{"id":"https://openalex.org/W2114904907","doi":"https://doi.org/10.1093/bioinformatics/btr586","title":"BioPAX support in CellDesigner","display_name":"BioPAX support in CellDesigner","publication_year":2011,"publication_date":"2011-10-21","ids":{"openalex":"https://openalex.org/W2114904907","doi":"https://doi.org/10.1093/bioinformatics/btr586","mag":"2114904907","pmid":"https://pubmed.ncbi.nlm.nih.gov/22021903"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btr586","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr586","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/24/3437/16902880/btr586.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/27/24/3437/16902880/btr586.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5060575386","display_name":"Huaiyu Mi","orcid":"https://orcid.org/0000-0001-8721-202X"},"institutions":[{"id":"https://openalex.org/I203951103","display_name":"Keio University","ror":"https://ror.org/02kn6nx58","country_code":"JP","type":"education","lineage":["https://openalex.org/I203951103"]},{"id":"https://openalex.org/I1174212","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60","country_code":"US","type":"education","lineage":["https://openalex.org/I1174212"]},{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]}],"countries":["JP","US"],"is_corresponding":true,"raw_author_name":"Huaiyu Mi","raw_affiliation_strings":["1 Department of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, 2Computational Biology Center, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA, 3Systems Biology Institute, Tokyo and 4Department of Biosciences and Informatics, Keio University, Hiyoshi, Kouhoku-ku, Yokohama, Japan"],"affiliations":[{"raw_affiliation_string":"1 Department of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, 2Computational Biology Center, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA, 3Systems Biology Institute, Tokyo and 4Department of Biosciences and Informatics, Keio University, Hiyoshi, Kouhoku-ku, Yokohama, Japan","institution_ids":["https://openalex.org/I1174212","https://openalex.org/I203951103","https://openalex.org/I1334819555"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005316199","display_name":"Anushya Muruganujan","orcid":"https://orcid.org/0000-0001-7169-5864"},"institutions":[{"id":"https://openalex.org/I203951103","display_name":"Keio University","ror":"https://ror.org/02kn6nx58","country_code":"JP","type":"education","lineage":["https://openalex.org/I203951103"]},{"id":"https://openalex.org/I1174212","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60","country_code":"US","type":"education","lineage":["https://openalex.org/I1174212"]},{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]}],"countries":["JP","US"],"is_corresponding":false,"raw_author_name":"Anushya Muruganujan","raw_affiliation_strings":["1 Department of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, 2Computational Biology Center, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA, 3Systems Biology Institute, Tokyo and 4Department of Biosciences and Informatics, Keio University, Hiyoshi, Kouhoku-ku, Yokohama, Japan"],"affiliations":[{"raw_affiliation_string":"1 Department of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, 2Computational Biology Center, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA, 3Systems Biology Institute, Tokyo and 4Department of Biosciences and Informatics, Keio University, Hiyoshi, Kouhoku-ku, Yokohama, Japan","institution_ids":["https://openalex.org/I1174212","https://openalex.org/I203951103","https://openalex.org/I1334819555"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037803004","display_name":"Emek Demir","orcid":"https://orcid.org/0000-0002-3663-7113"},"institutions":[{"id":"https://openalex.org/I203951103","display_name":"Keio University","ror":"https://ror.org/02kn6nx58","country_code":"JP","type":"education","lineage":["https://openalex.org/I203951103"]},{"id":"https://openalex.org/I1174212","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60","country_code":"US","type":"education","lineage":["https://openalex.org/I1174212"]},{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]}],"countries":["JP","US"],"is_corresponding":false,"raw_author_name":"Emek Demir","raw_affiliation_strings":["1 Department of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, 2Computational Biology Center, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA, 3Systems Biology Institute, Tokyo and 4Department of Biosciences and Informatics, Keio University, Hiyoshi, Kouhoku-ku, Yokohama, Japan"],"affiliations":[{"raw_affiliation_string":"1 Department of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, 2Computational Biology Center, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA, 3Systems Biology Institute, Tokyo and 4Department of Biosciences and Informatics, Keio University, Hiyoshi, Kouhoku-ku, Yokohama, Japan","institution_ids":["https://openalex.org/I1174212","https://openalex.org/I203951103","https://openalex.org/I1334819555"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108400380","display_name":"Yukiko