{"id":"https://openalex.org/W2108976255","doi":"https://doi.org/10.1093/bioinformatics/bts236","title":"Xenome\u2014a tool for classifying reads from xenograft samples","display_name":"Xenome\u2014a tool for classifying reads from xenograft samples","publication_year":2012,"publication_date":"2012-06-09","ids":{"openalex":"https://openalex.org/W2108976255","doi":"https://doi.org/10.1093/bioinformatics/bts236","mag":"2108976255","pmid":"https://pubmed.ncbi.nlm.nih.gov/22689758"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bts236","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts236","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/12/i172/48875568/bioinformatics_28_12_i172.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/28/12/i172/48875568/bioinformatics_28_12_i172.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5018655162","display_name":"Thomas Conway","orcid":null},"institutions":[{"id":"https://openalex.org/I42894916","display_name":"Data61","ror":"https://ror.org/03q397159","country_code":"AU","type":"other","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I42894916","https://openalex.org/I4387156119"]},{"id":"https://openalex.org/I60733029","display_name":"Monash Institute of Medical Research","ror":"https://ror.org/05p96ba03","country_code":"AU","type":"healthcare","lineage":["https://openalex.org/I60733029"]},{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]},{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Thomas Conway","raw_affiliation_strings":["1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia","NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and Monash Institute of Medical Research, Monash University, Clayton, Australia"],"affiliations":[{"raw_affiliation_string":"1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia","institution_ids":["https://openalex.org/I60733029","https://openalex.org/I165779595","https://openalex.org/I42894916","https://openalex.org/I56590836"]},{"raw_affiliation_string":"NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and Monash Institute of Medical Research, Monash University, Clayton, Australia","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046963746","display_name":"Jeremy Wazny","orcid":null},"institutions":[{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]},{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]},{"id":"https://openalex.org/I60733029","display_name":"Monash Institute of Medical Research","ror":"https://ror.org/05p96ba03","country_code":"AU","type":"healthcare","lineage":["https://openalex.org/I60733029"]},{"id":"https://openalex.org/I42894916","display_name":"Data61","ror":"https://ror.org/03q397159","country_code":"AU","type":"other","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I42894916","https://openalex.org/I4387156119"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Jeremy Wazny","raw_affiliation_strings":["1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia","NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia"],"affiliations":[{"raw_affiliation_string":"1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia","institution_ids":["https://openalex.org/I60733029","https://openalex.org/I165779595","https://openalex.org/I42894916","https://openalex.org/I56590836"]},{"raw_affiliation_string":"NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia","institution_ids":["https://openalex.org/I60733029","https://openalex.org/I165779595","https://openalex.org/I42894916","https://openalex.org/I56590836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018478843","display_name":"Andrew Bromage","orcid":null},"institutions":[{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]},{"id":"https://openalex.org/I60733029","display_name":"Monash Institute of Medical Research","ror":"https://ror.org/05p96ba03","country_code":"AU","type":"healthcare","lineage":["https://openalex.org/I60733029"]},{"id":"https://openalex.org/I42894916","display_name":"Data61","ror":"https://ror.org/03q397159","country_code":"AU","type":"other","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I42894916","https://openalex.org/I4387156119"]},{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Andrew Bromage","raw_affiliation_strings":["1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia","NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia"],"affiliations":[{"raw_affiliation_string":"1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia","institution_ids":["https://openalex.org/I60733029","https://openalex.org/I165779595","https://openalex.org/I42894916","https://openalex.org/I56590836"]},{"raw_affiliation_string":"NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia","institution_ids":["https://openalex.org/I60733029","https://openalex.org/I165779595","https://openalex.org/I42894916","https://openalex.org/I56590836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109868543","display_name":"Martin J. Tymms","orcid":null},"institutions":[{"id":"https://openalex.org/I42894916","display_name":"Data61","ror":"https://ror.org/03q397159","country_code":"AU","type":"other","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I42894916","https://openalex.org/I4387156119"]},{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]},{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]},{"id":"https://openalex.org/I60733029","display_name":"Monash Institute of Medical Research","ror":"https://ror.org/05p96ba03","country_code":"AU","type":"healthcare","lineage":["https://openalex.org/I60733029"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Martin Tymms","raw_affiliation_strings":["1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia","NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia"],"affiliations":[{"raw_affiliation_string":"1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia","institution_ids":["https://openalex.org/I60733029","https://openalex.org/I165779595","https://openalex.org/I42894916","https://openalex.org/I56590836"]},{"raw_affiliation_string":"NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia","institution_ids":["https://openalex.org/I60733029","https://openalex.org/I165779595","https://openalex.org/I42894916","https://openalex.org/I56590836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005477835","display_name":"Dhanya