{"id":"https://openalex.org/W2103964110","doi":"https://doi.org/10.1093/bioinformatics/btr529","title":"inSilicoDb: an R/Bioconductor package for accessing human Affymetrix expert-curated datasets from GEO","display_name":"inSilicoDb: an R/Bioconductor package for accessing human Affymetrix expert-curated datasets from GEO","publication_year":2011,"publication_date":"2011-09-21","ids":{"openalex":"https://openalex.org/W2103964110","doi":"https://doi.org/10.1093/bioinformatics/btr529","mag":"2103964110","pmid":"https://pubmed.ncbi.nlm.nih.gov/21937664"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btr529","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr529","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/22/3204/48864405/bioinformatics_27_22_3204.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/27/22/3204/48864405/bioinformatics_27_22_3204.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5013075716","display_name":"Jonatan Taminau","orcid":"https://orcid.org/0000-0002-4907-3994"},"institutions":[{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]},{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]}],"countries":["BE"],"is_corresponding":true,"raw_author_name":"Jonatan Taminau","raw_affiliation_strings":["1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium"],"affiliations":[{"raw_affiliation_string":"1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium","institution_ids":["https://openalex.org/I13469542","https://openalex.org/I132053463"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072530844","display_name":"David Steenhoff","orcid":null},"institutions":[{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]},{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"David Steenhoff","raw_affiliation_strings":["1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium"],"affiliations":[{"raw_affiliation_string":"1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium","institution_ids":["https://openalex.org/I13469542","https://openalex.org/I132053463"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040151748","display_name":"Alain Coletta","orcid":null},"institutions":[{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]},{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Alain Coletta","raw_affiliation_strings":["1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium"],"affiliations":[{"raw_affiliation_string":"1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium","institution_ids":["https://openalex.org/I13469542","https://openalex.org/I132053463"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067616468","display_name":"Stijn Meganck","orcid":"https://orcid.org/0000-0002-9195-7603"},"institutions":[{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]},{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Stijn Meganck","raw_affiliation_strings":["1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium"],"affiliations":[{"raw_affiliation_string":"1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium","institution_ids":["https://openalex.org/I13469542","https://openalex.org/I132053463"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027449898","display_name":"Cosmin Lazar","orcid":"https://orcid.org/0000-0001-8287-717X"},"institutions":[{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]},{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Cosmin Lazar","raw_affiliation_strings":["1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium"],"affiliations":[{"raw_affiliation_string":"1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium","institution_ids":["https://openalex.org/I13469542","https://openalex.org/I132053463"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083182095","display_name":"Virginie de Schaetzen","orcid":null},"institutions":[{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]},{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Virginie de Schaetzen","raw_affiliation_strings":["1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium"],"affiliations":[{"raw_affiliation_string":"1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium","institution_ids":["https://openalex.org/I13469542","https://openalex.org/I132053463"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005633157","display_name":"Robin Duqu\u00e9","orcid":null},"institutions":[{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]},{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Robin Duque","raw_affiliation_strings":["1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium"],"affiliations":[{"raw_affiliation_string":"1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium","institution_ids":["https://openalex.org/I13469542","https://openalex.org/I132053463"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033936531","display_name":"Colin Molter","orcid":null},"institutions":[{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]},{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Colin Molter","raw_affiliation_strings":["1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium"],"affiliations":[{"raw_affiliation_string":"1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium","institution_ids":["https://openalex.org/I13469542","https://openalex.org/I132053463"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032019511","display_name":"Hugues Bersini","orcid":"https://orcid.org/0000-0001-5820-7360"},"institutions":[{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]},{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Hugues Bersini","raw_affiliation_strings":["1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium"],"affiliations":[{"raw_affiliation_string":"1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium","institution_ids":["https://openalex.org/I13469542","https://openalex.org/I132053463"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064553018","display_name":"Ann Now\u00e9","orcid":"https://orcid.org/0000-0001-6346-4564"},"institutions":[{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]},{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Ann Now\u00e9","raw_affiliation_strings":["1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium"],"affiliations":[{"raw_affiliation_string":"1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium","institution_ids":["https://openalex.org/I13469542","https://openalex.org/I132053463"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5030327001","display_name":"David Sol\u00eds","orcid":"https://orcid.org/0000-0002-9431-2720"},"institutions":[{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]},{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"David Y. Weiss