{"id":"https://openalex.org/W2156216305","doi":"https://doi.org/10.1093/bioinformatics/bts109","title":"Mirroring co-evolving trees in the light of their topologies","display_name":"Mirroring co-evolving trees in the light of their topologies","publication_year":2012,"publication_date":"2012-03-06","ids":{"openalex":"https://openalex.org/W2156216305","doi":"https://doi.org/10.1093/bioinformatics/bts109","mag":"2156216305","pmid":"https://pubmed.ncbi.nlm.nih.gov/22399677"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bts109","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts109","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/9/1202/48880312/bioinformatics_28_9_1202.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/28/9/1202/48880312/bioinformatics_28_9_1202.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5068064308","display_name":"Iman Hajirasouliha","orcid":"https://orcid.org/0000-0002-0600-3371"},"institutions":[{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]},{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"education","lineage":["https://openalex.org/I18014758"]},{"id":"https://openalex.org/I1341640284","display_name":"Centrum Wiskunde & Informatica","ror":"https://ror.org/00x7ekv49","country_code":"NL","type":"facility","lineage":["https://openalex.org/I1341640284","https://openalex.org/I2800991832"]}],"countries":["CA","ES","NL"],"is_corresponding":false,"raw_author_name":"Iman Hajirasouliha","raw_affiliation_strings":["1 School of Computing Science, Simon Fraser University, Burnaby, BC, V5A 1S6, Canada, 2Centrum Wiskunde & Informatica (CWI), Science Park 123 1098 XG, Amsterdam, The Netherlands and 3Structural Biology and Biocomputing Programme (CNIO) Spanish National Cancer Research Centre, 28029 Madrid, Spain"],"affiliations":[{"raw_affiliation_string":"1 School of Computing Science, Simon Fraser University, Burnaby, BC, V5A 1S6, Canada, 2Centrum Wiskunde & Informatica (CWI), Science Park 123 1098 XG, Amsterdam, The Netherlands and 3Structural Biology and Biocomputing Programme (CNIO) Spanish National Cancer Research Centre, 28029 Madrid, Spain","institution_ids":["https://openalex.org/I18014758","https://openalex.org/I4210089594","https://openalex.org/I1341640284"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001148638","display_name":"Alexander Sch\u00f6nhuth","orcid":"https://orcid.org/0000-0003-3529-0856"},"institutions":[{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"education","lineage":["https://openalex.org/I18014758"]},{"id":"https://openalex.org/I1341640284","display_name":"Centrum Wiskunde & Informatica","ror":"https://ror.org/00x7ekv49","country_code":"NL","type":"facility","lineage":["https://openalex.org/I1341640284","https://openalex.org/I2800991832"]},{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]}],"countries":["CA","ES","NL"],"is_corresponding":false,"raw_author_name":"Alexander Sch\u00f6nhuth","raw_affiliation_strings":["1 School of Computing Science, Simon Fraser University, Burnaby, BC, V5A 1S6, Canada, 2Centrum Wiskunde & Informatica (CWI), Science Park 123 1098 XG, Amsterdam, The Netherlands and 3Structural Biology and Biocomputing Programme (CNIO) Spanish National Cancer Research Centre, 28029 Madrid, Spain"],"affiliations":[{"raw_affiliation_string":"1 School of Computing Science, Simon Fraser University, Burnaby, BC, V5A 1S6, Canada, 2Centrum Wiskunde & Informatica (CWI), Science Park 123 1098 XG, Amsterdam, The Netherlands and 3Structural Biology and Biocomputing Programme (CNIO) Spanish National Cancer Research Centre, 28029 Madrid, Spain","institution_ids":["https://openalex.org/I18014758","https://openalex.org/I4210089594","https://openalex.org/I1341640284"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065184997","display_name":"David Juan","orcid":"https://orcid.org/0000-0003-1912-9667"},"institutions":[{"id":"https://openalex.org/I1341640284","display_name":"Centrum Wiskunde & Informatica","ror":"https://ror.org/00x7ekv49","country_code":"NL","type":"facility","lineage":["https://openalex.org/I1341640284","https://openalex.org/I2800991832"]},{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]},{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"education","lineage":["https://openalex.org/I18014758"]}],"countries":["CA","ES","NL"],"is_corresponding":false,"raw_author_name":"David de Juan","raw_affiliation_strings":["1 School of Computing Science, Simon Fraser University, Burnaby, BC, V5A 1S6, Canada, 2Centrum Wiskunde & Informatica (CWI), Science Park 123 1098 XG, Amsterdam, The Netherlands and 3Structural Biology and Biocomputing Programme (CNIO) Spanish National Cancer Research Centre, 28029 Madrid, Spain"],"affiliations":[{"raw_affiliation_string":"1 School of Computing Science, Simon Fraser