{"id":"https://openalex.org/W2120661538","doi":"https://doi.org/10.1093/bioinformatics/btr662","title":"An infrastructure for ontology-based information systems in biomedicine: RICORDO case study","display_name":"An infrastructure for ontology-based information systems in biomedicine: RICORDO case study","publication_year":2011,"publication_date":"2011-11-29","ids":{"openalex":"https://openalex.org/W2120661538","doi":"https://doi.org/10.1093/bioinformatics/btr662","mag":"2120661538","pmid":"https://pubmed.ncbi.nlm.nih.gov/22130590"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btr662","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr662","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5034436640","display_name":"Sarala Wimalaratne","orcid":"https://orcid.org/0000-0002-5355-2576"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I154130895","display_name":"University of Auckland","ror":"https://ror.org/03b94tp07","country_code":"NZ","type":"education","lineage":["https://openalex.org/I154130895"]},{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]}],"countries":["GB","NZ"],"is_corresponding":true,"raw_author_name":"Sarala M. Wimalaratne","raw_affiliation_strings":["1 European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SD, 2Department of Genetics, University of Cambridge, Cambridge CB2 3EH, UK and 3Auckland Bioengineering Institute, University of Auckland, Symonds Street, Auckland 1010, New Zealand"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SD, 2Department of Genetics, University of Cambridge, Cambridge CB2 3EH, UK and 3Auckland Bioengineering Institute, University of Auckland, Symonds Street, Auckland 1010, New Zealand","institution_ids":["https://openalex.org/I154130895","https://openalex.org/I241749","https://openalex.org/I1303153112","https://openalex.org/I87048295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047905972","display_name":"Pierre Grenon","orcid":"https://orcid.org/0000-0003-4614-562X"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I154130895","display_name":"University of Auckland","ror":"https://ror.org/03b94tp07","country_code":"NZ","type":"education","lineage":["https://openalex.org/I154130895"]},{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]}],"countries":["GB","NZ"],"is_corresponding":false,"raw_author_name":"Pierre Grenon","raw_affiliation_strings":["1 European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SD, 2Department of Genetics, University of Cambridge, Cambridge CB2 3EH, UK and 3Auckland Bioengineering Institute, University of Auckland, Symonds Street, Auckland 1010, New Zealand"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SD, 2Department of Genetics, University of Cambridge, Cambridge CB2 3EH, UK and 3Auckland Bioengineering Institute, University of Auckland, Symonds Street, Auckland 1010, New Zealand","institution_ids":["https://openalex.org/I154130895","https://openalex.org/I241749","https://openalex.org/I1303153112","https://openalex.org/I87048295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043808311","display_name":"Robert Hoehndorf","orcid":"https://orcid.org/0000-0001-8149-5890"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I154130895","display_name":"University of Auckland","ror":"https://ror.org/03b94tp07","country_code":"NZ","type":"education","lineage":["https://openalex.org/I154130895"]},{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]}],"countries":["GB","NZ"],"is_corresponding":false,"raw_author_name":"Robert Hoehndorf","raw_affiliation_strings":["1 European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SD, 2Department of Genetics, University of Cambridge, Cambridge CB2 3EH, UK and 3Auckland Bioengineering Institute, University of Auckland, Symonds Street, Auckland 1010, New Zealand"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SD, 2Department of Genetics, University of Cambridge, Cambridge CB2 3EH, UK and 3Auckland Bioengineering Institute, University of Auckland, Symonds Street, Auckland 1010, New Zealand","institution_ids":["https://openalex.org/I154130895","https://openalex.org/I241749","https://openalex.org/I1303153112","https://openalex.org/I87048295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089900113","display_name":"Georgios V. Gkoutos","orcid":"https://orcid.org/0000-0002-2061-091X"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I154130895","display_name":"University of Auckland","ror":"https://ror.org/03b94tp07","country_code":"NZ","type":"education","lineage":["https://openalex.org/I154130895"]},{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]}],"countries":["GB","NZ"],"is_corresponding":false,"raw_author_name":"Georgios V. Gkoutos","raw_affiliation_strings":["1 European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SD, 2Department of Genetics, University of Cambridge, Cambridge CB2 3EH, UK and 3Auckland Bioengineering Institute, University of