{"id":"https://openalex.org/W2144283851","doi":"https://doi.org/10.1093/bioinformatics/bts334","title":"Bellerophontes: an RNA-Seq data analysis framework for chimeric transcripts discovery based on accurate fusion model","display_name":"Bellerophontes: an RNA-Seq data analysis framework for chimeric transcripts discovery based on accurate fusion model","publication_year":2012,"publication_date":"2012-06-17","ids":{"openalex":"https://openalex.org/W2144283851","doi":"https://doi.org/10.1093/bioinformatics/bts334","mag":"2144283851","pmid":"https://pubmed.ncbi.nlm.nih.gov/22711792"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bts334","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts334","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/16/2114/48871263/bioinformatics_28_16_2114.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/28/16/2114/48871263/bioinformatics_28_16_2114.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5002649650","display_name":"Francesco Abate","orcid":"https://orcid.org/0000-0002-5665-1828"},"institutions":[{"id":"https://openalex.org/I177477856","display_name":"Polytechnic University of Turin","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]},{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Francesco Abate","raw_affiliation_strings":["1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy"],"affiliations":[{"raw_affiliation_string":"1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy","institution_ids":["https://openalex.org/I9360294","https://openalex.org/I177477856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031653904","display_name":"Andrea Acquaviva","orcid":"https://orcid.org/0000-0002-7323-759X"},"institutions":[{"id":"https://openalex.org/I177477856","display_name":"Polytechnic University of Turin","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]},{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Andrea Acquaviva","raw_affiliation_strings":["1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy"],"affiliations":[{"raw_affiliation_string":"1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy","institution_ids":["https://openalex.org/I9360294","https://openalex.org/I177477856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075195788","display_name":"Giulia Paciello","orcid":null},"institutions":[{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]},{"id":"https://openalex.org/I177477856","display_name":"Polytechnic University of Turin","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giulia Paciello","raw_affiliation_strings":["1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy"],"affiliations":[{"raw_affiliation_string":"1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy","institution_ids":["https://openalex.org/I9360294","https://openalex.org/I177477856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059435685","display_name":"Carmelo Foti","orcid":null},"institutions":[{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]},{"id":"https://openalex.org/I177477856","display_name":"Polytechnic University of Turin","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Carmelo Foti","raw_affiliation_strings":["1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy"],"affiliations":[{"raw_affiliation_string":"1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy","institution_ids":["https://openalex.org/I9360294","https://openalex.org/I177477856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068452817","display_name":"Elisa Ficarra","orcid":"https://orcid.org/0000-0002-8061-2124"},"institutions":[{"id":"https://openalex.org/I177477856","display_name":"Polytechnic University of Turin","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]},{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Elisa Ficarra","raw_affiliation_strings":["1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy"],"affiliations":[{"raw_affiliation_string":"1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy","institution_ids":["https://openalex.org/I9360294","https://openalex.org/I177477856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066231561","display_name":"Alberto Ferrarini","orcid":"https://orcid.org/0000-0002-8452-3380"},"institutions":[{"id":"https://openalex.org/I177477856","display_name":"Polytechnic University of Turin","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]},{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Alberto Ferrarini","raw_affiliation_strings":["1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy"],"affiliations":[{"raw_affiliation_string":"1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy","institution_ids":["https://openalex.org/I9360294","https://openalex.org/I177477856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050686627","display_name":"Massimo Delledonne","orcid":"https://orcid.org/0000-0002-7100-4581"},"institutions":[{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]},{"id":"https://openalex.org/I177477856","display_name":"Polytechnic University of Turin","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Massimo Delledonne","raw_affiliation_strings":["1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy"],"affiliations":[{"raw_affiliation_string":"1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy","institution_ids":["https://openalex.org/I9360294","https://openalex.org/I177477856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060457186","display_name":"Ilaria