{"id":"https://openalex.org/W2109732625","doi":"https://doi.org/10.1093/bioinformatics/btr664","title":"DMAN: a Java tool for analysis of multi-well differential scanning fluorimetry experiments","display_name":"DMAN: a Java tool for analysis of multi-well differential scanning fluorimetry experiments","publication_year":2011,"publication_date":"2011-11-30","ids":{"openalex":"https://openalex.org/W2109732625","doi":"https://doi.org/10.1093/bioinformatics/btr664","mag":"2109732625","pmid":"https://pubmed.ncbi.nlm.nih.gov/22135419"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btr664","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr664","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/3/439/48879070/bioinformatics_28_3_439.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/28/3/439/48879070/bioinformatics_28_3_439.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063128380","display_name":"Conan K. Wang","orcid":"https://orcid.org/0000-0002-7973-7632"},"institutions":[{"id":"https://openalex.org/I11701301","display_name":"Griffith University","ror":"https://ror.org/02sc3r913","country_code":"AU","type":"education","lineage":["https://openalex.org/I11701301"]},{"id":"https://openalex.org/I165779595","display_name":"The University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Conan K. Wang","raw_affiliation_strings":["1 Structural Chemistry Program, Eskitis Institute for Cell and Molecular Therapies, Griffith University, Brisbane, Queensland 4111, 2Faculty of Veterinary Science, The University of Melbourne, Werribee, Victoria 3052 and 3Queensland Tropical Health Alliance"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Structural Chemistry Program, Eskitis Institute for Cell and Molecular Therapies, Griffith University, Brisbane, Queensland 4111, 2Faculty of Veterinary Science, The University of Melbourne, Werribee, Victoria 3052 and 3Queensland Tropical Health Alliance","institution_ids":["https://openalex.org/I165779595","https://openalex.org/I11701301"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078793972","display_name":"Saroja Weeratunga","orcid":"https://orcid.org/0000-0002-4756-911X"},"institutions":[{"id":"https://openalex.org/I11701301","display_name":"Griffith University","ror":"https://ror.org/02sc3r913","country_code":"AU","type":"education","lineage":["https://openalex.org/I11701301"]},{"id":"https://openalex.org/I165779595","display_name":"The University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Saroja K. Weeratunga","raw_affiliation_strings":["1 Structural Chemistry Program, Eskitis Institute for Cell and Molecular Therapies, Griffith University, Brisbane, Queensland 4111, 2Faculty of Veterinary Science, The University of Melbourne, Werribee, Victoria 3052 and 3Queensland Tropical Health Alliance"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Structural Chemistry Program, Eskitis Institute for Cell and Molecular Therapies, Griffith University, Brisbane, Queensland 4111, 2Faculty of Veterinary Science, The University of Melbourne, Werribee, Victoria 3052 and 3Queensland Tropical Health Alliance","institution_ids":["https://openalex.org/I165779595","https://openalex.org/I11701301"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023940086","display_name":"Chris M. Pacheco","orcid":"https://orcid.org/0000-0002-2980-3048"},"institutions":[{"id":"https://openalex.org/I11701301","display_name":"Griffith University","ror":"https://ror.org/02sc3r913","country_code":"AU","type":"education","lineage":["https://openalex.org/I11701301"]},{"id":"https://openalex.org/I165779595","display_name":"The University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Chris M. Pacheco","raw_affiliation_strings":["1 Structural Chemistry Program, Eskitis Institute for Cell and Molecular Therapies, Griffith University, Brisbane, Queensland 4111, 2Faculty of Veterinary Science, The University of Melbourne, Werribee, Victoria 3052 and 3Queensland Tropical Health Alliance"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Structural Chemistry Program, Eskitis Institute for Cell and Molecular Therapies, Griffith University, Brisbane, Queensland 4111, 2Faculty of Veterinary Science, The University of Melbourne, Werribee, Victoria 3052 and 3Queensland Tropical Health Alliance","institution_ids":["https://openalex.org/I165779595","https://openalex.org/I11701301"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025007734","display_name":"Andreas