Auckland, Symonds Street, Auckland 1010, New Zealand"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SD, 2Department of Genetics, University of Cambridge, Cambridge CB2 3EH, UK and 3Auckland Bioengineering Institute, University of Auckland, Symonds Street, Auckland 1010, New Zealand","institution_ids":["https://openalex.org/I154130895","https://openalex.org/I241749","https://openalex.org/I1303153112","https://openalex.org/I87048295"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5054690280","display_name":"Bernard de Bono","orcid":"https://orcid.org/0000-0003-0638-5274"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I154130895","display_name":"University of Auckland","ror":"https://ror.org/03b94tp07","country_code":"NZ","type":"education","lineage":["https://openalex.org/I154130895"]},{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]}],"countries":["GB","NZ"],"is_corresponding":false,"raw_author_name":"Bernard de Bono","raw_affiliation_strings":["1 European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SD, 2Department of Genetics, University of Cambridge, Cambridge CB2 3EH, UK and 3Auckland Bioengineering Institute, University of Auckland, Symonds Street, Auckland 1010, New Zealand"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge CB10 1SD, 2Department of Genetics, University of Cambridge, Cambridge CB2 3EH, UK and 3Auckland Bioengineering Institute, University of Auckland, Symonds Street, Auckland 1010, New Zealand","institution_ids":["https://openalex.org/I154130895","https://openalex.org/I241749","https://openalex.org/I1303153112","https://openalex.org/I87048295"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5034436640"],"corresponding_institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I154130895","https://openalex.org/I241749","https://openalex.org/I87048295"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.0645,"has_fulltext":false,"cited_by_count":11,"citation_normalized_percentile":{"value":0.76392644,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":97},"biblio":{"volume":"28","issue":"3","first_page":"448","last_page":"450"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.6898000240325928,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.6898000240325928,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.24379999935626984,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10350","display_name":"Electronic Health Records Systems","score":0.014499999582767487,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8125253915786743},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.7641699910163879},{"id":"https://openalex.org/keywords/interoperability","display_name":"Interoperability","score":0.7206618785858154},{"id":"https://openalex.org/keywords/knowledge-base","display_name":"Knowledge base","score":0.5368692278862},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.5204577445983887},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.4922269880771637},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.44206178188323975},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.39187175035476685},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.38135185837745667},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.3643719553947449},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.34927845001220703},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.07745867967605591}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8125253915786743},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.7641699910163879},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.7206618785858154},{"id":"https://openalex.org/C4554734","wikidata":"https://www.wikidata.org/wiki/Q593744","display_name":"Knowledge base","level":2,"score":0.5368692278862},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.5204577445983887},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.4922269880771637},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.44206178188323975},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.39187175035476685},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.38135185837745667},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.3643719553947449},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.34927845001220703},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.07745867967605591},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006321","descriptor_name":"Heart","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D006321","descriptor_name":"Heart","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D006321","descriptor_name":"Heart","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/btr662","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr662","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22130590","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22130590","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:aber.ac.uk:publications/9b03e083-9e90-40b8-b2ac-587c52e45f17","is_oa":false,"landing_page_url":"http://hdl.handle.net/2160/10980","pdf_url":null,"source":{"id":"https://openalex.org/S4306401660","display_name":"Aberystwyth