{"id":"https://openalex.org/W2151031196","doi":"https://doi.org/10.1093/bioinformatics/btr525","title":"Computational prediction of eukaryotic phosphorylation sites","display_name":"Computational prediction of eukaryotic phosphorylation sites","publication_year":2011,"publication_date":"2011-09-16","ids":{"openalex":"https://openalex.org/W2151031196","doi":"https://doi.org/10.1093/bioinformatics/btr525","mag":"2151031196","pmid":"https://pubmed.ncbi.nlm.nih.gov/21926126"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btr525","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr525","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/21/2927/583531/btr525.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/27/21/2927/583531/btr525.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055263630","display_name":"Brett Trost","orcid":"https://orcid.org/0000-0003-4863-7273"},"institutions":[{"id":"https://openalex.org/I32625721","display_name":"University of Saskatchewan","ror":"https://ror.org/010x8gc63","country_code":"CA","type":"education","lineage":["https://openalex.org/I32625721"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Brett Trost","raw_affiliation_strings":["Department of Computer Science, University of Saskatchewan, Saskatoon, SK S7N 5C9, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Saskatchewan, Saskatoon, SK S7N 5C9, Canada","institution_ids":["https://openalex.org/I32625721"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5034538230","display_name":"Anthony Kusalik","orcid":"https://orcid.org/0000-0001-9278-8859"},"institutions":[{"id":"https://openalex.org/I32625721","display_name":"University of Saskatchewan","ror":"https://ror.org/010x8gc63","country_code":"CA","type":"education","lineage":["https://openalex.org/I32625721"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Anthony Kusalik","raw_affiliation_strings":["Department of Computer Science, University of Saskatchewan, Saskatoon, SK S7N 5C9, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Saskatchewan, Saskatoon, SK S7N 5C9, Canada","institution_ids":["https://openalex.org/I32625721"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5055263630"],"corresponding_institution_ids":["https://openalex.org/I32625721"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":5.3355,"has_fulltext":false,"cited_by_count":157,"citation_normalized_percentile":{"value":0.9670024,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"27","issue":"21","first_page":"2927","last_page":"2935"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/phosphorylation","display_name":"Phosphorylation","score":0.8541955947875977},{"id":"https://openalex.org/keywords/kinase","display_name":"Kinase","score":0.7201824188232422},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6241333484649658},{"id":"https://openalex.org/keywords/protein-phosphorylation","display_name":"Protein phosphorylation","score":0.6228917837142944},{"id":"https://openalex.org/keywords/mechanism","display_name":"Mechanism (biology)","score":0.5143462419509888},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.5045684576034546},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4749053716659546},{"id":"https://openalex.org/keywords/posttranslational-modification","display_name":"Posttranslational modification","score":0.4408296048641205},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.43922650814056396},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4201539158821106},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.38028281927108765},{"id":"https://openalex.org/keywords/protein-kinase-a","display_name":"Protein kinase A","score":0.3346711993217468},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.3093186616897583},{"id":"https://openalex.org/keywords/enzyme","display_name":"Enzyme","score":0.10483351349830627}],"concepts":[{"id":"https://openalex.org/C11960822","wikidata":"https://www.wikidata.org/wiki/Q242736","display_name":"Phosphorylation","level":2,"score":0.8541955947875977},{"id":"https://openalex.org/C184235292","wikidata":"https://www.wikidata.org/wiki/Q421851","display_name":"Kinase","level":2,"score":0.7201824188232422},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6241333484649658},{"id":"https://openalex.org/C87325107","wikidata":"https://www.wikidata.org/wiki/Q7251493","display_name":"Protein phosphorylation","level":4,"score":0.6228917837142944},{"id":"https://openalex.org/C89611455","wikidata":"https://www.wikidata.org/wiki/Q6804646","display_name":"Mechanism (biology)","level":2,"score":0.5143462419509888},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.5045684576034546},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4749053716659546},{"id":"https://openalex.org/C100631289","wikidata":"https://www.wikidata.org/wiki/Q898362","display_name":"Posttranslational modification","level":3,"score":0.4408296048641205},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.43922650814056396},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4201539158821106},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.38028281927108765},{"id":"https://openalex.org/C97029542","wikidata":"https://www.wikidata.org/wiki/Q281417","display_name":"Protein kinase A","level":3,"score":0.3346711993217468},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.3093186616897583},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.10483351349830627},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010766","descriptor_name":"Phosphorylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010766","descriptor_name":"Phosphorylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010766","descriptor_name":"Phosphorylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011494","descriptor_name":"Protein Kinases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011494","descriptor_name":"Protein Kinases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011494","descriptor_name":"Protein Kinases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D056890","descriptor_name":"Eukaryota","qualifier_ui":"Q000201","qualifier_name":"enzymology","is_major_topic":false},{"descriptor_ui":"D056890","descriptor_name":"Eukaryota","qualifier_ui":"Q000201","qualifier_name":"enzymology","is_major_topic":false},{"descriptor_ui":"D056890","descriptor_name":"Eukaryota","qualifier_ui":"Q000201","qualifier_name":"enzymology","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btr525","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr525","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/21/2927/583531/btr525.