{"id":"https://openalex.org/W2122686130","doi":"https://doi.org/10.1093/bioinformatics/bts254","title":"Fast and sensitive mapping of bisulfite-treated sequencing data","display_name":"Fast and sensitive mapping of bisulfite-treated sequencing data","publication_year":2012,"publication_date":"2012-05-10","ids":{"openalex":"https://openalex.org/W2122686130","doi":"https://doi.org/10.1093/bioinformatics/bts254","mag":"2122686130","pmid":"https://pubmed.ncbi.nlm.nih.gov/22581174"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bts254","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts254","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/13/1698/48866872/bioinformatics_28_13_1698.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/28/13/1698/48866872/bioinformatics_28_13_1698.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5024108079","display_name":"Christian Otto","orcid":"https://orcid.org/0000-0001-6231-9648"},"institutions":[{"id":"https://openalex.org/I4210145647","display_name":"Fraunhofer Institute for Cell Therapy and Immunology","ror":"https://ror.org/04x45f476","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210145647","https://openalex.org/I4923324"]},{"id":"https://openalex.org/I4210119712","display_name":"Max Planck Institute for Mathematics","ror":"https://ror.org/02dh8ja68","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210119712"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Christian Otto","raw_affiliation_strings":["1 Interdisciplinary Center for Bioinformatics and Bioinformatics Group, Department of Computer Science, University Leipzig, 04107 Leipzig, Germany, 2Transcriptome Bioinformatics Group, LIFE \u2014 Leipzig Research Center for Civilization Diseases, University Leipzig, 04107 Leipzig, Germany, 3RNomics Group, Fraunhofer Institute for Cell Therapy and Immunology, 04103 Leipzig, Germany, 4Santa Fe Institute, Santa Fe, NM 87501 USA, 5Department of Theoretical Chemistry, University of Vienna, A-1090 Vienna, Austria and 6Max-Planck-Institute for Mathematics in Sciences, 04103 Leipzig, Germany"],"affiliations":[{"raw_affiliation_string":"1 Interdisciplinary Center for Bioinformatics and Bioinformatics Group, Department of Computer Science, University Leipzig, 04107 Leipzig, Germany, 2Transcriptome Bioinformatics Group, LIFE \u2014 Leipzig Research Center for Civilization Diseases, University Leipzig, 04107 Leipzig, Germany, 3RNomics Group, Fraunhofer Institute for Cell Therapy and Immunology, 04103 Leipzig, Germany, 4Santa Fe Institute, Santa Fe, NM 87501 USA, 5Department of Theoretical Chemistry, University of Vienna, A-1090 Vienna, Austria and 6Max-Planck-Institute for Mathematics in Sciences, 04103 Leipzig, Germany","institution_ids":["https://openalex.org/I4210119712","https://openalex.org/I4210145647"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016104736","display_name":"Peter F. Stadler","orcid":"https://orcid.org/0000-0002-5016-5191"},"institutions":[{"id":"https://openalex.org/I4210145647","display_name":"Fraunhofer Institute for Cell Therapy and Immunology","ror":"https://ror.org/04x45f476","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210145647","https://openalex.org/I4923324"]},{"id":"https://openalex.org/I4210119712","display_name":"Max Planck Institute for Mathematics","ror":"https://ror.org/02dh8ja68","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210119712"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Peter F. Stadler","raw_affiliation_strings":["1 Interdisciplinary Center for Bioinformatics and Bioinformatics Group, Department of Computer Science, University Leipzig, 04107 Leipzig, Germany, 2Transcriptome Bioinformatics Group, LIFE \u2014 Leipzig Research Center for Civilization Diseases, University Leipzig, 04107 Leipzig, Germany, 3RNomics Group, Fraunhofer Institute for Cell Therapy and Immunology, 04103 Leipzig, Germany, 4Santa Fe Institute, Santa Fe, NM 87501 USA, 5Department of Theoretical Chemistry, University of Vienna, A-1090 Vienna, Austria and 6Max-Planck-Institute for Mathematics in Sciences, 04103 Leipzig, Germany"],"affiliations":[{"raw_affiliation_string":"1 Interdisciplinary Center for Bioinformatics and Bioinformatics Group, Department of Computer Science, University Leipzig, 04107 Leipzig, Germany, 2Transcriptome Bioinformatics Group, LIFE \u2014 Leipzig Research Center for Civilization Diseases, University Leipzig, 04107 Leipzig, Germany, 3RNomics Group, Fraunhofer Institute for Cell Therapy and Immunology, 04103 Leipzig, Germany, 4Santa Fe Institute, Santa Fe, NM 87501 USA, 5Department of Theoretical Chemistry, University of Vienna, A-1090 Vienna, Austria and 6Max-Planck-Institute for Mathematics in Sciences, 04103 Leipzig, Germany","institution_ids":["https://openalex.org/I4210119712","https://openalex.org/I4210145647"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5070930800","display_name":"Steve Hoffmann","orcid":"https://orcid.org/0000-0002-5239-7201"},"institutions":[{"id":"https://openalex.org/I4210145647","display_name":"Fraunhofer Institute for Cell Therapy and Immunology","ror":"https://ror.org/04x45f476","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210145647","https://openalex.org/I4923324"]},{"id":"https://openalex.org/I4210119712","display_name":"Max