Hofmann","orcid":"https://orcid.org/0000-0003-4408-5467"},"institutions":[{"id":"https://openalex.org/I11701301","display_name":"Griffith University","ror":"https://ror.org/02sc3r913","country_code":"AU","type":"education","lineage":["https://openalex.org/I11701301"]},{"id":"https://openalex.org/I165779595","display_name":"The University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Andreas Hofmann","raw_affiliation_strings":["1 Structural Chemistry Program, Eskitis Institute for Cell and Molecular Therapies, Griffith University, Brisbane, Queensland 4111, 2Faculty of Veterinary Science, The University of Melbourne, Werribee, Victoria 3052 and 3Queensland Tropical Health Alliance"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Structural Chemistry Program, Eskitis Institute for Cell and Molecular Therapies, Griffith University, Brisbane, Queensland 4111, 2Faculty of Veterinary Science, The University of Melbourne, Werribee, Victoria 3052 and 3Queensland Tropical Health Alliance","institution_ids":["https://openalex.org/I165779595","https://openalex.org/I11701301"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5025007734","https://openalex.org/A5063128380"],"corresponding_institution_ids":["https://openalex.org/I11701301","https://openalex.org/I165779595"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.7984,"has_fulltext":true,"cited_by_count":45,"citation_normalized_percentile":{"value":0.71804452,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"28","issue":"3","first_page":"439","last_page":"440"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.26809999346733093,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.26809999346733093,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.14650000631809235,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13526","display_name":"14-3-3 protein interactions","score":0.1062999963760376,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/java","display_name":"Java","score":0.7151746153831482},{"id":"https://openalex.org/keywords/modular-design","display_name":"Modular design","score":0.6725720167160034},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.6172720193862915},{"id":"https://openalex.org/keywords/graphical-user-interface","display_name":"Graphical user interface","score":0.5781853795051575},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5276530981063843},{"id":"https://openalex.org/keywords/profiling","display_name":"Profiling (computer programming)","score":0.4195529520511627},{"id":"https://openalex.org/keywords/download","display_name":"Download","score":0.41704773902893066},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.33028537034988403},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.3223038911819458}],"concepts":[{"id":"https://openalex.org/C548217200","wikidata":"https://www.wikidata.org/wiki/Q251","display_name":"Java","level":2,"score":0.7151746153831482},{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.6725720167160034},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.6172720193862915},{"id":"https://openalex.org/C37789001","wikidata":"https://www.wikidata.org/wiki/Q782543","display_name":"Graphical user interface","level":2,"score":0.5781853795051575},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5276530981063843},{"id":"https://openalex.org/C187191949","wikidata":"https://www.wikidata.org/wiki/Q1138496","display_name":"Profiling (computer programming)","level":2,"score":0.4195529520511627},{"id":"https://openalex.org/C2780154274","wikidata":"https://www.wikidata.org/wiki/Q7126717","display_name":"Download","level":2,"score":0.41704773902893066},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.33028537034988403},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.3223038911819458}],"mesh":[{"descriptor_ui":"D005470","descriptor_name":"Fluorometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D005470","descriptor_name":"Fluorometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D005470","descriptor_name":"Fluorometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060888","descriptor_name":"Real-Time Polymerase Chain Reaction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060888","descriptor_name":"Real-Time Polymerase Chain Reaction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060888","descriptor_name":"Real-Time Polymerase Chain Reaction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btr664","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr664","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/3/439/48879070/bioinformatics_28_3_439.