{"id":"https://openalex.org/W2140207977","doi":"https://doi.org/10.1093/bioinformatics/btr661","title":"Metscape 2 bioinformatics tool for the analysis and visualization of metabolomics and gene expression data","display_name":"Metscape 2 bioinformatics tool for the analysis and visualization of metabolomics and gene expression data","publication_year":2011,"publication_date":"2011-11-30","ids":{"openalex":"https://openalex.org/W2140207977","doi":"https://doi.org/10.1093/bioinformatics/btr661","mag":"2140207977","pmid":"https://pubmed.ncbi.nlm.nih.gov/22135418"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btr661","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr661","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/3/373/48873080/bioinformatics_28_3_373.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/28/3/373/48873080/bioinformatics_28_3_373.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5007233450","display_name":"Alla Karnovsky","orcid":"https://orcid.org/0000-0001-7388-8520"},"institutions":[{"id":"https://openalex.org/I119439378","display_name":"University of Verona","ror":"https://ror.org/039bp8j42","country_code":"IT","type":"education","lineage":["https://openalex.org/I119439378"]},{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["IT","US"],"is_corresponding":true,"raw_author_name":"Alla Karnovsky","raw_affiliation_strings":["1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA"],"affiliations":[{"raw_affiliation_string":"1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA","institution_ids":["https://openalex.org/I119439378","https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076809103","display_name":"Terry E. Weymouth","orcid":null},"institutions":[{"id":"https://openalex.org/I119439378","display_name":"University of Verona","ror":"https://ror.org/039bp8j42","country_code":"IT","type":"education","lineage":["https://openalex.org/I119439378"]},{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["IT","US"],"is_corresponding":false,"raw_author_name":"Terry Weymouth","raw_affiliation_strings":["1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA"],"affiliations":[{"raw_affiliation_string":"1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA","institution_ids":["https://openalex.org/I119439378","https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075102732","display_name":"Tim Hull","orcid":null},"institutions":[{"id":"https://openalex.org/I119439378","display_name":"University of Verona","ror":"https://ror.org/039bp8j42","country_code":"IT","type":"education","lineage":["https://openalex.org/I119439378"]},{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["IT","US"],"is_corresponding":false,"raw_author_name":"Tim Hull","raw_affiliation_strings":["1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA"],"affiliations":[{"raw_affiliation_string":"1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA","institution_ids":["https://openalex.org/I119439378","https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045247997","display_name":"V. Glenn Tarcea","orcid":null},"institutions":[{"id":"https://openalex.org/I119439378","display_name":"University of Verona","ror":"https://ror.org/039bp8j42","country_code":"IT","type":"education","lineage":["https://openalex.org/I119439378"]},{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["IT","US"],"is_corresponding":false,"raw_author_name":"V. Glenn Tarcea","raw_affiliation_strings":["1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA"],"affiliations":[{"raw_affiliation_string":"1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA","institution_ids":["https://openalex.org/I119439378","https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030474140","display_name":"Giovanni Scardoni","orcid":null},"institutions":[{"id":"https://openalex.org/I119439378","display_name":"University of Verona","ror":"https://ror.org/039bp8j42","country_code":"IT","type":"education","lineage":["https://openalex.org/I119439378"]},{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["IT","US"],"is_corresponding":false,"raw_author_name":"Giovanni Scardoni","raw_affiliation_strings":["1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA"],"affiliations":[{"raw_affiliation_string":"1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA","institution_ids":["https://openalex.org/I119439378","https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073711928","display_name":"Carlo Laudanna","orcid":"https://orcid.org/0000-0003-4050-1056"},"institutions":[{"id":"https://openalex.org/I119439378","display_name":"University of Verona","ror":"https://ror.org/039bp8j42","country_code":"IT","type":"education","lineage":["https://openalex.org/I119439378"]},{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["IT","US"],"is_corresponding":false,"raw_author_name":"Carlo Laudanna","raw_affiliation_strings":["1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA"],"affiliations":[{"raw_affiliation_string":"1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA","institution_ids":["https://openalex.org/I119439378","https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028712728","display_name":"Maureen A. Sartor","orcid":"https://orcid.org/0000-0001-6155-5702"},"institutions":[{"id":"https://openalex.org/I119439378","display_name":"University of Verona","ror":"https://ror.org/039bp8j42","country_code":"IT","type":"education","lineage":["https://openalex.org/I119439378"]},{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["IT","US"],"is_corresponding":false,"raw_author_name":"Maureen A. Sartor","raw_affiliation_strings":["1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA"],"affiliations":[{"raw_affiliation_string":"1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA","institution_ids":["https://openalex.org/I119439378","https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022012717","display_name":"Kathleen