{"id":"https://openalex.org/W2110181121","doi":"https://doi.org/10.1093/bioinformatics/bts436","title":"dbSNO: a database of cysteine <i>S</i>-nitrosylation","display_name":"dbSNO: a database of cysteine <i>S</i>-nitrosylation","publication_year":2012,"publication_date":"2012-07-10","ids":{"openalex":"https://openalex.org/W2110181121","doi":"https://doi.org/10.1093/bioinformatics/bts436","mag":"2110181121","pmid":"https://pubmed.ncbi.nlm.nih.gov/22782549"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bts436","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts436","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/17/2293/48871916/bioinformatics_28_17_2293.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/28/17/2293/48871916/bioinformatics_28_17_2293.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5045675277","display_name":"Tzong-Yi Lee","orcid":"https://orcid.org/0000-0001-8475-7868"},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]},{"id":"https://openalex.org/I4210157360","display_name":"Institute of Chemistry, Academia Sinica","ror":"https://ror.org/04xjjma71","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210157360","https://openalex.org/I84653119"]},{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Tzong-Yi Lee","raw_affiliation_strings":["1 Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, 2Institute of Chemistry, Academia Sinica, Taipei 115, 3Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsin-Chu 300 and 4Department of Biological Science and Technology, National Chiao Tung University, Hsin-Chu 300, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, 2Institute of Chemistry, Academia Sinica, Taipei 115, 3Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsin-Chu 300 and 4Department of Biological Science and Technology, National Chiao Tung University, Hsin-Chu 300, Taiwan","institution_ids":["https://openalex.org/I148366613","https://openalex.org/I4210157360","https://openalex.org/I99908691"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100724060","display_name":"Yi\u2010Ju Chen","orcid":"https://orcid.org/0000-0002-7203-9188"},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]},{"id":"https://openalex.org/I4210157360","display_name":"Institute of Chemistry, Academia Sinica","ror":"https://ror.org/04xjjma71","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210157360","https://openalex.org/I84653119"]},{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yi-Ju Chen","raw_affiliation_strings":["1 Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, 2Institute of Chemistry, Academia Sinica, Taipei 115, 3Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsin-Chu 300 and 4Department of Biological Science and Technology, National Chiao Tung University, Hsin-Chu 300, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, 2Institute of Chemistry, Academia Sinica, Taipei 115, 3Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsin-Chu 300 and 4Department of Biological Science and Technology, National Chiao Tung University, Hsin-Chu 300, Taiwan","institution_ids":["https://openalex.org/I148366613","https://openalex.org/I4210157360","https://openalex.org/I99908691"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Yi-Ju Chen","orcid":null},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]},{"id":"https://openalex.org/I4210157360","display_name":"Institute of Chemistry, Academia Sinica","ror":"https://ror.org/04xjjma71","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210157360","https://openalex.org/I84653119"]},{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Yi-Ju Chen","raw_affiliation_strings":["1 Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, 2Institute of Chemistry, Academia Sinica, Taipei 115, 3Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsin-Chu 300 and 4Department of Biological Science and Technology, National Chiao Tung University, Hsin-Chu 300, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, 2Institute of Chemistry, Academia Sinica, Taipei 115, 3Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsin-Chu 300 and 4Department of Biological Science and Technology, National Chiao Tung University, Hsin-Chu 300, Taiwan","institution_ids":["https://openalex.org/I148366613","https://openalex.org/I4210157360","https://openalex.org/I99908691"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022425747","display_name":"Cheng-Tsung Lu","orcid":null},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]},{"id":"https://openalex.org/I4210157360","display_name":"Institute of Chemistry, Academia Sinica","ror":"https://ror.org/04xjjma71","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210157360","https://openalex.org/I84653119"]},{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Cheng-Tsung Lu","raw_affiliation_strings":["1 Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, 2Institute of Chemistry, Academia Sinica, Taipei 115, 3Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsin-Chu 300 and 4Department of Biological Science and Technology, National Chiao Tung University, Hsin-Chu 300, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, 2Institute of Chemistry, Academia Sinica, Taipei 115, 3Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsin-Chu 300 and 4Department of Biological Science and Technology, National Chiao Tung University, Hsin-Chu 