://www.wikidata.org/wiki/Q846651","display_name":"Multiprocessing","level":2,"score":0.30175095796585083},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.18745556473731995},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.08674690127372742},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025341","descriptor_name":"Principal Component Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025341","descriptor_name":"Principal Component Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025341","descriptor_name":"Principal Component Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/bts606","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts606","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/24/3326/679355/bts606.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:23060615","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23060615","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:repositorio.unal.edu.co:unal/81344","is_oa":true,"landing_page_url":"https://repositorio.unal.edu.co/handle/unal/81344","pdf_url":null,"source":{"id":"https://openalex.org/S4306402641","display_name":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Cient\u00edficas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4383465926","host_organization_name":"LA Referencia","host_organization_lineage":["https://openalex.org/I4383465926"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"reponame:Repositorio UN","raw_type":"info:eu-repo/semantics/masterThesis"},{"id":"pmh:oai:europepmc.org:2827206","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3519454","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bts606","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts606","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/24/3326/679355/bts606.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3476290675","display_name":null,"funder_award_id":"U01 HG 004446","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G6106082789","display_name":null,"funder_award_id":"P01 GM099568","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G7705227774","display_name":null,"funder_award_id":"U01 HG004446","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"}],"funders":[{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W1999015493","https://openalex.org/W2009588715","https://openalex.org/W2050886653","https://openalex.org/W2050897245","https://openalex.org/W2096095753","https://openalex.org/W2100442196","https://openalex.org/W2118967025","https://openalex.org/W2120483845","https://openalex.org/W2149992227","https://openalex.org/W2150092391","https://openalex.org/W2157752701","https://openalex.org/W2161633633","https://openalex.org/W2171777347","https://openalex.org/W2885727518"],"related_works":["https://openalex.org/W2021050177","https://openalex.org/W232296991","https://openalex.org/W2039391036","https://openalex.org/W2149154914","https://openalex.org/W2186708011","https://openalex.org/W2134237474","https://openalex.org/W2899110000","https://openalex.org/W3044927936","https://openalex.org/W2623493286","https://openalex.org/W2285316324"],"abstract_inverted_index":{"Abstract":[0],"Summary:":[1],"Genome-wide":[2],"association":[3],"studies":[4],"are":[5,59,75,142],"widely":[6],"used":[7,121],"to":[8,36,98,122],"investigate":[9],"the":[10,68,80,84,130],"genetic":[11],"basis":[12],"of":[13,56,71,108,110,114],"diseases":[14],"and":[15,26,48,63,73,88,93,137,140],"traits,":[16],"but":[17],"they":[18],"pose":[19],"many":[20],"computational":[21],"challenges.":[22],"We":[23],"developed":[24],"gdsfmt":[25,139],"SNPRelate":[27,104,141],"(R":[28],"packages":[29],"for":[30],"multi-core":[31],"symmetric":[32],"multiprocessing":[33],"computer":[34],"architectures)":[35],"accelerate":[37],"two":[38],"key":[39],"computations":[40],"on":[41,125],"SNP":[42],"data:":[43],"principal":[44],"component":[45],"analysis":[46,50],"(PCA)":[47],"relatedness":[49],"using":[51,101],"identity-by-descent":[52,74],"measures.":[53],"The":[54],"kernels":[55],"our":[57,118],"algorithms":[58],"written":[60],"in":[61,83],"C/C++":[62],"highly":[64],"optimized.":[65],"Benchmarks":[66],"show":[67],"uniprocessor":[69],"implementations":[70,81],"PCA":[72,124],"\u223c8\u201350":[76],"times":[77],"faster":[78],"than":[79],"provided":[82],"popular":[85],"EIGENSTRAT":[86],"(v3.0)":[87],"PLINK":[89],"(v1.07)":[90],"programs,":[91],"respectively,":[92],"can":[94,105,153],"be":[95,154],"sped":[96],"up":[97],"30\u2013300-fold":[99],"by":[100],"eight":[102],"cores.":[103],"analyse":[106],"tens":[107],"thousands":[109],"samples":[111],"with":[112],"millions":[113],"SNPs.":[115],"For":[116],"example,":[117],"package":[119],"was":[120],"perform":[123],"55":[126],"324":[127],"subjects":[128],"from":[129,144],"\u2018Gene-Environment":[131],"Association":[132],"Studies\u2019":[133],"consortium":[134],"studies.":[135],"Availability":[136],"implementation:":[138],"available":[143],"R":[145],"CRAN":[146],"(http://cran.r-project.org),":[147],"including":[148],"a":[149],"vignette.":[150],"A":[151],"tutorial":[152],"found":[155],"at":[156],"https://www.genevastudy.org/Accomplishments/software.":[157],"Contact:":[158],"zhengx@u.washington.edu":[159]},"counts_by_year":[{"year":2026,"cited_by_count":157},{"year":2025,"cited_by_count":287},{"year":2024,"cited_by_count":359},{"year":2023,"cited_by_count":326},{"year":2022,"cited_by_count":340},{"year":2021,"cited_by_count":384},{"year":2020,"cited_by_count":284},{"year":2019,"cited_by_count":221},{"year":2018,"cited_by_count":175},{"year":2017,"cited_by_count":115},{"year":2016,"cited_by_count":73},{"year":2015,"cited_by_count":40},{"year":2014,"cited_by_count":26},{"year":2013,"cited_by_count":6},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-25T09:21:30.201066","created_date":"2025-10-10T00:00:00"}