A. Stringer","orcid":"https://orcid.org/0000-0003-0238-7774"},"institutions":[{"id":"https://openalex.org/I119439378","display_name":"University of Verona","ror":"https://ror.org/039bp8j42","country_code":"IT","type":"education","lineage":["https://openalex.org/I119439378"]},{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["IT","US"],"is_corresponding":false,"raw_author_name":"Kathleen A. Stringer","raw_affiliation_strings":["1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA"],"affiliations":[{"raw_affiliation_string":"1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA","institution_ids":["https://openalex.org/I119439378","https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090550596","display_name":"H. V. Jagadish","orcid":"https://orcid.org/0000-0003-0724-5214"},"institutions":[{"id":"https://openalex.org/I119439378","display_name":"University of Verona","ror":"https://ror.org/039bp8j42","country_code":"IT","type":"education","lineage":["https://openalex.org/I119439378"]},{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["IT","US"],"is_corresponding":false,"raw_author_name":"H. V. Jagadish","raw_affiliation_strings":["1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA"],"affiliations":[{"raw_affiliation_string":"1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA","institution_ids":["https://openalex.org/I119439378","https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054894697","display_name":"Charles Burant","orcid":"https://orcid.org/0000-0001-9189-5003"},"institutions":[{"id":"https://openalex.org/I119439378","display_name":"University of Verona","ror":"https://ror.org/039bp8j42","country_code":"IT","type":"education","lineage":["https://openalex.org/I119439378"]},{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["IT","US"],"is_corresponding":false,"raw_author_name":"Charles Burant","raw_affiliation_strings":["1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA"],"affiliations":[{"raw_affiliation_string":"1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA","institution_ids":["https://openalex.org/I119439378","https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Brian Athey","orcid":null},"institutions":[{"id":"https://openalex.org/I119439378","display_name":"University of Verona","ror":"https://ror.org/039bp8j42","country_code":"IT","type":"education","lineage":["https://openalex.org/I119439378"]},{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["IT","US"],"is_corresponding":false,"raw_author_name":"Brian Athey","raw_affiliation_strings":["1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA"],"affiliations":[{"raw_affiliation_string":"1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA","institution_ids":["https://openalex.org/I119439378","https://openalex.org/I27837315"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5008478119","display_name":"Gilbert S. Omenn","orcid":"https://orcid.org/0000-0002-8976-6074"},"institutions":[{"id":"https://openalex.org/I119439378","display_name":"University of Verona","ror":"https://ror.org/039bp8j42","country_code":"IT","type":"education","lineage":["https://openalex.org/I119439378"]},{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["IT","US"],"is_corresponding":false,"raw_author_name":"Gilbert S. Omenn","raw_affiliation_strings":["1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA"],"affiliations":[{"raw_affiliation_string":"1 Center for Computational Medicine and Bioinformatics, 2National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109-2218, USA, 3Center for Biomedical Computing, 4Department of Pathology, University of Verona, Strada le Grazie, 8, 37134 Verona, Italy, 5Department of Clinical, Social and Administrative Sciences, College of Pharmacy, 6College of Engineering, 7Department of Internal Medicine and 8Department of Human Genetics and School of Public Health, University of Michigan, Ann Arbor, MI 48109-2218, USA","institution_ids":["https://openalex.org/I119439378","https://openalex.org/I27837315"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":12,"corresponding_author_ids":["https://openalex.org/A5007233450"],"corresponding_institution_ids":["https://openalex.org/I119439378","https://openalex.org/I27837315"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":4.1353,"has_fulltext":false,"cited_by_count":431,"citation_normalized_percentile":{"value":0.95006231,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"28","issue":"3","first_page":"373","last_page":"380"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metabolomics","display_name":"Metabolomics","score":0.5506153702735901},{"id":"https://openalex.org/keywords/informatics","display_name":"Informatics","score":0.5408613681793213},{"id":"https://openalex.org/keywords/kegg","display_name":"KEGG","score":0.5368251204490662},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5332450866699219},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4752597510814667},{"id":"https://openalex.org/keywords/health-informatics-tools","display_name":"Health informatics tools","score":0.4586368501186371},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.4457639753818512},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3229823112487793},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2906067967414856},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.2647083103656769},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.20934796333312988},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.19838973879814148},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08119705319404602}],"concepts":[{"id":"https://openalex.org/C21565614","wikidata":"https://www.wikidata.org/wiki/Q12149006","display_name":"Metabolomics","level":2,"score":0.5506153702735901},{"id":"https://openalex.org/C191630685","wikidata":"https://www.wikidata.org/wiki/Q4027615","display_name":"Informatics","level":2,"score":0.5408613681793213},{"id":"https://openalex.org/C152724338","wikidata":"https://www.wikidata.org/wiki/Q909442","display_name":"KEGG","level":5,"score":0.5368251204490662},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5332450866699219},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4752597510814667},{"id":"https://openalex.org/C167785021","wikidata":"https://www.wikidata.org/wiki/Q5691083","display_name":"Health