{"id":"https://openalex.org/W2121472218","doi":"https://doi.org/10.1093/bioinformatics/btr519","title":"Metavir: a web server dedicated to virome analysis","display_name":"Metavir: a web server dedicated to virome analysis","publication_year":2011,"publication_date":"2011-09-11","ids":{"openalex":"https://openalex.org/W2121472218","doi":"https://doi.org/10.1093/bioinformatics/btr519","mag":"2121472218","pmid":"https://pubmed.ncbi.nlm.nih.gov/21911332"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btr519","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr519","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/21/3074/48861885/bioinformatics_27_21_3074.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/27/21/3074/48861885/bioinformatics_27_21_3074.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5013600763","display_name":"Simon Roux","orcid":"https://orcid.org/0000-0002-5831-5895"},"institutions":[{"id":"https://openalex.org/I4210143836","display_name":"Clermont Universit\u00e9","ror":"https://ror.org/03yf5zr20","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210143836"]},{"id":"https://openalex.org/I4210122170","display_name":"Laboratoire Microorganismes G\u00e9nome et Environnement","ror":"https://ror.org/020ahr442","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210107625","https://openalex.org/I4210122170"]},{"id":"https://openalex.org/I198244214","display_name":"Universit\u00e9 Clermont Auvergne","ror":"https://ror.org/01a8ajp46","country_code":"FR","type":"education","lineage":["https://openalex.org/I198244214"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Simon Roux","raw_affiliation_strings":["1 Laboratoire Microorganismes: G\u00e9nome et Environnement, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, BP 10448, F-63000 Clermont-Ferrand, 2CNRS, UMR 6023, LMGE, F-63177 Aubiere and 3Centre R\u00e9gional de Ressources Informatiques, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Clermont-Ferrand, France"],"affiliations":[{"raw_affiliation_string":"1 Laboratoire Microorganismes: G\u00e9nome et Environnement, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, BP 10448, F-63000 Clermont-Ferrand, 2CNRS, UMR 6023, LMGE, F-63177 Aubiere and 3Centre R\u00e9gional de Ressources Informatiques, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Clermont-Ferrand, France","institution_ids":["https://openalex.org/I198244214","https://openalex.org/I4210122170","https://openalex.org/I4210143836","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065254647","display_name":"Micha\u00ebl Faubladier","orcid":null},"institutions":[{"id":"https://openalex.org/I4210122170","display_name":"Laboratoire Microorganismes G\u00e9nome et Environnement","ror":"https://ror.org/020ahr442","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210107625","https://openalex.org/I4210122170"]},{"id":"https://openalex.org/I198244214","display_name":"Universit\u00e9 Clermont Auvergne","ror":"https://ror.org/01a8ajp46","country_code":"FR","type":"education","lineage":["https://openalex.org/I198244214"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210143836","display_name":"Clermont Universit\u00e9","ror":"https://ror.org/03yf5zr20","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210143836"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Micha\u00ebl Faubladier","raw_affiliation_strings":["1 Laboratoire Microorganismes: G\u00e9nome et Environnement, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, BP 10448, F-63000 Clermont-Ferrand, 2CNRS, UMR 6023, LMGE, F-63177 Aubiere and 3Centre R\u00e9gional de Ressources Informatiques, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Clermont-Ferrand, France"],"affiliations":[{"raw_affiliation_string":"1 Laboratoire Microorganismes: G\u00e9nome et Environnement, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, BP 10448, F-63000 Clermont-Ferrand, 2CNRS, UMR 6023, LMGE, F-63177 Aubiere and 3Centre R\u00e9gional de Ressources Informatiques, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Clermont-Ferrand, France","institution_ids":["https://openalex.org/I198244214","https://openalex.org/I4210122170","https://openalex.org/I4210143836","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024684699","display_name":"Antoine Mahul","orcid":"https://orcid.org/0000-0002-9729-1603"},"institutions":[{"id":"https://openalex.org/I4210122170","display_name":"Laboratoire Microorganismes G\u00e9nome et Environnement","ror":"https://ror.org/020ahr442","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210107625","https://openalex.org/I4210122170"]},{"id":"https://openalex.org/I4210143836","display_name":"Clermont Universit\u00e9","ror":"https://ror.org/03yf5zr20","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210143836"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I198244214","display_name":"Universit\u00e9 Clermont Auvergne","ror":"https://ror.org/01a8ajp46","country_code":"FR","type":"education","lineage":["https://openalex.org/I198244214"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Antoine Mahul","raw_affiliation_strings":["1 Laboratoire Microorganismes: G\u00e9nome et Environnement, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, BP 10448, F-63000 Clermont-Ferrand, 2CNRS, UMR 6023, LMGE, F-63177 Aubiere and 3Centre R\u00e9gional de Ressources Informatiques, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Clermont-Ferrand, France"],"affiliations":[{"raw_affiliation_string":"1 Laboratoire Microorganismes: G\u00e9nome et Environnement, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, BP 10448, F-63000 Clermont-Ferrand, 2CNRS, UMR 6023, LMGE, F-63177 Aubiere and 3Centre R\u00e9gional de Ressources Informatiques, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Clermont-Ferrand, France","institution_ids":["https://openalex.org/I198244214","https://openalex.org/I4210122170","https://openalex.org/I4210143836","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090511664","display_name":"Nils Paulhe","orcid":"https://orcid.org/0000-0003-4550-1258"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I198244214","display_name":"Universit\u00e9 Clermont