Matsuoka","orcid":null},"institutions":[{"id":"https://openalex.org/I203951103","display_name":"Keio University","ror":"https://ror.org/02kn6nx58","country_code":"JP","type":"education","lineage":["https://openalex.org/I203951103"]},{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]},{"id":"https://openalex.org/I1174212","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60","country_code":"US","type":"education","lineage":["https://openalex.org/I1174212"]}],"countries":["JP","US"],"is_corresponding":false,"raw_author_name":"Yukiko Matsuoka","raw_affiliation_strings":["1 Department of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, 2Computational Biology Center, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA, 3Systems Biology Institute, Tokyo and 4Department of Biosciences and Informatics, Keio University, Hiyoshi, Kouhoku-ku, Yokohama, Japan"],"affiliations":[{"raw_affiliation_string":"1 Department of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, 2Computational Biology Center, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA, 3Systems Biology Institute, Tokyo and 4Department of Biosciences and Informatics, Keio University, Hiyoshi, Kouhoku-ku, Yokohama, Japan","institution_ids":["https://openalex.org/I1174212","https://openalex.org/I203951103","https://openalex.org/I1334819555"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008451312","display_name":"Akira Funahashi","orcid":"https://orcid.org/0000-0003-0605-239X"},"institutions":[{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]},{"id":"https://openalex.org/I1174212","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60","country_code":"US","type":"education","lineage":["https://openalex.org/I1174212"]},{"id":"https://openalex.org/I203951103","display_name":"Keio University","ror":"https://ror.org/02kn6nx58","country_code":"JP","type":"education","lineage":["https://openalex.org/I203951103"]}],"countries":["JP","US"],"is_corresponding":false,"raw_author_name":"Akira Funahashi","raw_affiliation_strings":["1 Department of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, 2Computational Biology Center, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA, 3Systems Biology Institute, Tokyo and 4Department of Biosciences and Informatics, Keio University, Hiyoshi, Kouhoku-ku, Yokohama, Japan"],"affiliations":[{"raw_affiliation_string":"1 Department of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, 2Computational Biology Center, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA, 3Systems Biology Institute, Tokyo and 4Department of Biosciences and Informatics, Keio University, Hiyoshi, Kouhoku-ku, Yokohama, Japan","institution_ids":["https://openalex.org/I1174212","https://openalex.org/I203951103","https://openalex.org/I1334819555"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086835862","display_name":"Hiroaki Kitano","orcid":"https://orcid.org/0000-0002-3589-1953"},"institutions":[{"id":"https://openalex.org/I1174212","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60","country_code":"US","type":"education","lineage":["https://openalex.org/I1174212"]},{"id":"https://openalex.org/I203951103","display_name":"Keio University","ror":"https://ror.org/02kn6nx58","country_code":"JP","type":"education","lineage":["https://openalex.org/I203951103"]},{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]}],"countries":["JP","US"],"is_corresponding":false,"raw_author_name":"Hiroaki Kitano","raw_affiliation_strings":["1 Department of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, 2Computational Biology Center, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA, 3Systems Biology Institute, Tokyo and 4Department of Biosciences and Informatics, Keio University, Hiyoshi, Kouhoku-ku, Yokohama, Japan"],"affiliations":[{"raw_affiliation_string":"1 Department of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, 2Computational Biology Center, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA, 3Systems Biology Institute, Tokyo and 4Department of Biosciences and Informatics, Keio University, Hiyoshi, Kouhoku-ku, Yokohama, Japan","institution_ids":["https://openalex.org/I1174212","https://openalex.org/I203951103","https://openalex.org/I1334819555"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016853551","display_name":"Paul D. Thomas","orcid":"https://orcid.org/0000-0002-9074-3507"},"institutions":[{"id":"https://openalex.org/I203951103","display_name":"Keio University","ror":"https://ror.org/02kn6nx58","country_code":"JP","type":"education","lineage":["https://openalex.org/I203951103"]},{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]},{"id":"https://openalex.org/I1174212","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60","country_code":"US","type":"education","lineage":["https://openalex.org/I1174212"]}],"countries":["JP","US"],"is_corresponding":false,"raw_author_name":"Paul D. Thomas","raw_affiliation_strings":["1 Department