University, Burnaby, BC, V5A 1S6, Canada, 2Centrum Wiskunde & Informatica (CWI), Science Park 123 1098 XG, Amsterdam, The Netherlands and 3Structural Biology and Biocomputing Programme (CNIO) Spanish National Cancer Research Centre, 28029 Madrid, Spain","institution_ids":["https://openalex.org/I18014758","https://openalex.org/I4210089594","https://openalex.org/I1341640284"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015217651","display_name":"Alfonso Valencia","orcid":"https://orcid.org/0000-0002-8937-6789"},"institutions":[{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]},{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"education","lineage":["https://openalex.org/I18014758"]},{"id":"https://openalex.org/I1341640284","display_name":"Centrum Wiskunde & Informatica","ror":"https://ror.org/00x7ekv49","country_code":"NL","type":"facility","lineage":["https://openalex.org/I1341640284","https://openalex.org/I2800991832"]}],"countries":["CA","ES","NL"],"is_corresponding":false,"raw_author_name":"Alfonso Valencia","raw_affiliation_strings":["1 School of Computing Science, Simon Fraser University, Burnaby, BC, V5A 1S6, Canada, 2Centrum Wiskunde & Informatica (CWI), Science Park 123 1098 XG, Amsterdam, The Netherlands and 3Structural Biology and Biocomputing Programme (CNIO) Spanish National Cancer Research Centre, 28029 Madrid, Spain"],"affiliations":[{"raw_affiliation_string":"1 School of Computing Science, Simon Fraser University, Burnaby, BC, V5A 1S6, Canada, 2Centrum Wiskunde & Informatica (CWI), Science Park 123 1098 XG, Amsterdam, The Netherlands and 3Structural Biology and Biocomputing Programme (CNIO) Spanish National Cancer Research Centre, 28029 Madrid, Spain","institution_ids":["https://openalex.org/I18014758","https://openalex.org/I4210089594","https://openalex.org/I1341640284"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5102972238","display_name":"S. Cenk \u015eahinalp","orcid":"https://orcid.org/0000-0002-2170-2808"},"institutions":[{"id":"https://openalex.org/I1341640284","display_name":"Centrum Wiskunde & Informatica","ror":"https://ror.org/00x7ekv49","country_code":"NL","type":"facility","lineage":["https://openalex.org/I1341640284","https://openalex.org/I2800991832"]},{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]},{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"education","lineage":["https://openalex.org/I18014758"]}],"countries":["CA","ES","NL"],"is_corresponding":true,"raw_author_name":"S. Cenk Sahinalp","raw_affiliation_strings":["1 School of Computing Science, Simon Fraser University, Burnaby, BC, V5A 1S6, Canada, 2Centrum Wiskunde & Informatica (CWI), Science Park 123 1098 XG, Amsterdam, The Netherlands and 3Structural Biology and Biocomputing Programme (CNIO) Spanish National Cancer Research Centre, 28029 Madrid, Spain"],"affiliations":[{"raw_affiliation_string":"1 School of Computing Science, Simon Fraser University, Burnaby, BC, V5A 1S6, Canada, 2Centrum Wiskunde & Informatica (CWI), Science Park 123 1098 XG, Amsterdam, The Netherlands and 3Structural Biology and Biocomputing Programme (CNIO) Spanish National Cancer Research Centre, 28029 Madrid, Spain","institution_ids":["https://openalex.org/I18014758","https://openalex.org/I4210089594","https://openalex.org/I1341640284"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5102972238"],"corresponding_institution_ids":["https://openalex.org/I1341640284","https://openalex.org/I18014758","https://openalex.org/I4210089594"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.394,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.62460009,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"28","issue":"9","first_page":"1202","last_page":"1208"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9830999970436096,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/network-topology","display_name":"Network topology","score":0.6940080523490906},{"id":"https://openalex.org/keywords/heuristics","display_name":"Heuristics","score":0.6860593557357788},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.6392160654067993},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6025331020355225},{"id":"https://openalex.org/keywords/mirroring","display_name":"Mirroring","score":0.5775691270828247},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5430256128311157},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.5410069823265076},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.5227925181388855},{"id":"https://openalex.org/keywords/maximization","display_name":"Maximization","score":0.5227639675140381},{"id":"https://openalex.org/keywords/distance-matrix","display_name":"Distance matrix","score":0.4520523250102997},{"id":"https://openalex.org/keywords/enhanced-data-rates-for-gsm-evolution","display_name":"Enhanced