Auvergne","ror":"https://ror.org/01a8ajp46","country_code":"FR","type":"education","lineage":["https://openalex.org/I198244214"]},{"id":"https://openalex.org/I4210122170","display_name":"Laboratoire Microorganismes G\u00e9nome et Environnement","ror":"https://ror.org/020ahr442","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210107625","https://openalex.org/I4210122170"]},{"id":"https://openalex.org/I4210143836","display_name":"Clermont Universit\u00e9","ror":"https://ror.org/03yf5zr20","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210143836"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Nils Paulhe","raw_affiliation_strings":["1 Laboratoire Microorganismes: G\u00e9nome et Environnement, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, BP 10448, F-63000 Clermont-Ferrand, 2CNRS, UMR 6023, LMGE, F-63177 Aubiere and 3Centre R\u00e9gional de Ressources Informatiques, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Clermont-Ferrand, France"],"affiliations":[{"raw_affiliation_string":"1 Laboratoire Microorganismes: G\u00e9nome et Environnement, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, BP 10448, F-63000 Clermont-Ferrand, 2CNRS, UMR 6023, LMGE, F-63177 Aubiere and 3Centre R\u00e9gional de Ressources Informatiques, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Clermont-Ferrand, France","institution_ids":["https://openalex.org/I198244214","https://openalex.org/I4210122170","https://openalex.org/I4210143836","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085879913","display_name":"Aur\u00e9lien Bernard","orcid":"https://orcid.org/0000-0003-1864-5395"},"institutions":[{"id":"https://openalex.org/I198244214","display_name":"Universit\u00e9 Clermont Auvergne","ror":"https://ror.org/01a8ajp46","country_code":"FR","type":"education","lineage":["https://openalex.org/I198244214"]},{"id":"https://openalex.org/I4210143836","display_name":"Clermont Universit\u00e9","ror":"https://ror.org/03yf5zr20","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210143836"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210122170","display_name":"Laboratoire Microorganismes G\u00e9nome et Environnement","ror":"https://ror.org/020ahr442","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210107625","https://openalex.org/I4210122170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Aur\u00e9lien Bernard","raw_affiliation_strings":["1 Laboratoire Microorganismes: G\u00e9nome et Environnement, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, BP 10448, F-63000 Clermont-Ferrand, 2CNRS, UMR 6023, LMGE, F-63177 Aubiere and 3Centre R\u00e9gional de Ressources Informatiques, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Clermont-Ferrand, France"],"affiliations":[{"raw_affiliation_string":"1 Laboratoire Microorganismes: G\u00e9nome et Environnement, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, BP 10448, F-63000 Clermont-Ferrand, 2CNRS, UMR 6023, LMGE, F-63177 Aubiere and 3Centre R\u00e9gional de Ressources Informatiques, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Clermont-Ferrand, France","institution_ids":["https://openalex.org/I198244214","https://openalex.org/I4210122170","https://openalex.org/I4210143836","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007789955","display_name":"Didier Debroas","orcid":"https://orcid.org/0000-0002-9915-1268"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I198244214","display_name":"Universit\u00e9 Clermont Auvergne","ror":"https://ror.org/01a8ajp46","country_code":"FR","type":"education","lineage":["https://openalex.org/I198244214"]},{"id":"https://openalex.org/I4210122170","display_name":"Laboratoire Microorganismes G\u00e9nome et Environnement","ror":"https://ror.org/020ahr442","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210107625","https://openalex.org/I4210122170"]},{"id":"https://openalex.org/I4210143836","display_name":"Clermont Universit\u00e9","ror":"https://ror.org/03yf5zr20","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210143836"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Didier Debroas","raw_affiliation_strings":["1 Laboratoire Microorganismes: G\u00e9nome et Environnement, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, BP 10448, F-63000 Clermont-Ferrand, 2CNRS, UMR 6023, LMGE, F-63177 Aubiere and 3Centre R\u00e9gional de Ressources Informatiques, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Clermont-Ferrand, France"],"affiliations":[{"raw_affiliation_string":"1 Laboratoire Microorganismes: G\u00e9nome et Environnement, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, BP 10448, F-63000 Clermont-Ferrand, 2CNRS, UMR 6023, LMGE, F-63177 Aubiere and 3Centre R\u00e9gional de Ressources Informatiques, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Clermont-Ferrand, France","institution_ids":["https://openalex.org/I198244214","https://openalex.org/I4210122170","https://openalex.org/I4210143836","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040348570","display_name":"Fran\u00e7ois Enault","orcid":"https://orcid.org/0000-0002-4968-3995"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210122170","display_name":"Laboratoire Microorganismes G\u00e9nome et Environnement","ror":"https://ror.org/020ahr442","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210107625","https://openalex.org/I4210122170"]},{"id":"https://openalex.org/I4210143836","display_name":"Clermont Universit\u00e9","ror":"https://ror.org/03yf5zr20","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210143836"]},{"id":"https://openalex.org/I198244214","display_name":"Universit\u00e9 Clermont Auvergne","ror":"https://ror.org/01a8ajp46","country_code":"FR","type":"education","lineage":["https://openalex.org/I198244214"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Fran\u00e7ois Enault","raw_affiliation_strings":["1 Laboratoire Microorganismes: G\u00e9nome et Environnement, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, BP 10448, F-63000 Clermont-Ferrand, 2CNRS, UMR 6023, LMGE, F-63177 Aubiere and 3Centre R\u00e9gional de Ressources Informatiques, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Clermont-Ferrand, France"],"affiliations":[{"raw_affiliation_string":"1 