Planck Institute for Mathematics","ror":"https://ror.org/02dh8ja68","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210119712"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Steve Hoffmann","raw_affiliation_strings":["1 Interdisciplinary Center for Bioinformatics and Bioinformatics Group, Department of Computer Science, University Leipzig, 04107 Leipzig, Germany, 2Transcriptome Bioinformatics Group, LIFE \u2014 Leipzig Research Center for Civilization Diseases, University Leipzig, 04107 Leipzig, Germany, 3RNomics Group, Fraunhofer Institute for Cell Therapy and Immunology, 04103 Leipzig, Germany, 4Santa Fe Institute, Santa Fe, NM 87501 USA, 5Department of Theoretical Chemistry, University of Vienna, A-1090 Vienna, Austria and 6Max-Planck-Institute for Mathematics in Sciences, 04103 Leipzig, Germany"],"affiliations":[{"raw_affiliation_string":"1 Interdisciplinary Center for Bioinformatics and Bioinformatics Group, Department of Computer Science, University Leipzig, 04107 Leipzig, Germany, 2Transcriptome Bioinformatics Group, LIFE \u2014 Leipzig Research Center for Civilization Diseases, University Leipzig, 04107 Leipzig, Germany, 3RNomics Group, Fraunhofer Institute for Cell Therapy and Immunology, 04103 Leipzig, Germany, 4Santa Fe Institute, Santa Fe, NM 87501 USA, 5Department of Theoretical Chemistry, University of Vienna, A-1090 Vienna, Austria and 6Max-Planck-Institute for Mathematics in Sciences, 04103 Leipzig, Germany","institution_ids":["https://openalex.org/I4210119712","https://openalex.org/I4210145647"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5024108079"],"corresponding_institution_ids":["https://openalex.org/I4210119712","https://openalex.org/I4210145647"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":2.0169,"has_fulltext":true,"cited_by_count":49,"citation_normalized_percentile":{"value":0.86659766,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"28","issue":"13","first_page":"1698","last_page":"1704"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9736999869346619,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.957099974155426,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bisulfite","display_name":"Bisulfite","score":0.8234038352966309},{"id":"https://openalex.org/keywords/bisulfite-sequencing","display_name":"Bisulfite sequencing","score":0.7627164125442505},{"id":"https://openalex.org/keywords/sodium-bisulfite","display_name":"Sodium bisulfite","score":0.7093247771263123},{"id":"https://openalex.org/keywords/dna-methylation","display_name":"DNA methylation","score":0.634319007396698},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5235169529914856},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5071737766265869},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.46929413080215454},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4656316637992859},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.4245874285697937},{"id":"https://openalex.org/keywords/epigenetics","display_name":"Epigenetics","score":0.41538766026496887},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3958209156990051},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.34417325258255005},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2260199785232544},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.09834980964660645},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.07624396681785583}],"concepts":[{"id":"https://openalex.org/C2775959680","wikidata":"https://www.wikidata.org/wiki/Q2718222","display_name":"Bisulfite","level":5,"score":0.8234038352966309},{"id":"https://openalex.org/C189235521","wikidata":"https://www.wikidata.org/wiki/Q4087270","display_name":"Bisulfite sequencing","level":5,"score":0.7627164125442505},{"id":"https://openalex.org/C2775959488","wikidata":"https://www.wikidata.org/wiki/Q407891","display_name":"Sodium bisulfite","level":2,"score":0.7093247771263123},{"id":"https://openalex.org/C190727270","wikidata":"https://www.wikidata.org/wiki/Q874745","display_name":"DNA methylation","level":4,"score":0.634319007396698},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5235169529914856},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5071737766265869},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.46929413080215454},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4656316637992859},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.4245874285697937},{"id":"https://openalex.org/C41091548","wikidata":"https://www.wikidata.org/wiki/Q26939","display_name":"Epigenetics","level":3,"score":0.41538766026496887},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3958209156990051},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.34417325258255005},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2260199785232544},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.09834980964660645},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.07624396681785583},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003596","descriptor_name":"Cytosine","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D003596","descriptor_name":"Cytosine","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D003596","descriptor_name":"Cytosine","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013447","descriptor_name":"Sulfites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013447","descriptor_name":"Sulfites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013447","descriptor_name":"Sulfites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/bts254","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts254","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/13/1698/48866872/bioinformatics_28_13_1698.