{"id":"https://openalex.org/W2043354452","doi":"https://doi.org/10.1093/bioinformatics/bts253","title":"Ka-me: a Voronoi image analyzer","display_name":"Ka-me: a Voronoi image analyzer","publication_year":2012,"publication_date":"2012-05-03","ids":{"openalex":"https://openalex.org/W2043354452","doi":"https://doi.org/10.1093/bioinformatics/bts253","mag":"2043354452","pmid":"https://pubmed.ncbi.nlm.nih.gov/22556369"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bts253","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts253","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/13/1802/48868448/bioinformatics_28_13_1802.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/28/13/1802/48868448/bioinformatics_28_13_1802.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5023072399","display_name":"Noppadon Khiripet","orcid":null},"institutions":[{"id":"https://openalex.org/I76369901","display_name":"Beloit College","ror":"https://ror.org/009yr1d55","country_code":"US","type":"education","lineage":["https://openalex.org/I76369901"]},{"id":"https://openalex.org/I14316845","display_name":"National Electronics and Computer Technology Center","ror":"https://ror.org/04z82ry91","country_code":"TH","type":"government","lineage":["https://openalex.org/I1332092204","https://openalex.org/I14316845"]}],"countries":["TH","US"],"is_corresponding":true,"raw_author_name":"Noppadon Khiripet","raw_affiliation_strings":["1 \u00a0, \u00a0*Knowledge Elicitation and Archiving Laboratory, National Electronics and Computer Technology Center (NECTEC), 112 Phahon Yothin Rd., Klong 1, Klong Luang, Pathumthani 12120, Thailand and 2Department of Biology, Beloit College, 700 College Street, Beloit, WI 53511, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a0, \u00a0*Knowledge Elicitation and Archiving Laboratory, National Electronics and Computer Technology Center (NECTEC), 112 Phahon Yothin Rd., Klong 1, Klong Luang, Pathumthani 12120, Thailand and 2Department of Biology, Beloit College, 700 College Street, Beloit, WI 53511, USA","institution_ids":["https://openalex.org/I14316845","https://openalex.org/I76369901"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021591984","display_name":"Wongarnet Khantuwan","orcid":null},"institutions":[{"id":"https://openalex.org/I14316845","display_name":"National Electronics and Computer Technology Center","ror":"https://ror.org/04z82ry91","country_code":"TH","type":"government","lineage":["https://openalex.org/I1332092204","https://openalex.org/I14316845"]},{"id":"https://openalex.org/I76369901","display_name":"Beloit College","ror":"https://ror.org/009yr1d55","country_code":"US","type":"education","lineage":["https://openalex.org/I76369901"]}],"countries":["TH","US"],"is_corresponding":false,"raw_author_name":"Wongarnet Khantuwan","raw_affiliation_strings":["1 \u00a0, \u00a0*Knowledge Elicitation and Archiving Laboratory, National Electronics and Computer Technology Center (NECTEC), 112 Phahon Yothin Rd., Klong 1, Klong Luang, Pathumthani 12120, Thailand and 2Department of Biology, Beloit College, 700 College Street, Beloit, WI 53511, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a0, \u00a0*Knowledge Elicitation and Archiving Laboratory, National Electronics and Computer Technology Center (NECTEC), 112 Phahon Yothin Rd., Klong 1, Klong Luang, Pathumthani 12120, Thailand and 2Department of Biology, Beloit College, 700 College Street, Beloit, WI 53511, USA","institution_ids":["https://openalex.org/I14316845","https://openalex.org/I76369901"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5013586150","display_name":"John R. Jungck","orcid":"https://orcid.org/0000-0003-4621-5333"},"institutions":[{"id":"https://openalex.org/I76369901","display_name":"Beloit College","ror":"https://ror.org/009yr1d55","country_code":"US","type":"education","lineage":["https://openalex.org/I76369901"]},{"id":"https://openalex.org/I14316845","display_name":"National Electronics and Computer Technology Center","ror":"https://ror.org/04z82ry91","country_code":"TH","type":"government","lineage":["https://openalex.org/I1332092204","https://openalex.org/I14316845"]}],"countries":["TH","US"],"is_corresponding":false,"raw_author_name":"John R. Jungck","raw_affiliation_strings":["1 \u00a0, \u00a0*Knowledge Elicitation and Archiving Laboratory, National Electronics and Computer Technology Center (NECTEC), 112 Phahon Yothin Rd., Klong 1, Klong Luang, Pathumthani 12120, Thailand and 2Department of Biology, Beloit College, 700 College Street, Beloit, WI 53511, USA"],"affiliations":[{"raw_affiliation_string":"1 \u00a0, \u00a0*Knowledge Elicitation and Archiving Laboratory, National Electronics and Computer Technology Center (NECTEC), 112 Phahon Yothin Rd., Klong 1, Klong Luang, Pathumthani 12120, Thailand and 2Department of Biology, Beloit College, 700 College Street, Beloit, WI 53511, USA","institution_ids":["https://openalex.org/I14316845","https://openalex.org/I76369901"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5023072399"],"corresponding_institution_ids":["https://openalex.org/I76369901","https://openalex.org/I14316845"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.63101993,"has_fulltext":true,"cited_by_count":22,"citation_normalized_percentile":{"value":0.8482067,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"28","issue":"13","first_page":"1802","last_page":"1804"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10770","display_name":"Soil Geostatistics and Mapping","score":0.9767000079154968,"subfield":{"id":"https://openalex.org/subfields/2305","display_name":"Environmental Engineering"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11164","display_name":"Remote Sensing and LiDAR Applications","score":0.9764999747276306,"subfield":{"id":"https://openalex.org/subfields/2305","display_name":"Environmental