Iacobucci","orcid":"https://orcid.org/0000-0003-2008-1365"},"institutions":[{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]},{"id":"https://openalex.org/I177477856","display_name":"Polytechnic University of Turin","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Ilaria Iacobucci","raw_affiliation_strings":["1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy"],"affiliations":[{"raw_affiliation_string":"1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy","institution_ids":["https://openalex.org/I9360294","https://openalex.org/I177477856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016041461","display_name":"Simona Soverini","orcid":"https://orcid.org/0000-0002-4508-0353"},"institutions":[{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]},{"id":"https://openalex.org/I177477856","display_name":"Polytechnic University of Turin","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Simona Soverini","raw_affiliation_strings":["1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy"],"affiliations":[{"raw_affiliation_string":"1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy","institution_ids":["https://openalex.org/I9360294","https://openalex.org/I177477856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073761054","display_name":"Giovanni Martinelli","orcid":"https://orcid.org/0000-0002-1025-4210"},"institutions":[{"id":"https://openalex.org/I177477856","display_name":"Polytechnic University of Turin","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]},{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giovanni Martinelli","raw_affiliation_strings":["1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy"],"affiliations":[{"raw_affiliation_string":"1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy","institution_ids":["https://openalex.org/I9360294","https://openalex.org/I177477856"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5005432629","display_name":"Enrico Macii","orcid":"https://orcid.org/0000-0001-9046-5618"},"institutions":[{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]},{"id":"https://openalex.org/I177477856","display_name":"Polytechnic University of Turin","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Enrico Macii","raw_affiliation_strings":["1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy"],"affiliations":[{"raw_affiliation_string":"1 Department of Control and Computer Engineering, Politecnico di Torino, Torino 10129, Italy 2Department of Biotechnology, Universit\u00e0 di Verona, Verona 37134, Italy 3Institute of Medical Oncology and Hematology, Universit\u00e0 di Bologna, Bologna 40138, Italy","institution_ids":["https://openalex.org/I9360294","https://openalex.org/I177477856"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5002649650"],"corresponding_institution_ids":["https://openalex.org/I177477856","https://openalex.org/I9360294"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.8387,"has_fulltext":false,"cited_by_count":42,"citation_normalized_percentile":{"value":0.85352248,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"28","issue":"16","first_page":"2114","last_page":"2121"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6308972239494324},{"id":"https://openalex.org/keywords/rna-splicing","display_name":"RNA splicing","score":0.5553478598594666},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5092753171920776},{"id":"https://openalex.org/keywords/fusion-gene","display_name":"Fusion gene","score":0.5048052072525024},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4921655058860779},{"id":"https://openalex.org/keywords/perl","display_name":"Perl","score":0.48604828119277954},{"id":"https://openalex.org/keywords/fusion-transcript","display_name":"Fusion transcript","score":0.47570547461509705},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.44554391503334045},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4338533282279968},{"id":"https://openalex.org/keywords/sequence-analysis","display_name":"Sequence analysis","score":0.43287163972854614},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.41908344626426697},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3737044036388397},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.29546570777893066},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.229145348072052}],"concepts":[{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6308972239494324},{"id":"https://openalex.org/C54458228","wikidata":"https://www.wikidata.org/wiki/Q237218","display_name":"RNA splicing","level":4,"score":0.5553478598594666},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5092753171920776},{"id":"https://openalex.org/C111829193","wikidata":"https://www.wikidata.org/wiki/Q1108970","display_name":"Fusion gene","level":3,"score":0.5048052072525024},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4921655058860779},{"id":"https://openalex.org/C2777002779","wikidata":"https://www.wikidata.org/wiki/Q42478","display_name":"Perl","level":2,"score":0.48604828119277954},{"id":"https://openalex.org/C2778274637","wikidata":"https://www.wikidata.org/wiki/Q5510282","display_name":"Fusion