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22135419","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22135419","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:research-repository.griffith.edu.au:10072/46872","is_oa":true,"landing_page_url":"http://hdl.handle.net/10072/46872","pdf_url":"http://hdl.handle.net/10072/46872","source":{"id":"https://openalex.org/S4306402548","display_name":"Griffith Research Online (Griffith University, Queensland, Australia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I11701301","host_organization_name":"Griffith University","host_organization_lineage":["https://openalex.org/I11701301"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal article"},{"id":"pmh:oai:espace.library.uq.edu.au:UQ:418455","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306402388","display_name":"Queensland's institutional digital repository (The University of Queensland)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I165143802","host_organization_name":"The University of Queensland","host_organization_lineage":["https://openalex.org/I165143802"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btr664","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr664","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/3/439/48879070/bioinformatics_28_3_439.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9","score":0.47999998927116394}],"awards":[],"funders":[{"id":"https://openalex.org/F4320334705","display_name":"National Health and Medical Research Council","ror":"https://ror.org/011kf5r70"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W2109732625.pdf"},"referenced_works_count":8,"referenced_works":["https://openalex.org/W2000106654","https://openalex.org/W2039377812","https://openalex.org/W2047132220","https://openalex.org/W2062989416","https://openalex.org/W2079029484","https://openalex.org/W2100641899","https://openalex.org/W2158750984","https://openalex.org/W2792718482"],"related_works":["https://openalex.org/W1502256359","https://openalex.org/W1538236101","https://openalex.org/W1571558219","https://openalex.org/W1558040955","https://openalex.org/W185412380","https://openalex.org/W2383710934","https://openalex.org/W2348361596","https://openalex.org/W2168198346","https://openalex.org/W2528467228","https://openalex.org/W1987434946"],"abstract_inverted_index":{"SUMMARY:":[0],"Differential":[1],"scanning":[2],"fluorimetry":[3],"(DSF)":[4],"is":[5,37,112,122],"a":[6,24,43,118],"rapid":[7],"technique":[8],"that":[9],"can":[10,49,58,146],"be":[11,50,59,135,148],"used":[12],"in":[13,33,86,105,114],"structural":[14],"biology":[15],"to":[16,27,39,66,84,116,125],"study":[17],"protein-ligand":[18],"interactions.":[19],"We":[20],"have":[21],"developed":[22],"DMAN,":[23,132],"novel":[25],"tool":[26],"analyse":[28],"multi-well":[29,101],"plate":[30,47,69,102],"data":[31,57,87],"obtained":[32],"DSF":[34],"experiments.":[35],"DMAN":[36,64,111],"easy":[38,97],"install":[40],"and":[41,55,61,78,141],"provides":[42],"user-friendly":[44],"interface.":[45],"Multi-well":[46],"layouts":[48],"designed":[51],"by":[52,63],"the":[53,67,106],"user":[54],"experimental":[56],"annotated":[60],"analysed":[62],"according":[65],"specified":[68],"layout.":[70],"Statistical":[71],"tests":[72],"for":[73,137],"significance":[74],"are":[75,81],"performed":[76],"automatically,":[77],"graphical":[79],"tools":[80],"also":[82,147],"provided":[83],"assist":[85],"analysis.":[88],"The":[89],"modular":[90],"concept":[91],"of":[92,99],"this":[93,151],"software":[94],"will":[95,134],"allow":[96],"development":[98],"other":[100],"analysis":[103],"applications":[104],"future.":[107],"AVAILABILITY":[108],"AND":[109],"IMPLEMENTATION:":[110],"implemented":[113],"Java":[115],"provide":[117],"cross-platform":[119],"compatibility.":[120],"It":[121],"freely":[123],"available":[124],"academic":[126],"users":[127,133],"at":[128],"http://www.structuralchemistry.org/pcsb/.":[129],"To":[130],"download":[131],"asked":[136],"their":[138],"name,":[139],"institution":[140],"email":[142],"address.":[143],"A":[144],"manual":[145],"downloaded":[149],"from":[150],"site.":[152],"CONTACT:":[153],"conan.wang@griffith.edu.au;":[154],"a.hofmann@griffith.edu.au.":[155]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":10},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":6},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":3},{"year":2012,"cited_by_count":3}],"updated_date":"2026-06-16T07:32:37.131356","created_date":"2025-10-10T00:00:00"}