Engineering"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/voronoi-diagram","display_name":"Voronoi diagram","score":0.8756502866744995},{"id":"https://openalex.org/keywords/delaunay-triangulation","display_name":"Delaunay triangulation","score":0.7886618375778198},{"id":"https://openalex.org/keywords/tessellation","display_name":"Tessellation (computer graphics)","score":0.6723850965499878},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5038425326347351},{"id":"https://openalex.org/keywords/regular-polygon","display_name":"Regular polygon","score":0.4606480896472931},{"id":"https://openalex.org/keywords/k-nearest-neighbors-algorithm","display_name":"k-nearest neighbors algorithm","score":0.414999783039093},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.37634575366973877},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.27996861934661865},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.25139671564102173},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.22789797186851501},{"id":"https://openalex.org/keywords/geometry","display_name":"Geometry","score":0.22167301177978516}],"concepts":[{"id":"https://openalex.org/C24881265","wikidata":"https://www.wikidata.org/wiki/Q757267","display_name":"Voronoi diagram","level":2,"score":0.8756502866744995},{"id":"https://openalex.org/C68010082","wikidata":"https://www.wikidata.org/wiki/Q192445","display_name":"Delaunay triangulation","level":2,"score":0.7886618375778198},{"id":"https://openalex.org/C43817857","wikidata":"https://www.wikidata.org/wiki/Q9357547","display_name":"Tessellation (computer graphics)","level":2,"score":0.6723850965499878},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5038425326347351},{"id":"https://openalex.org/C112680207","wikidata":"https://www.wikidata.org/wiki/Q714886","display_name":"Regular polygon","level":2,"score":0.4606480896472931},{"id":"https://openalex.org/C113238511","wikidata":"https://www.wikidata.org/wiki/Q1071612","display_name":"k-nearest neighbors algorithm","level":2,"score":0.414999783039093},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.37634575366973877},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.27996861934661865},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.25139671564102173},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.22789797186851501},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.22167301177978516}],"mesh":[{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/bts253","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts253","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/13/1802/48868448/bioinformatics_28_13_1802.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22556369","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22556369","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:2386146","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3381968","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bts253","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts253","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/13/1802/48868448/bioinformatics_28_13_1802.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6899999976158142,"display_name":"Peace, Justice and strong institutions","id":"https://metadata.un.org/sdg/16"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2043354452.pdf","grobid_xml":"https://content.openalex.org/works/W2043354452.grobid-xml"},"referenced_works_count":11,"referenced_works":["https://openalex.org/W1534084636","https://openalex.org/W1974781388","https://openalex.org/W1978577675","https://openalex.org/W1981477992","https://openalex.org/W2012027557","https://openalex.org/W2036290398","https://openalex.org/W2060390553","https://openalex.org/W2110208823","https://openalex.org/W2113530039","https://openalex.org/W2115474441","https://openalex.org/W2998589874"],"related_works":["https://openalex.org/W1481755670","https://openalex.org/W2354869996","https://openalex.org/W2359751290","https://openalex.org/W2206755844","https://openalex.org/W2371448287","https://openalex.org/W2358109229","https://openalex.org/W2096247527","https://openalex.org/W431872879","https://openalex.org/W2360695371","https://openalex.org/W1997141012"],"abstract_inverted_index":{"Abstract":[0],"Summary:":[1],"Ka-me":[2],"is":[3,115],"a":[4,16,41,111],"Voronoi":[5,27,112],"image":[6,14,113],"analyzer":[7,114],"that":[8,49],"allows":[9],"users":[10],"to":[11,34,93],"analyze":[12],"any":[13,21],"with":[15,120],"convex":[17],"polygonal":[18],"tessellation":[19],"or":[20],"spatial":[22,86],"point":[23],"distribution":[24,52],"by":[25],"fitting":[26],"polygons":[28],"and":[29,46,81,91,96,106,122],"their":[30],"dual,":[31],"Delaunay":[32,64],"triangulations,":[33],"the":[35,51,54,126],"pattern.":[36],"The":[37],"analytical":[38],"tools":[39,48],"include":[40],"variety":[42],"of":[43,53,56,63],"graph":[44],"theoretic":[45],"geometric":[47],"summarize":[50],"numbers":[55],"edges":[57,66],"per":[58],"face,":[59],"areas,":[60],"perimeters,":[61],"angles":[62],"triangle":[65],"(anglograms),":[67],"Gabriel":[68],"graphs,":[69,72],"nearest":[70],"neighbor":[71],"minimal":[73],"spanning":[74],"trees,":[75,77],"Ulam":[76],"Pitteway":[78],"tests,":[79],"circumcircles":[80],"convexhulls,":[82],"as":[83,85,117],"well":[84],"statistics":[87],"(Clark\u2013Evans":[88],"Nearest":[89],"Neighborhood":[90],"Variance":[92],"Mean":[94],"Ratio)":[95],"export":[97],"functions":[98],"for":[99],"standard":[100],"relationships":[101],"(Lewis's":[102],"Law,":[103],"Desch's":[104],"Law":[105],"Aboav\u2013Weaire":[107],"Law).":[108],"Availability:":[109],"Ka-me:":[110],"available":[116],"an":[118],"executable":[119],"documentation":[121],"sample":[123],"applications":[124],"from":[125],"BioQUEST":[127],"Library":[128],"(http://bioquest.org/downloads/kame_1.0.rar).":[129],"Contact:":[130],"noppadon.khiripet@nectec.or.th":[131]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}