of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, 2Computational Biology Center, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA, 3Systems Biology Institute, Tokyo and 4Department of Biosciences and Informatics, Keio University, Hiyoshi, Kouhoku-ku, Yokohama, Japan"],"affiliations":[{"raw_affiliation_string":"1 Department of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, 2Computational Biology Center, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA, 3Systems Biology Institute, Tokyo and 4Department of Biosciences and Informatics, Keio University, Hiyoshi, Kouhoku-ku, Yokohama, Japan","institution_ids":["https://openalex.org/I1174212","https://openalex.org/I203951103","https://openalex.org/I1334819555"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5060575386"],"corresponding_institution_ids":["https://openalex.org/I1174212","https://openalex.org/I1334819555","https://openalex.org/I203951103"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.328,"has_fulltext":true,"cited_by_count":23,"citation_normalized_percentile":{"value":0.7989913,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"27","issue":"24","first_page":"3437","last_page":"3438"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/plug-in","display_name":"Plug-in","score":0.8491314649581909},{"id":"https://openalex.org/keywords/file-transfer-protocol","display_name":"File Transfer Protocol","score":0.7994814515113831},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.772344708442688},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.6311794519424438},{"id":"https://openalex.org/keywords/data-exchange","display_name":"Data exchange","score":0.5330464243888855},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3914007246494293},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.34466075897216797},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.2609022259712219},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.18891027569770813}],"concepts":[{"id":"https://openalex.org/C4924752","wikidata":"https://www.wikidata.org/wiki/Q184148","display_name":"Plug-in","level":2,"score":0.8491314649581909},{"id":"https://openalex.org/C169485995","wikidata":"https://www.wikidata.org/wiki/Q42283","display_name":"File Transfer Protocol","level":3,"score":0.7994814515113831},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.772344708442688},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.6311794519424438},{"id":"https://openalex.org/C15845906","wikidata":"https://www.wikidata.org/wiki/Q1172338","display_name":"Data exchange","level":2,"score":0.5330464243888855},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3914007246494293},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.34466075897216797},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.2609022259712219},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.18891027569770813}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btr586","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr586","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/24/3437/16902880/btr586.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22021903","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22021903","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:2521084","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3232372","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:open-archive.highwire.org:bioinfo:27/24/3437","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/cgi/content/short/27/24/3437","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btr586","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr586","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/24/3437/16902880/btr586.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure","score":0.41999998688697815}],"awards":[],"funders":[{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2114904907.pdf","grobid_xml":"https://content.openalex.org/works/W2114904907.grobid-xml"},"referenced_works_count":14,"referenced_works":["https://openalex.org/W1236321187","https://openalex.org/W1966387099","https://openalex.org/W1969709265","https://openalex.org/W2006353394","https://openalex.org/W2028133290","https://openalex.org/W2033377040","https://openalex.org/W2038264484","https://openalex.org/W2069157810","https://openalex.org/W2096766502","https://openalex.org/W2108366237","https://openalex.org/W2128601422","https://openalex.org/W2150908245","https://openalex.org/W2158439765","https://openalex.org/W4233060585"],"related_works":["https://openalex.org/W2349516242","https://openalex.org/W2378353542","https://openalex.org/W2358003099","https://openalex.org/W4287378204","https://openalex.org/W2981957539","https://openalex.org/W2373243130","https://openalex.org/W47352601","https://openalex.org/W2479761186","https://openalex.org/W3088189910","https://openalex.org/W3208471604"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":1}],"updated_date":"2026-03-09T08:58:05.943551","created_date":"2025-10-10T00:00:00"}