300, Taiwan","institution_ids":["https://openalex.org/I148366613","https://openalex.org/I4210157360","https://openalex.org/I99908691"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037106892","display_name":"Wei-Chieh Ching","orcid":null},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]},{"id":"https://openalex.org/I4210157360","display_name":"Institute of Chemistry, Academia Sinica","ror":"https://ror.org/04xjjma71","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210157360","https://openalex.org/I84653119"]},{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Wei-Chieh Ching","raw_affiliation_strings":["1 Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, 2Institute of Chemistry, Academia Sinica, Taipei 115, 3Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsin-Chu 300 and 4Department of Biological Science and Technology, National Chiao Tung University, Hsin-Chu 300, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, 2Institute of Chemistry, Academia Sinica, Taipei 115, 3Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsin-Chu 300 and 4Department of Biological Science and Technology, National Chiao Tung University, Hsin-Chu 300, Taiwan","institution_ids":["https://openalex.org/I148366613","https://openalex.org/I4210157360","https://openalex.org/I99908691"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020222949","display_name":"Yu-Chuan Teng","orcid":null},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]},{"id":"https://openalex.org/I4210157360","display_name":"Institute of Chemistry, Academia Sinica","ror":"https://ror.org/04xjjma71","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210157360","https://openalex.org/I84653119"]},{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yu-Chuan Teng","raw_affiliation_strings":["1 Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, 2Institute of Chemistry, Academia Sinica, Taipei 115, 3Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsin-Chu 300 and 4Department of Biological Science and Technology, National Chiao Tung University, Hsin-Chu 300, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, 2Institute of Chemistry, Academia Sinica, Taipei 115, 3Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsin-Chu 300 and 4Department of Biological Science and Technology, National Chiao Tung University, Hsin-Chu 300, Taiwan","institution_ids":["https://openalex.org/I148366613","https://openalex.org/I4210157360","https://openalex.org/I99908691"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040277769","display_name":"Hsien\u2010Da Huang","orcid":"https://orcid.org/0000-0003-2857-7023"},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]},{"id":"https://openalex.org/I4210157360","display_name":"Institute of Chemistry, Academia Sinica","ror":"https://ror.org/04xjjma71","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210157360","https://openalex.org/I84653119"]},{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Hsien-Da Huang","raw_affiliation_strings":["1 Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, 2Institute of Chemistry, Academia Sinica, Taipei 115, 3Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsin-Chu 300 and 4Department of Biological Science and Technology, National Chiao Tung University, Hsin-Chu 300, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, 2Institute of Chemistry, Academia Sinica, Taipei 115, 3Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsin-Chu 300 and 4Department of Biological Science and Technology, National Chiao Tung University, Hsin-Chu 300, Taiwan","institution_ids":["https://openalex.org/I148366613","https://openalex.org/I4210157360","https://openalex.org/I99908691"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032536480","display_name":"Yu\u2010Ju Chen","orcid":"https://orcid.org/0000-0002-3178-6697"},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]},{"id":"https://openalex.org/I4210157360","display_name":"Institute of Chemistry, Academia Sinica","ror":"https://ror.org/04xjjma71","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210157360","https://openalex.org/I84653119"]},{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Yu-Ju Chen","raw_affiliation_strings":["1 Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, 2Institute of Chemistry, Academia Sinica, Taipei 115, 3Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsin-Chu 300 and 4Department of Biological Science and Technology, National Chiao Tung University, Hsin-Chu 300, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, 2Institute of Chemistry, Academia Sinica, Taipei 115, 3Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsin-Chu 300 and 4Department of Biological Science and Technology, National Chiao Tung University, Hsin-Chu 300, Taiwan","institution_ids":["https://openalex.org/I148366613","https://openalex.org/I4210157360","https://openalex.org/I99908691"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5032536480","display_name":"Yu\u2010Ju Chen","orcid":"https://orcid.org/0000-0002-3178-6697"},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]},{"id":"https://openalex.org/I4210157360","display_name":"Institute of Chemistry, Academia Sinica","ror":"https://ror.org/04xjjma71","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210157360","https://openalex.org/I84653119"]},{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yu-Ju Chen","raw_affiliation_strings":["1 Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, 2Institute of Chemistry, Academia Sinica, Taipei 115, 3Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsin-Chu 300 and 4Department of Biological Science and Technology, National Chiao Tung University, Hsin-Chu 300, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science and Engineering, Yuan Ze University, Taoyuan 320, 2Institute of Chemistry, Academia Sinica, Taipei 115, 3Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsin-Chu 300 and 4Department of Biological Science and Technology, National Chiao Tung University, Hsin-Chu 300, Taiwan","institution_ids":["https://openalex.org/I148366613","https://openalex.org/I4210157360","https://openalex.org/I99908691"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5032536480","https://openalex.org/A5045675277"],"corresponding_institution_ids":["https://openalex.org/I148366613","https://openalex.org/I4210157360","https://openalex.org/I99908691"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":5.223,"has_fulltext":true,"cited_by_count":77,"citation_normalized_percentile":{"value":0.96366925,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":99},"biblio":{"volume":"28","issue":"17","first_page":"2293","last_page":"2295"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10155","display_name":"Nitric Oxide and Endothelin Effects","score":0.8894000053405762,"subfield":{"id":"https://openalex.org/subfields/2737","display_name":"Physiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10155","display_name":"Nitric Oxide and Endothelin Effects","score":0.8894000053405762,"subfield":{"id":"https://openalex.org/subfields/2737","display_name":"Physiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11884","display_name":"Redox biology and oxidative stress","score":0.043800000101327896,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11481","display_name":"Sulfur Compounds in Biology","score":0.02669999934732914,"subfield":{"id":"https://openalex.org/subfields/1303","display_name":"Biochemistry"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/uniprot","display_name":"UniProt","score":0.8151743412017822},{"id":"https://openalex.org/keywords/cysteine","display_name":"Cysteine","score":0.500593900680542},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4699314534664154},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.45133572816848755},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.44109857082366943},{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.43460166454315186},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.41926777362823486},{"id":"https://openalex.org/keywords/protein-sequencing","display_name":"Protein sequencing","score":0.41489145159721375},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.32269105315208435},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.29053738713264465},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.24196922779083252},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.19681549072265625},{"id":"https://openalex.org/keywords/enzyme","display_name":"Enzyme","score":0.10786888003349304}],"concepts":[{"id":"https://openalex.org/C202264299","wikidata":"https://www.wikidata.org/wiki/Q905695","display_name":"UniProt","level":3,"score":0.8151743412017822},{"id":"https://openalex.org/C2779201268","wikidata":"https://www.wikidata.org/wiki/Q186474","display_name":"Cysteine","level":3,"score":0.500593900680542},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4699314534664154},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.45133572816848755},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.44109857082366943},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.43460166454315186},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.41926777362823486},{"id":"https://openalex.org/C10010492","wikidata":"https://www.wikidata.org/wiki/Q3142557","display_name":"Protein sequencing","level":4,"score":0.41489145159721375},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.32269105315208435},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.29053738713264465},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.24196922779083252},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.19681549072265625},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.10786888003349304}],"mesh":[{"descriptor_ui":"D003545","descriptor_name":"Cysteine","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D003545","descriptor_name":"Cysteine","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D003545","descriptor_name":"Cysteine","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D003545","descriptor_name":"Cysteine","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D003545","descriptor_name":"Cysteine","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D003545","descriptor_name":"Cysteine","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D009569","descriptor_name":"Nitric Oxide","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009569","descriptor_name":"Nitric Oxide","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009569","descriptor_name":"Nitric Oxide","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/bts436","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts436","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/17/2293/48871916/bioinformatics_28_17_2293.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22782549","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22782549","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bts436","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts436","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/17/2293/48871916/bioinformatics_28_17_2293.