Sooraj","orcid":"https://orcid.org/0000-0002-3176-3305"},"institutions":[{"id":"https://openalex.org/I42894916","display_name":"Data61","ror":"https://ror.org/03q397159","country_code":"AU","type":"other","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I42894916","https://openalex.org/I4387156119"]},{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]},{"id":"https://openalex.org/I60733029","display_name":"Monash Institute of Medical Research","ror":"https://ror.org/05p96ba03","country_code":"AU","type":"healthcare","lineage":["https://openalex.org/I60733029"]},{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Dhanya Sooraj","raw_affiliation_strings":["1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia","NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia"],"affiliations":[{"raw_affiliation_string":"1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia","institution_ids":["https://openalex.org/I60733029","https://openalex.org/I165779595","https://openalex.org/I42894916","https://openalex.org/I56590836"]},{"raw_affiliation_string":"NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia","institution_ids":["https://openalex.org/I60733029","https://openalex.org/I165779595","https://openalex.org/I42894916","https://openalex.org/I56590836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052143564","display_name":"Elizabeth D. Williams","orcid":"https://orcid.org/0000-0002-3364-6655"},"institutions":[{"id":"https://openalex.org/I42894916","display_name":"Data61","ror":"https://ror.org/03q397159","country_code":"AU","type":"other","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I42894916","https://openalex.org/I4387156119"]},{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]},{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]},{"id":"https://openalex.org/I60733029","display_name":"Monash Institute of Medical Research","ror":"https://ror.org/05p96ba03","country_code":"AU","type":"healthcare","lineage":["https://openalex.org/I60733029"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Elizabeth D. Williams","raw_affiliation_strings":["1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia","NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia"],"affiliations":[{"raw_affiliation_string":"1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia","institution_ids":["https://openalex.org/I60733029","https://openalex.org/I165779595","https://openalex.org/I42894916","https://openalex.org/I56590836"]},{"raw_affiliation_string":"NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia","institution_ids":["https://openalex.org/I60733029","https://openalex.org/I165779595","https://openalex.org/I42894916","https://openalex.org/I56590836"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5020223445","display_name":"Bryan Beresford\u2010Smith","orcid":null},"institutions":[{"id":"https://openalex.org/I60733029","display_name":"Monash Institute of Medical Research","ror":"https://ror.org/05p96ba03","country_code":"AU","type":"healthcare","lineage":["https://openalex.org/I60733029"]},{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]},{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]},{"id":"https://openalex.org/I42894916","display_name":"Data61","ror":"https://ror.org/03q397159","country_code":"AU","type":"other","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I42894916","https://openalex.org/I4387156119"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Bryan Beresford-Smith","raw_affiliation_strings":["1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia","NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia"],"affiliations":[{"raw_affiliation_string":"1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia","institution_ids":["https://openalex.org/I60733029","https://openalex.org/I165779595","https://openalex.org/I42894916","https://openalex.org/I56590836"]},{"raw_affiliation_string":"NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia","institution_ids":["https://openalex.org/I60733029","https://openalex.org/I165779595","https://openalex.org/I42894916","https://openalex.org/I56590836"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5018655162"],"corresponding_institution_ids":["https://openalex.org/I165779595","https://openalex.org/I42894916","https://openalex.org/I56590836","https://openalex.org/I60733029"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.0,"has_fulltext":true,"cited_by_count":19,"citation_normalized_percentile":{"value":0.11406588,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"28","issue":"12","first_page":"i172","last_page":"i178"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9853000044822693,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9850999712944031,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5939271450042725},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.584518313407898},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5827252864837646},{"id":"https://openalex.org/keywords/shotgun","display_name":"Shotgun","score":0.5345999598503113},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.38493046164512634},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.23896166682243347},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.13753777742385864},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09897246956825256}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5939271450042725},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.584518313407898},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5827252864837646},{"id":"https://openalex.org/C2781434637","wikidata":"https://www.