Sol\u00eds","raw_affiliation_strings":["1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium"],"affiliations":[{"raw_affiliation_string":"1 CoMo, Department of Computer Science, Vrije Universiteit Brussel, Pleinlaan 2, 2IRIDIA-CoDE, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50 and 3ETRO, Department of Electronics and Informatics, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium","institution_ids":["https://openalex.org/I13469542","https://openalex.org/I132053463"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5013075716"],"corresponding_institution_ids":["https://openalex.org/I132053463","https://openalex.org/I13469542"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":2.5238,"has_fulltext":false,"cited_by_count":63,"citation_normalized_percentile":{"value":0.89741477,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"27","issue":"22","first_page":"3204","last_page":"3205"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9901000261306763,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bioconductor","display_name":"Bioconductor","score":0.9774616956710815},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7727519869804382},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.6663856506347656},{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.631273627281189},{"id":"https://openalex.org/keywords/r-package","display_name":"R package","score":0.6298030614852905},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.48568829894065857},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4341583549976349},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.42683014273643494},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3001670837402344},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.15269029140472412},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10387858748435974}],"concepts":[{"id":"https://openalex.org/C2779694297","wikidata":"https://www.wikidata.org/wiki/Q2888953","display_name":"Bioconductor","level":3,"score":0.9774616956710815},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7727519869804382},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.6663856506347656},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.631273627281189},{"id":"https://openalex.org/C2984074130","wikidata":"https://www.wikidata.org/wiki/Q73539779","display_name":"R package","level":2,"score":0.6298030614852905},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.48568829894065857},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4341583549976349},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.42683014273643494},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3001670837402344},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.15269029140472412},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10387858748435974},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btr529","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr529","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/22/3204/48864405/bioinformatics_27_22_3204.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:21937664","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21937664","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:dipot.ulb.ac.be:2013/189772","is_oa":false,"landing_page_url":"http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/189772","pdf_url":null,"source":{"id":"https://openalex.org/S4306401063","display_name":"D\u00e9p\u00f4t institutionnel de l'Universit\u00e9 libre de Bruxelles (Universit\u00e9 Libre de Bruxelles)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I132053463","host_organization_name":"Universit\u00e9 Libre de Bruxelles","host_organization_lineage":["https://openalex.org/I132053463"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 27 (22","raw_type":"info:ulb-repo/semantics/openurl/article"},{"id":"pmh:oai:open-archive.highwire.org:bioinfo:27/22/3204","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/cgi/content/short/27/22/3204","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btr529","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr529","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/22/3204/48864405/bioinformatics_27_22_3204.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure","score":0.49000000953674316}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2103964110.pdf","grobid_xml":"https://content.openalex.org/works/W2103964110.grobid-xml"},"referenced_works_count":7,"referenced_works":["https://openalex.org/W1979916898","https://openalex.org/W1986651391","https://openalex.org/W2020541351","https://openalex.org/W2100239923","https://openalex.org/W2113878188","https://openalex.org/W2134015035","https://openalex.org/W2160697532"],"related_works":["https://openalex.org/W2148708580","https://openalex.org/W2982252354","https://openalex.org/W2728564446","https://openalex.org/W3045904767","https://openalex.org/W2161868542","https://openalex.org/W2140163842","https://openalex.org/W2128360321","https://openalex.org/W3156537409","https://openalex.org/W2747931568","https://openalex.org/W2133055377"],"abstract_inverted_index":{"Microarray":[0],"technology":[1],"has":[2],"become":[3,15],"an":[4],"integral":[5],"part":[6],"of":[7,13,22,42,79,104],"biomedical":[8],"research":[9],"and":[10],"increasing":[11],"amounts":[12],"datasets":[14,24],"available":[16],"through":[17],"public":[18],"repositories.":[19],"However,":[20],"re-use":[21],"these":[23],"is":[25,51,107],"severely":[26],"hindered":[27],"by":[28,90],"unstructured,":[29],"missing":[30],"or":[31],"incorrect":[32],"biological":[33],"samples":[34],"information;":[35],"as":[36,38],"well":[37],"the":[39,56,84,102],"wide":[40],"variety":[41],"preprocessing":[43],"methods":[44],"in":[45,95],"use.":[46],"The":[47,77],"inSilicoDb":[48],"R/Bioconductor":[49],"package":[50,81],"a":[52,59,92],"command-line":[53],"front-end":[54],"to":[55],"InSilico":[57],"DB,":[58],"web-based":[60],"database":[61],"currently":[62],"containing":[63],"86":[64],"104":[65],"expert-curated":[66],"human":[67],"Affymetrix":[68],"expression":[69],"profiles":[70],"compiled":[71],"from":[72],"1937":[73],"GEO":[74],"repository":[75],"series.":[76],"use":[78],"this":[80],"builds":[82],"on":[83,88],"Bioconductor":[85],"project's":[86],"focus":[87],"reproducibility":[89],"enabling":[91],"clear":[93],"workflow":[94],"which":[96],"not":[97],"only":[98],"analysis,":[99],"but":[100],"also":[101],"retrieval":[103],"verified":[105],"data":[106],"supported.":[108]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":12},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":13},{"year":2014,"cited_by_count":9},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":7}],"updated_date":"2026-03-10T16:38:18.471706","created_date":"2025-10-10T00:00:00"}