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2468221454","display_name":null,"funder_award_id":"NSC100-2911-I-009-101","funder_id":"https://openalex.org/F4320321040","funder_display_name":"National Science Council"},{"id":"https://openalex.org/G6830196751","display_name":null,"funder_award_id":"NSC-100-2627-M-001-003","funder_id":"https://openalex.org/F4320321040","funder_display_name":"National Science Council"}],"funders":[{"id":"https://openalex.org/F4320321040","display_name":"National Science Council","ror":"https://ror.org/02kv4zf79"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2110181121.pdf","grobid_xml":"https://content.openalex.org/works/W2110181121.grobid-xml"},"referenced_works_count":37,"referenced_works":["https://openalex.org/W1269597682","https://openalex.org/W1492951734","https://openalex.org/W1560571961","https://openalex.org/W1974217925","https://openalex.org/W1976299061","https://openalex.org/W1986320888","https://openalex.org/W1989064680","https://openalex.org/W2002979560","https://openalex.org/W2007805002","https://openalex.org/W2022595505","https://openalex.org/W2049860136","https://openalex.org/W2065773243","https://openalex.org/W2080616631","https://openalex.org/W2085035881","https://openalex.org/W2086518087","https://openalex.org/W2098376021","https://openalex.org/W2100683979","https://openalex.org/W2104804534","https://openalex.org/W2105970121","https://openalex.org/W2107644675","https://openalex.org/W2109021234","https://openalex.org/W2121417968","https://openalex.org/W2121921924","https://openalex.org/W2123311108","https://openalex.org/W2129137060","https://openalex.org/W2131675399","https://openalex.org/W2133161448","https://openalex.org/W2141214120","https://openalex.org/W2142529984","https://openalex.org/W2150271494","https://openalex.org/W2158402737","https://openalex.org/W2161062388","https://openalex.org/W2162172965","https://openalex.org/W2164412127","https://openalex.org/W2168316093","https://openalex.org/W2170441710","https://openalex.org/W6647044350"],"related_works":["https://openalex.org/W2161189461","https://openalex.org/W2972635466","https://openalex.org/W2803517106","https://openalex.org/W1967142621","https://openalex.org/W1994428965","https://openalex.org/W2106830745","https://openalex.org/W4240507550","https://openalex.org/W2161062388","https://openalex.org/W2095400231","https://openalex.org/W1562094137"],"abstract_inverted_index":{"UNLABELLED:":[0],"S-nitrosylation":[1,73],"(SNO),":[2],"a":[3,43,118],"selective":[4],"and":[5,30,40,92,153,166,179,184],"reversible":[6],"protein":[7,27,38,146,177,182],"post-translational":[8],"modification":[9],"that":[10],"involves":[11],"the":[12,20,52,67,82,103,124,127,133,144,150,160,170],"covalent":[13],"attachment":[14],"of":[15,23,54,69,136,156,172],"nitric":[16],"oxide":[17],"(NO)":[18],"to":[19,33,50,66,87,93,99,143],"sulfur":[21],"atom":[22],"cysteine,":[24],"critically":[25],"regulates":[26],"activity,":[28],"localization":[29],"stability.":[31],"Due":[32],"its":[34],"importance":[35],"in":[36],"regulating":[37],"functions":[39],"cell":[41],"signaling,":[42],"mass":[44],"spectrometry-based":[45],"proteomics":[46],"method":[47],"rapidly":[48],"evolved":[49],"increase":[51],"dataset":[53],"experimentally":[55,71,109],"determined":[56],"SNO":[57,158],"sites.":[58],"However,":[59],"there":[60],"is":[61,85,190,199],"currently":[62],"no":[63],"database":[64,84,162,197],"dedicated":[65],"integration":[68],"all":[70,89],"verified":[72,110],"sites":[74],"with":[75],"their":[76,95],"structural":[77,96,151,165],"or":[78],"functional":[79,167],"information.":[80],"Thus,":[81],"dbSNO":[83,104,161,189],"created":[86],"integrate":[88],"available":[90],"datasets":[91],"provide":[94],"analysis.":[97],"Up":[98],"April":[100],"15,":[101],"2012,":[102],"has":[105],"manually":[106],"accumulated":[107],">3000":[108],"S-nitrosylated":[111,139],"peptides":[112,140],"from":[113,130,207],"219":[114],"research":[115,210],"articles":[116],"using":[117],"text":[119],"mining":[120],"approach.":[121],"To":[122,148],"solve":[123],"heterogeneity":[125],"among":[126],"data":[128,205],"collected":[129],"different":[131],"sources,":[132],"sequence":[134],"identity":[135],"these":[137,157],"reported":[138],"are":[141],"mapped":[142],"UniProtKB":[145],"entries.":[147],"delineate":[149],"correlation":[152],"consensus":[154],"motif":[155],"sites,":[159,174],"also":[163],"provides":[164],"analyses,":[168],"including":[169],"motifs":[171],"substrate":[173],"solvent":[175],"accessibility,":[176],"secondary":[178],"tertiary":[180],"structures,":[181],"domains":[183],"gene":[185],"ontology.":[186],"AVAILABILITY:":[187],"The":[188,196],"now":[191],"freely":[192],"accessible":[193],"via":[194],"http://dbSNO.mbc.nctu.edu.tw.":[195],"content":[198],"regularly":[200],"updated":[201],"upon":[202],"collecting":[203],"new":[204],"obtained":[206],"continuously":[208],"surveying":[209],"articles.":[211]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":5},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":7},{"year":2016,"cited_by_count":9},{"year":2015,"cited_by_count":9},{"year":2014,"cited_by_count":10},{"year":2013,"cited_by_count":11},{"year":2012,"cited_by_count":3}],"updated_date":"2026-08-19T15:00:24.278416","created_date":"2016-06-24T00:00:00"}