wikidata.org/wiki/Q486396","display_name":"Shotgun","level":3,"score":0.5345999598503113},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.38493046164512634},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23896166682243347},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.13753777742385864},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09897246956825256}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014183","descriptor_name":"Transplantation, Heterologous","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D014183","descriptor_name":"Transplantation, Heterologous","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D014183","descriptor_name":"Transplantation, Heterologous","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D018076","descriptor_name":"DNA, Complementary","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018076","descriptor_name":"DNA, Complementary","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018076","descriptor_name":"DNA, Complementary","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1093/bioinformatics/bts236","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts236","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/12/i172/48875568/bioinformatics_28_12_i172.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22689758","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22689758","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:eprints.qut.edu.au:77759","is_oa":true,"landing_page_url":null,"pdf_url":"https://eprints.qut.edu.au/77759/1/Conway%2C_Bioinformatics_2012.pdf","source":{"id":"https://openalex.org/S4306402607","display_name":"QUT ePrints (Queensland University of Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I160993911","host_organization_name":"Queensland University of Technology","host_organization_lineage":["https://openalex.org/I160993911"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Contribution to Journal"},{"id":"pmh:oai:jupiter.its.unimelb.edu.au:11343/264181","is_oa":true,"landing_page_url":"http://hdl.handle.net/11343/264181","pdf_url":"http://hdl.handle.net/11343/264181","source":{"id":"https://openalex.org/S4377196259","display_name":"Minerva Access (University of Melbourne)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I165779595","host_organization_name":"The University of Melbourne","host_organization_lineage":["https://openalex.org/I165779595"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:oai:europepmc.org:2378088","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3371868","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"mag:2108976255","is_oa":false,"landing_page_url":"https://eprints.qut.edu.au/77759/","pdf_url":null,"source":{"id":"https://openalex.org/S4306510308","display_name":"Faculty of Health; Institute of Health and Biomedical Innovation","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":"Faculty of Health; Institute of Health and Biomedical Innovation","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bts236","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts236","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/12/i172/48875568/bioinformatics_28_12_i172.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G7689438616","display_name":null,"funder_award_id":"519539","funder_id":"https://openalex.org/F4320334705","funder_display_name":"National Health and Medical Research Council"}],"funders":[{"id":"https://openalex.org/F4320306163","display_name":"Prostate Cancer Foundation","ror":"https://ror.org/01npwtv09"},{"id":"https://openalex.org/F4320310369","display_name":"National ICT Australia","ror":"https://ror.org/03q397159"},{"id":"https://openalex.org/F4320315885","display_name":"Australian Government","ror":"https://ror.org/0314h5y94"},{"id":"https://openalex.org/F4320320370","display_name":"Prostate Cancer Foundation of Australia","ror":"https://ror.org/02kna3n95"},{"id":"https://openalex.org/F4320322858","display_name":"State Government of Victoria","ror":"https://ror.org/02xvc5r05"},{"id":"https://openalex.org/F4320334705","display_name":"National Health and Medical Research Council","ror":"https://ror.org/011kf5r70"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2108976255.pdf","grobid_xml":"https://content.openalex.org/works/W2108976255.grobid-xml"},"referenced_works_count":17,"referenced_works":["https://openalex.org/W2007550813","https://openalex.org/W2063007091","https://openalex.org/W2077300005","https://openalex.org/W2097065948","https://openalex.org/W2098832713","https://openalex.org/W2111601859","https://openalex.org/W2133531097","https://openalex.org/W2141458291","https://openalex.org/W2147354890","https://openalex.org/W2154503441","https://openalex.org/W2159640103","https://openalex.org/W2161546116","https://openalex.org/W2162454456","https://openalex.org/W2907919037","https://openalex.org/W2912601938","https://openalex.org/W6641128955","https://openalex.org/W6842402754"],"related_works":["https://openalex.org/W2121964616","https://openalex.org/W2798293223","https://openalex.org/W1631109438","https://openalex.org/W3083416430","https://openalex.org/W2984855079","https://openalex.org/W2104052851","https://openalex.org/W2055335889","https://openalex.org/W3193743240","https://openalex.org/W1562006861","https://openalex.org/W2532808087","https://openalex.org/W2949395034","https://openalex.org/W3044958744","https://openalex.org/W2756085100","https://openalex.org/W2150635649","https://openalex.org/W2061537056","https://openalex.org/W2893222042","https://openalex.org/W2323326409","https://openalex.org/W3018603462","https://openalex.org/W2112876600","https://openalex.org/W2136170412"],"abstract_inverted_index":{"Xenome":[0],"is":[1],"available":[2],"for":[3],"non-commercial":[4],"use":[5],"from":[6],"http://www.nicta.com.au/bioinformatics.":[7]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":3},{"year":2018,"cited_by_count":2}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
