{"id":"https://openalex.org/W2103076022","doi":"https://doi.org/10.1093/bioinformatics/bts215","title":"Extending ontologies by finding siblings using set expansion techniques","display_name":"Extending ontologies by finding siblings using set expansion techniques","publication_year":2012,"publication_date":"2012-06-09","ids":{"openalex":"https://openalex.org/W2103076022","doi":"https://doi.org/10.1093/bioinformatics/bts215","mag":"2103076022","pmid":"https://pubmed.ncbi.nlm.nih.gov/22689774"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bts215","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts215","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/12/i292/16906665/bts215.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/28/12/i292/16906665/bts215.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5059649552","display_name":"G\u00f6tz Fabian","orcid":null},"institutions":[{"id":"https://openalex.org/I78650965","display_name":"TU Dresden","ror":"https://ror.org/042aqky30","country_code":"DE","type":"education","lineage":["https://openalex.org/I78650965"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"G\u00f6tz Fabian","raw_affiliation_strings":["Biotechnology Center (BIOTEC), Technische Universit\u00e4t Dresden, 01062 Dresden, Germany"],"affiliations":[{"raw_affiliation_string":"Biotechnology Center (BIOTEC), Technische Universit\u00e4t Dresden, 01062 Dresden, Germany","institution_ids":["https://openalex.org/I78650965"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083599531","display_name":"Thomas W\u00e4chter","orcid":null},"institutions":[{"id":"https://openalex.org/I78650965","display_name":"TU Dresden","ror":"https://ror.org/042aqky30","country_code":"DE","type":"education","lineage":["https://openalex.org/I78650965"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Thomas W\u00e4chter","raw_affiliation_strings":["Biotechnology Center (BIOTEC), Technische Universit\u00e4t Dresden, 01062 Dresden, Germany"],"affiliations":[{"raw_affiliation_string":"Biotechnology Center (BIOTEC), Technische Universit\u00e4t Dresden, 01062 Dresden, Germany","institution_ids":["https://openalex.org/I78650965"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016411406","display_name":"Michael Schroeder","orcid":"https://orcid.org/0000-0003-2848-6949"},"institutions":[{"id":"https://openalex.org/I78650965","display_name":"TU Dresden","ror":"https://ror.org/042aqky30","country_code":"DE","type":"education","lineage":["https://openalex.org/I78650965"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Michael Schroeder","raw_affiliation_strings":["Biotechnology Center (BIOTEC), Technische Universit\u00e4t Dresden, 01062 Dresden, Germany"],"affiliations":[{"raw_affiliation_string":"Biotechnology Center (BIOTEC), Technische Universit\u00e4t Dresden, 01062 Dresden, Germany","institution_ids":["https://openalex.org/I78650965"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5059649552"],"corresponding_institution_ids":["https://openalex.org/I78650965"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.5253,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.65396416,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"28","issue":"12","first_page":"i292","last_page":"i300"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9940999746322632,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7930634021759033},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.7584140300750732},{"id":"https://openalex.org/keywords/open-biomedical-ontologies","display_name":"Open Biomedical Ontologies","score":0.6283089518547058},{"id":"https://openalex.org/keywords/plug-in","display_name":"Plug-in","score":0.6102012395858765},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5622168779373169},{"id":"https://openalex.org/keywords/upper-ontology","display_name":"Upper ontology","score":0.5264708995819092},{"id":"https://openalex.org/keywords/ontology-alignment","display_name":"Ontology alignment","score":0.49645596742630005},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4486076831817627},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.44307252764701843},{"id":"https://openalex.org/keywords/ontology-components","display_name":"Ontology components","score":0.44047844409942627},{"id":"https://openalex.org/keywords/idef5","display_name":"IDEF5","score":0.42566025257110596},{"id":"https://openalex.org/keywords/class","display_name":"Class (philosophy)","score":0.41096287965774536},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.34991922974586487},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.3065057694911957},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.1905512809753418},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.08644264936447144}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7930634021759033},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.7584140300750732},{"id":"https://openalex.org/C137982476","wikidata":"https://www.wikidata.org/wiki/Q7072326","display_name":"Open