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22581174","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22581174","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.1008.2709","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.1008.2709","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.oxfordjournals.org/content/early/2012/05/10/bioinformatics.bts254.full.pdf","raw_type":"text"},{"id":"pmh:oai:edoc.mpg.de:645560","is_oa":false,"landing_page_url":"http://edoc.mpg.de/645560","pdf_url":null,"source":{"id":"https://openalex.org/S4406922265","display_name":"Max Planck Institute for Plasma Physics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, v.28, 1698-1704 (2012)","raw_type":"Article"},{"id":"pmh:oai:publica.fraunhofer.de:publica/229261","is_oa":false,"landing_page_url":"https://publica.fraunhofer.de/handle/publica/229261","pdf_url":null,"source":{"id":"https://openalex.org/S4306400318","display_name":"Fraunhofer-Publica (Fraunhofer-Gesellschaft)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4923324","host_organization_name":"Fraunhofer-Gesellschaft","host_organization_lineage":["https://openalex.org/I4923324"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"journal article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bts254","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts254","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/13/1698/48866872/bioinformatics_28_13_1698.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2631452109","display_name":null,"funder_award_id":"(ERDF)","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"},{"id":"https://openalex.org/G3875748329","display_name":null,"funder_award_id":"European Regional Development Fund","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G4977106383","display_name":null,"funder_award_id":"European Regional Development Fund (ERDF)","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G8538941428","display_name":null,"funder_award_id":"Regional Development Fund","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"},{"id":"https://openalex.org/F4320325298","display_name":"Universit\u00e4t Leipzig","ror":"https://ror.org/03s7gtk40"},{"id":"https://openalex.org/F4320328735","display_name":"Freistaat Sachsen","ror":null},{"id":"https://openalex.org/F4320335322","display_name":"European Regional Development Fund","ror":"https://ror.org/00k4n6c32"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2122686130.pdf","grobid_xml":"https://content.openalex.org/works/W2122686130.grobid-xml"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W117230746","https://openalex.org/W1531394859","https://openalex.org/W1599313687","https://openalex.org/W1964797108","https://openalex.org/W1976626368","https://openalex.org/W1979273476","https://openalex.org/W1989568035","https://openalex.org/W1990937720","https://openalex.org/W2003680373","https://openalex.org/W2019229253","https://openalex.org/W2029197798","https://openalex.org/W2059099579","https://openalex.org/W2067130606","https://openalex.org/W2069717852","https://openalex.org/W2100751585","https://openalex.org/W2101259235","https://openalex.org/W2101920472","https://openalex.org/W2106285921","https://openalex.org/W2106340111","https://openalex.org/W2106889224","https://openalex.org/W2108234281","https://openalex.org/W2111310368","https://openalex.org/W2111465765","https://openalex.org/W2112113834","https://openalex.org/W2113588666","https://openalex.org/W2115936826","https://openalex.org/W2118703123","https://openalex.org/W2121090755","https://openalex.org/W2124985265","https://openalex.org/W2125154191","https://openalex.org/W2126711065","https://openalex.org/W2128793361","https://openalex.org/W2131374955","https://openalex.org/W2131871062","https://openalex.org/W2134283755","https://openalex.org/W2156330112","https://openalex.org/W2157057843","https://openalex.org/W2170258388","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2039097638","https://openalex.org/W2087999257","https://openalex.org/W1966904860","https://openalex.org/W2156167910","https://openalex.org/W2008376810","https://openalex.org/W1965301144","https://openalex.org/W2115046713","https://openalex.org/W2134949149","https://openalex.org/W4237395025","https://openalex.org/W2167056069"],"abstract_inverted_index":{"The":[0],"software":[1],"segemehl":[2],"is":[3],"freely":[4],"available":[5],"at":[6],"http://www.bioinf.uni-leipzig.de/Software/segemehl.":[7]},"counts_by_year":[{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":8},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