transcript","level":4,"score":0.47570547461509705},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.44554391503334045},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4338533282279968},{"id":"https://openalex.org/C61053724","wikidata":"https://www.wikidata.org/wiki/Q1154615","display_name":"Sequence analysis","level":3,"score":0.43287163972854614},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.41908344626426697},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3737044036388397},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.29546570777893066},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.229145348072052},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012326","descriptor_name":"RNA Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012326","descriptor_name":"RNA Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012326","descriptor_name":"RNA Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015464","descriptor_name":"Leukemia, Myelogenous, Chronic, BCR-ABL Positive","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015464","descriptor_name":"Leukemia, Myelogenous, Chronic, BCR-ABL Positive","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015464","descriptor_name":"Leukemia, Myelogenous, Chronic, BCR-ABL Positive","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D050939","descriptor_name":"Gene Fusion","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D050939","descriptor_name":"Gene Fusion","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D050939","descriptor_name":"Gene Fusion","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/bts334","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts334","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/16/2114/48871263/bioinformatics_28_16_2114.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22711792","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22711792","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:cris.unibo.it:11585/129112","is_oa":false,"landing_page_url":"http://hdl.handle.net/11585/129112","pdf_url":null,"source":{"id":"https://openalex.org/S4306402579","display_name":"Archivio istituzionale della ricerca (Alma Mater Studiorum Universit\u00e0 di Bologna)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210117483","host_organization_name":"Istituto di Ematologia di Bologna","host_organization_lineage":["https://openalex.org/I4210117483"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:iris.unimore.it:11380/1240314","is_oa":true,"landing_page_url":"http://hdl.handle.net/11380/1240314","pdf_url":null,"source":{"id":"https://openalex.org/S4306400718","display_name":"IRIS UNIMORE (University of Modena and Reggio Emilia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I122346577","host_organization_name":"University of Modena and Reggio Emilia","host_organization_lineage":["https://openalex.org/I122346577"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:zenodo.org:100747","is_oa":true,"landing_page_url":"https://www.openaccessrepository.it/record/100747","pdf_url":null,"source":{"id":"https://openalex.org/S4306402478","display_name":"INFM-OAR (INFN Catania)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210116497","host_organization_name":"Istituto Nazionale di Fisica Nucleare, Sezione di Catania","host_organization_lineage":["https://openalex.org/I4210116497"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bts334","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts334","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/16/2114/48871263/bioinformatics_28_16_2114.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4099999964237213,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2144283851.pdf","grobid_xml":"https://content.openalex.org/works/W2144283851.grobid-xml"},"referenced_works_count":22,"referenced_works":["https://openalex.org/W1485571925","https://openalex.org/W2029623390","https://openalex.org/W2047933345","https://openalex.org/W2052297191","https://openalex.org/W2064469303","https://openalex.org/W2088612061","https://openalex.org/W2090823859","https://openalex.org/W2097065948","https://openalex.org/W2103569192","https://openalex.org/W2114289944","https://openalex.org/W2117112774","https://openalex.org/W2124887618","https://openalex.org/W2124985265","https://openalex.org/W2126144698","https://openalex.org/W2127640118","https://openalex.org/W2129838986","https://openalex.org/W2137084536","https://openalex.org/W2141458291","https://openalex.org/W2163401417","https://openalex.org/W2166422007","https://openalex.org/W2169810552","https://openalex.org/W6628922508"],"related_works":["https://openalex.org/W1501720035","https://openalex.org/W2010507532","https://openalex.org/W2911167977","https://openalex.org/W2350670584","https://openalex.org/W59832779","https://openalex.org/W2161099760","https://openalex.org/W2321864840","https://openalex.org/W2489687894","https://openalex.org/W1986850084","https://openalex.org/W72388909"],"abstract_inverted_index":{"Bellerophontes":[0],"JAVA/Perl/Bash":[1],"software":[2],"implementation":[3],"is":[4],"free":[5],"and":[6],"available":[7],"at":[8],"http://eda.polito.it/bellerophontes/.":[9]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":7},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":5}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