Biomedical Ontologies","level":5,"score":0.6283089518547058},{"id":"https://openalex.org/C4924752","wikidata":"https://www.wikidata.org/wiki/Q184148","display_name":"Plug-in","level":2,"score":0.6102012395858765},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5622168779373169},{"id":"https://openalex.org/C78726541","wikidata":"https://www.wikidata.org/wiki/Q3882785","display_name":"Upper ontology","level":3,"score":0.5264708995819092},{"id":"https://openalex.org/C98893333","wikidata":"https://www.wikidata.org/wiki/Q4339878","display_name":"Ontology alignment","level":4,"score":0.49645596742630005},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4486076831817627},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.44307252764701843},{"id":"https://openalex.org/C154210476","wikidata":"https://www.wikidata.org/wiki/Q7095057","display_name":"Ontology components","level":5,"score":0.44047844409942627},{"id":"https://openalex.org/C118248724","wikidata":"https://www.wikidata.org/wiki/Q5969997","display_name":"IDEF5","level":4,"score":0.42566025257110596},{"id":"https://openalex.org/C2777212361","wikidata":"https://www.wikidata.org/wiki/Q5127848","display_name":"Class (philosophy)","level":2,"score":0.41096287965774536},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.34991922974586487},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.3065057694911957},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.1905512809753418},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.08644264936447144},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/bts215","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts215","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/12/i292/16906665/bts215.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22689774","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22689774","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:2378067","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3371847","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bts215","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts215","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/12/i292/16906665/bts215.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","score":0.49000000953674316,"display_name":"Quality Education"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2103076022.pdf","grobid_xml":"https://content.openalex.org/works/W2103076022.grobid-xml"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W97622340","https://openalex.org/W1483118642","https://openalex.org/W1485179616","https://openalex.org/W1958239248","https://openalex.org/W1998671175","https://openalex.org/W1999773781","https://openalex.org/W2013109830","https://openalex.org/W2018737226","https://openalex.org/W2022270910","https://openalex.org/W2037625543","https://openalex.org/W2041428546","https://openalex.org/W2049107599","https://openalex.org/W2068737686","https://openalex.org/W2091940856","https://openalex.org/W2096704019","https://openalex.org/W2103017472","https://openalex.org/W2103296194","https://openalex.org/W2117510361","https://openalex.org/W2123152121","https://openalex.org/W2124602574","https://openalex.org/W2132784310","https://openalex.org/W2140599435","https://openalex.org/W2144303444","https://openalex.org/W2145328028","https://openalex.org/W2148540243","https://openalex.org/W2159583324","https://openalex.org/W2162279065","https://openalex.org/W2395921823","https://openalex.org/W2478643098","https://openalex.org/W2600716915","https://openalex.org/W2607303097","https://openalex.org/W2792932412","https://openalex.org/W2968573267","https://openalex.org/W3142746689","https://openalex.org/W6602917193","https://openalex.org/W6603979058","https://openalex.org/W6641214351","https://openalex.org/W6660511571","https://openalex.org/W6675643237","https://openalex.org/W6681354002","https://openalex.org/W6683737171"],"related_works":["https://openalex.org/W991275336","https://openalex.org/W1506177826","https://openalex.org/W2125569773","https://openalex.org/W4206428734","https://openalex.org/W2726617685","https://openalex.org/W2732632690","https://openalex.org/W2102229151","https://openalex.org/W1794266373","https://openalex.org/W2012420033","https://openalex.org/W164246185"],"abstract_inverted_index":{"Sibling":[0],"discovery":[1],"for":[2,11],"ontology":[3],"is":[4],"available":[5],"as":[6],"part":[7],"of":[8],"DOG4DAG":[9],"(www.biotec.tu-dresden.de/research/schroeder/dog4dag)":[10],"both":[12],"Prot\u00e9g\u00e9":[13],"4.1":[14],"and":[15],"OBO-Edit":[16],"2.1.":[17]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2019,"cited_by_count":2},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":3}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