Research portal (Aberystwyth University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I16038530","host_organization_name":"Aberystwyth University","host_organization_lineage":["https://openalex.org/I16038530"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""},{"id":"pmh:oai:eprints.ucl.ac.uk.OAI2:10034850","is_oa":false,"landing_page_url":"http://discovery.ucl.ac.uk/10034850/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400024","display_name":"UCL Discovery (University College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I45129253","host_organization_name":"University College London","host_organization_lineage":["https://openalex.org/I45129253"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"   BIOINFORMATICS , 28  (3)   pp. 448-450.   (2012)      ","raw_type":"Article"},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/9d77c3ac-9c40-46fe-bcf7-ee898a9616f3","is_oa":false,"landing_page_url":"https://research.birmingham.ac.uk/en/publications/9d77c3ac-9c40-46fe-bcf7-ee898a9616f3","pdf_url":null,"source":{"id":"https://openalex.org/S4306402634","display_name":"University of Birmingham Research Portal (University of Birmingham)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I79619799","host_organization_name":"University of Birmingham","host_organization_lineage":["https://openalex.org/I79619799"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Wimalaratne, S M, Grenon, P, Hoehndorf, R, Gkoutos, G V & de Bono, B 2012, 'An infrastructure for ontology-based information systems in biomedicine: RICORDO case study', Bioinformatics, vol. 28, no. 3, pp. 448-450.","raw_type":"article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","score":0.6200000047683716,"id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":24,"referenced_works":["https://openalex.org/W1495014783","https://openalex.org/W1564494788","https://openalex.org/W1577231857","https://openalex.org/W1757909678","https://openalex.org/W1998671175","https://openalex.org/W2001758733","https://openalex.org/W2020561965","https://openalex.org/W2042880070","https://openalex.org/W2048495389","https://openalex.org/W2100525485","https://openalex.org/W2103017472","https://openalex.org/W2111299816","https://openalex.org/W2113142309","https://openalex.org/W2117902162","https://openalex.org/W2124991490","https://openalex.org/W2128591653","https://openalex.org/W2131555431","https://openalex.org/W2133550211","https://openalex.org/W2148014577","https://openalex.org/W6629620948","https://openalex.org/W6633616128","https://openalex.org/W6634438429","https://openalex.org/W6676813749","https://openalex.org/W6681676053"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W1892467659","https://openalex.org/W2362192218","https://openalex.org/W2393185060","https://openalex.org/W2152773768","https://openalex.org/W2120460904","https://openalex.org/W2370546856","https://openalex.org/W2889474329","https://openalex.org/W4237983101","https://openalex.org/W4236567086"],"abstract_inverted_index":{"SUMMARY:":[0],"The":[1,79,113],"article":[2],"presents":[3],"an":[4,45],"infrastructure":[5,27,80],"for":[6],"supporting":[7],"the":[8,16,50,59,73,89,95],"semantic":[9],"interoperability":[10],"of":[11,22,52,61,66,94,98],"biomedical":[12,99],"resources":[13],"based":[14],"on":[15],"management":[17,97],"(storing":[18],"and":[19,35,53,68,76,84,86,103,106,116],"inference-based":[20],"querying)":[21],"their":[23],"ontology-based":[24,37],"annotations.":[25],"This":[26],"consists":[28],"of:":[29],"(i)":[30],"a":[31,40,64],"repository":[32,75],"to":[33,48],"store":[34],"query":[36],"annotations;":[38],"(ii)":[39],"knowledge":[41,77,96],"base":[42],"server":[43],"with":[44,72],"inference":[46],"engine":[47],"support":[49,93],"storage":[51],"reasoning":[54],"over":[55],"ontologies":[56],"used":[57],"in":[58,92],"annotation":[60],"resources;":[62],"(iii)":[63],"set":[65],"applications":[67],"services":[69],"allowing":[70],"interaction":[71],"integrated":[74],"base.":[78],"is":[81],"being":[82],"prototyped":[83],"developed":[85],"evaluated":[87],"by":[88],"RICORDO":[90,114],"project":[91],"resources,":[100],"including":[101],"physiology":[102],"pharmacology":[104],"models":[105],"associated":[107],"clinical":[108],"data.":[109],"AVAILABILITY":[110],"AND":[111],"IMPLEMENTATION:":[112],"toolkit":[115],"its":[117],"source":[118],"code":[119],"are":[120],"freely":[121],"available":[122],"from":[123],"http://ricordo.eu/relevant-resources.":[124],"CONTACT:":[125],"sarala@ebi.ac.uk.":[126]},"counts_by_year":[{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":3}],"updated_date":"2026-06-23T13:55:30.953635","created_date":"2025-10-10T00:00:00"}