Laboratoire Microorganismes: G\u00e9nome et Environnement, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, BP 10448, F-63000 Clermont-Ferrand, 2CNRS, UMR 6023, LMGE, F-63177 Aubiere and 3Centre R\u00e9gional de Ressources Informatiques, Clermont Universit\u00e9, Universit\u00e9 Blaise Pascal, Clermont-Ferrand, France","institution_ids":["https://openalex.org/I198244214","https://openalex.org/I4210122170","https://openalex.org/I4210143836","https://openalex.org/I1294671590"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5013600763"],"corresponding_institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I198244214","https://openalex.org/I4210122170","https://openalex.org/I4210143836"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":12.1133,"has_fulltext":false,"cited_by_count":158,"citation_normalized_percentile":{"value":0.99006328,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"27","issue":"21","first_page":"3074","last_page":"3075"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10494","display_name":"Plant Virus Research Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11688","display_name":"Microbial infections and disease research","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/human-virome","display_name":"Human virome","score":0.9342372417449951},{"id":"https://openalex.org/keywords/sequence-analysis","display_name":"Sequence analysis","score":0.5559583902359009},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.5426036715507507},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5336440801620483},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5011160373687744},{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.4839804172515869},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.44707056879997253},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.36345160007476807},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.25263625383377075},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.2454257309436798},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.21957877278327942},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.16510388255119324}],"concepts":[{"id":"https://openalex.org/C190743605","wikidata":"https://www.wikidata.org/wiki/Q17027885","display_name":"Human virome","level":4,"score":0.9342372417449951},{"id":"https://openalex.org/C61053724","wikidata":"https://www.wikidata.org/wiki/Q1154615","display_name":"Sequence analysis","level":3,"score":0.5559583902359009},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.5426036715507507},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5336440801620483},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5011160373687744},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.4839804172515869},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.44707056879997253},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.36345160007476807},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.25263625383377075},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.2454257309436798},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.21957877278327942},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.16510388255119324}],"mesh":[{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D016679","descriptor_name":"Genome, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016679","descriptor_name":"Genome, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016679","descriptor_name":"Genome, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btr519","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr519","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/21/3074/48861885/bioinformatics_27_21_3074.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:21911332","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21911332","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:HAL:hal-00841495v1","is_oa":false,"landing_page_url":"https://hal.science/hal-00841495","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2011, 27 (21), pp.3074-5. ⟨10.1093/bioinformatics/btr519⟩","raw_type":"Journal articles"},{"id":"pmh:oai:open-archive.highwire.org:bioinfo:27/21/3074","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/cgi/content/short/27/21/3074","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btr519","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr519","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/21/3074/48861885/bioinformatics_27_21_3074.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2121472218.pdf","grobid_xml":"https://content.openalex.org/works/W2121472218.grobid-xml"},"referenced_works_count":21,"referenced_works":["https://openalex.org/W113427216","https://openalex.org/W1519266993","https://openalex.org/W1552724685","https://openalex.org/W1832083778","https://openalex.org/W1989348205","https://openalex.org/W2013195700","https://openalex.org/W2037532428","https://openalex.org/W2042893247","https://openalex.org/W2049094395","https://openalex.org/W2052201484","https://openalex.org/W2084203472","https://openalex.org/W2085083155","https://openalex.org/W2101831420","https://openalex.org/W2124351063","https://openalex.org/W2133707124","https://openalex.org/W2145009248","https://openalex.org/W2151831732","https://openalex.org/W2159957100","https://openalex.org/W2166265186","https://openalex.org/W2914037595","https://openalex.org/W4239871258"],"related_works":["https://openalex.org/W4297154044","https://openalex.org/W2519363532","https://openalex.org/W3182597671","https://openalex.org/W4391986707","https://openalex.org/W4220807255","https://openalex.org/W4313305812","https://openalex.org/W3216950677","https://openalex.org/W4293040420","https://openalex.org/W2289294330","https://openalex.org/W3133222449"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":9},{"year":2020,"cited_by_count":11},{"year":2019,"cited_by_count":10},{"year":2018,"cited_by_count":20},{"year":2017,"cited_by_count":17},{"year":2016,"cited_by_count":19},{"year":2015,"cited_by_count":18},{"year":2014,"cited_by_count":21},{"year":2013,"cited_by_count":10},{"year":2012,"cited_by_count":8}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}