Data Rates for GSM Evolution","score":0.4303682744503021},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.39655211567878723},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.34754273295402527},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.32297375798225403},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.2973521947860718},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2619505226612091},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.22394385933876038},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11410832405090332}],"concepts":[{"id":"https://openalex.org/C199845137","wikidata":"https://www.wikidata.org/wiki/Q145490","display_name":"Network topology","level":2,"score":0.6940080523490906},{"id":"https://openalex.org/C127705205","wikidata":"https://www.wikidata.org/wiki/Q5748245","display_name":"Heuristics","level":2,"score":0.6860593557357788},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.6392160654067993},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6025331020355225},{"id":"https://openalex.org/C189645446","wikidata":"https://www.wikidata.org/wiki/Q350865","display_name":"Mirroring","level":2,"score":0.5775691270828247},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5430256128311157},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.5410069823265076},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.5227925181388855},{"id":"https://openalex.org/C2776330181","wikidata":"https://www.wikidata.org/wiki/Q18358244","display_name":"Maximization","level":2,"score":0.5227639675140381},{"id":"https://openalex.org/C111208986","wikidata":"https://www.wikidata.org/wiki/Q901698","display_name":"Distance matrix","level":2,"score":0.4520523250102997},{"id":"https://openalex.org/C162307627","wikidata":"https://www.wikidata.org/wiki/Q204833","display_name":"Enhanced Data Rates for GSM Evolution","level":2,"score":0.4303682744503021},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.39655211567878723},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.34754273295402527},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.32297375798225403},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.2973521947860718},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2619505226612091},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.22394385933876038},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11410832405090332},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C46312422","wikidata":"https://www.wikidata.org/wiki/Q11024","display_name":"Communication","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/bts109","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts109","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/9/1202/48880312/bioinformatics_28_9_1202.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22399677","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22399677","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bts109","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts109","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/9/1202/48880312/bioinformatics_28_9_1202.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2156216305.pdf","grobid_xml":"https://content.openalex.org/works/W2156216305.grobid-xml"},"referenced_works_count":22,"referenced_works":["https://openalex.org/W1975009259","https://openalex.org/W2004805762","https://openalex.org/W2011975945","https://openalex.org/W2043654227","https://openalex.org/W2044421248","https://openalex.org/W2046039468","https://openalex.org/W2056708848","https://openalex.org/W2057294899","https://openalex.org/W2057885377","https://openalex.org/W2067592402","https://openalex.org/W2091828646","https://openalex.org/W2093176106","https://openalex.org/W2097928187","https://openalex.org/W2106882534","https://openalex.org/W2111582408","https://openalex.org/W2132022258","https://openalex.org/W2147693153","https://openalex.org/W2149493934","https://openalex.org/W2152568394","https://openalex.org/W2165610487","https://openalex.org/W4252706339","https://openalex.org/W6661926884"],"related_works":["https://openalex.org/W2081134829","https://openalex.org/W2012196799","https://openalex.org/W2914953798","https://openalex.org/W2016936103","https://openalex.org/W1969752774","https://openalex.org/W2551163313","https://openalex.org/W2294049764","https://openalex.org/W2108584188","https://openalex.org/W1980969160","https://openalex.org/W2404041551"],"abstract_inverted_index":{"A":[0],"C":[1],"implementation":[2],"of":[3],"the":[4],"method":[5],"demonstrated":[6],"in":[7],"this":[8],"article":[9],"is":[10],"available":[11],"at":[12],"http://compbio.cs.sfu.ca/mirrort.htm":[13]},"counts_by_year":[{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