informatics tools","level":3,"score":0.4586368501186371},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.4457639753818512},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3229823112487793},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2906067967414856},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.2647083103656769},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.20934796333312988},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.19838973879814148},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08119705319404602},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007249","descriptor_name":"Inflammation","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D007249","descriptor_name":"Inflammation","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D007249","descriptor_name":"Inflammation","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D007249","descriptor_name":"Inflammation","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010190","descriptor_name":"Pancreatic Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010190","descriptor_name":"Pancreatic Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010190","descriptor_name":"Pancreatic Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010190","descriptor_name":"Pancreatic Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010190","descriptor_name":"Pancreatic Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010190","descriptor_name":"Pancreatic Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010190","descriptor_name":"Pancreatic Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010190","descriptor_name":"Pancreatic Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018805","descriptor_name":"Sepsis","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D018805","descriptor_name":"Sepsis","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D018805","descriptor_name":"Sepsis","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D018805","descriptor_name":"Sepsis","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btr661","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr661","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/3/373/48873080/bioinformatics_28_3_373.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22135418","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22135418","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:3268237","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3268237","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:europepmc.org:2557559","is_oa":false,"landing_page_url":"http://europepmc.org/articles/PMC3268237","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btr661","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr661","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/3/373/48873080/bioinformatics_28_3_373.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.4399999976158142}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2140207977.pdf","grobid_xml":"https://content.openalex.org/works/W2140207977.grobid-xml"},"referenced_works_count":47,"referenced_works":["https://openalex.org/W1417555467","https://openalex.org/W1946371345","https://openalex.org/W1966728362","https://openalex.org/W1971309308","https://openalex.org/W1974627635","https://openalex.org/W1977914031","https://openalex.org/W1980611128","https://openalex.org/W1982903507","https://openalex.org/W2003408736","https://openalex.org/W2018340447","https://openalex.org/W2019240775","https://openalex.org/W2036539000","https://openalex.org/W2037529704","https://openalex.org/W2039216956","https://openalex.org/W2050153048","https://openalex.org/W2056314298","https://openalex.org/W2077689825","https://openalex.org/W2081010896","https://openalex.org/W2094223456","https://openalex.org/W2099774431","https://openalex.org/W2104108767","https://openalex.org/W2108408244","https://openalex.org/W2112513984","https://openalex.org/W2116909785","https://openalex.org/W2120610506","https://openalex.org/W2122683221","https://openalex.org/W2125318012","https://openalex.org/W2130410032","https://openalex.org/W2132700592","https://openalex.org/W2134394193","https://openalex.org/W2136438591","https://openalex.org/W2143326478","https://openalex.org/W2150315679","https://openalex.org/W2154790710","https://openalex.org/W2154972152","https://openalex.org/W2154999108","https://openalex.org/W2159675211","https://openalex.org/W2163316491","https://openalex.org/W2163841023","https://openalex.org/W2165674132","https://openalex.org/W2165816035","https://openalex.org/W2165944862","https://openalex.org/W2167540852","https://openalex.org/W2167648442","https://openalex.org/W2255854229","https://openalex.org/W4242861640","https://openalex.org/W6628368890"],"related_works":["https://openalex.org/W1813161579","https://openalex.org/W1986674928","https://openalex.org/W2017123803","https://openalex.org/W2320705913","https://openalex.org/W2974071312","https://openalex.org/W2005011662","https://openalex.org/W2955949264","https://openalex.org/W4311292698","https://openalex.org/W4309236105","https://openalex.org/W3174814859"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":22},{"year":2024,"cited_by_count":31},{"year":2023,"cited_by_count":36},{"year":2022,"cited_by_count":35},{"year":2021,"cited_by_count":43},{"year":2020,"cited_by_count":53},{"year":2019,"cited_by_count":37},{"year":2018,"cited_by_count":46},{"year":2017,"cited_by_count":40},{"year":2016,"cited_by_count":31},{"year":2015,"cited_by_count":21},{"year":2014,"cited_by_count":12},{"year":2013,"cited_by_count":13},{"year":2012,"cited_by_count":5}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