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:21926126","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21926126","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.872.7126","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.872.7126","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.oxfordjournals.org/content/early/2011/09/16/bioinformatics.btr525.full.pdf","raw_type":"text"},{"id":"pmh:oai:open-archive.highwire.org:bioinfo:27/21/2927","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/cgi/content/short/27/21/2927","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btr525","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr525","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/21/2927/583531/btr525.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2151031196.pdf","grobid_xml":"https://content.openalex.org/works/W2151031196.grobid-xml"},"referenced_works_count":107,"referenced_works":["https://openalex.org/W176953274","https://openalex.org/W1490238718","https://openalex.org/W1493799579","https://openalex.org/W1570204439","https://openalex.org/W1588644033","https://openalex.org/W1759390037","https://openalex.org/W1930237957","https://openalex.org/W1968000426","https://openalex.org/W1968129408","https://openalex.org/W1977096602","https://openalex.org/W1979111516","https://openalex.org/W1979996176","https://openalex.org/W1984875564","https://openalex.org/W1985085054","https://openalex.org/W1990994212","https://openalex.org/W1991661839","https://openalex.org/W1993141548","https://openalex.org/W1994711268","https://openalex.org/W1995989434","https://openalex.org/W1997882821","https://openalex.org/W1999450178","https://openalex.org/W2000520554","https://openalex.org/W2001183750","https://openalex.org/W2005267401","https://openalex.org/W2006526432","https://openalex.org/W2006595529","https://openalex.org/W2010746883","https://openalex.org/W2022446852","https://openalex.org/W2023389323","https://openalex.org/W2026570544","https://openalex.org/W2030205108","https://openalex.org/W2033238272","https://openalex.org/W2035891030","https://openalex.org/W2035980266","https://openalex.org/W2037531261","https://openalex.org/W2037838449","https://openalex.org/W2038163496","https://openalex.org/W2039577125","https://openalex.org/W2044620987","https://openalex.org/W2046407284","https://openalex.org/W2051147053","https://openalex.org/W2060868346","https://openalex.org/W2062656880","https://openalex.org/W2068181796","https://openalex.org/W2068244478","https://openalex.org/W2073745520","https://openalex.org/W2076573118","https://openalex.org/W2077261875","https://openalex.org/W2078802348","https://openalex.org/W2085037886","https://openalex.org/W2089342580","https://openalex.org/W2089367187","https://openalex.org/W2092908962","https://openalex.org/W2096699854","https://openalex.org/W2097573043","https://openalex.org/W2098583514","https://openalex.org/W2098963498","https://openalex.org/W2099686283","https://openalex.org/W2100283109","https://openalex.org/W2100350770","https://openalex.org/W2100984467","https://openalex.org/W2102025585","https://openalex.org/W2103404876","https://openalex.org/W2103465619","https://openalex.org/W2104002734","https://openalex.org/W2104244040","https://openalex.org/W2107201292","https://openalex.org/W2110149903","https://openalex.org/W2112620000","https://openalex.org/W2114099497","https://openalex.org/W2115149771","https://openalex.org/W2117553655","https://openalex.org/W2117936420","https://openalex.org/W2122664708","https://openalex.org/W2123347941","https://openalex.org/W2123812510","https://openalex.org/W2126101541","https://openalex.org/W2127648442","https://openalex.org/W2128030160","https://openalex.org/W2129913176","https://openalex.org/W2130277691","https://openalex.org/W2132675424","https://openalex.org/W2134129243","https://openalex.org/W2137852592","https://openalex.org/W2138573001","https://openalex.org/W2140184966","https://openalex.org/W2141783940","https://openalex.org/W2142814231","https://openalex.org/W2143076230","https://openalex.org/W2144703932","https://openalex.org/W2144864517","https://openalex.org/W2147054306","https://openalex.org/W2149157501","https://openalex.org/W2150271494","https://openalex.org/W2152632406","https://openalex.org/W2154173127","https://openalex.org/W2154390027","https://openalex.org/W2155239883","https://openalex.org/W2155521690","https://openalex.org/W2162024319","https://openalex.org/W2162172965","https://openalex.org/W2166884712","https://openalex.org/W2167350014","https://openalex.org/W2167865654","https://openalex.org/W2169424993","https://openalex.org/W2418657672","https://openalex.org/W2916483810"],"related_works":["https://openalex.org/W2047183378","https://openalex.org/W1520436089","https://openalex.org/W2410686946","https://openalex.org/W3037320846","https://openalex.org/W2136545008","https://openalex.org/W2916357899","https://openalex.org/W1496052759","https://openalex.org/W2052131670","https://openalex.org/W2088928368","https://openalex.org/W2009657743"],"abstract_inverted_index":{"brett.trost@usask.ca.":[0]},"counts_by_year":[{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":11},{"year":2021,"cited_by_count":8},{"year":2020,"cited_by_count":9},{"year":2019,"cited_by_count":10},{"year":2018,"cited_by_count":12},{"year":2017,"cited_by_count":12},{"year":2016,"cited_by_count":15},{"year":2015,"cited_by_count":21},{"year":2014,"cited_by_count":21},{"year":2013,"cited_by_count":7},{"year":2012,"cited_by_count":12}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
