{"id":"https://openalex.org/W2155295585","doi":"https://doi.org/10.1093/bioinformatics/btr463","title":"Inferring disease and gene set associations with rank coherence in networks","display_name":"Inferring disease and gene set associations with rank coherence in networks","publication_year":2011,"publication_date":"2011-08-08","ids":{"openalex":"https://openalex.org/W2155295585","doi":"https://doi.org/10.1093/bioinformatics/btr463","mag":"2155295585","pmid":"https://pubmed.ncbi.nlm.nih.gov/21824970"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btr463","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr463","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/19/2692/48865661/bioinformatics_27_19_2692.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/27/19/2692/48865661/bioinformatics_27_19_2692.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5111542772","display_name":"Tae-Hyun Hwang","orcid":null},"institutions":[{"id":"https://openalex.org/I205237279","display_name":"Nankai University","ror":"https://ror.org/01y1kjr75","country_code":"CN","type":"education","lineage":["https://openalex.org/I205237279"]},{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]}],"countries":["CN","US"],"is_corresponding":true,"raw_author_name":"TaeHyun Hwang","raw_affiliation_strings":["1 Department of Computer Science and Engineering, University of Minnesota Twin Cities, Minneapolis, MN 55455, USA, 2College of Software, Nankai University, Tianjin, China and 3Department of Bioinformatics and Computational Biology, Genentech Inc., South San Francisco, CA 94080, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science and Engineering, University of Minnesota Twin Cities, Minneapolis, MN 55455, USA, 2College of Software, Nankai University, Tianjin, China and 3Department of Bioinformatics and Computational Biology, Genentech Inc., South San Francisco, CA 94080, USA","institution_ids":["https://openalex.org/I205237279","https://openalex.org/I130238516"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100441789","display_name":"Wei Zhang","orcid":"https://orcid.org/0000-0003-3605-9373"},"institutions":[{"id":"https://openalex.org/I205237279","display_name":"Nankai University","ror":"https://ror.org/01y1kjr75","country_code":"CN","type":"education","lineage":["https://openalex.org/I205237279"]},{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Wei Zhang","raw_affiliation_strings":["1 Department of Computer Science and Engineering, University of Minnesota Twin Cities, Minneapolis, MN 55455, USA, 2College of Software, Nankai University, Tianjin, China and 3Department of Bioinformatics and Computational Biology, Genentech Inc., South San Francisco, CA 94080, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science and Engineering, University of Minnesota Twin Cities, Minneapolis, MN 55455, USA, 2College of Software, Nankai University, Tianjin, China and 3Department of Bioinformatics and Computational Biology, Genentech Inc., South San Francisco, CA 94080, USA","institution_ids":["https://openalex.org/I205237279","https://openalex.org/I130238516"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101644877","display_name":"Maoqiang Xie","orcid":"https://orcid.org/0000-0002-6335-5744"},"institutions":[{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]},{"id":"https://openalex.org/I205237279","display_name":"Nankai University","ror":"https://ror.org/01y1kjr75","country_code":"CN","type":"education","lineage":["https://openalex.org/I205237279"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Maoqiang Xie","raw_affiliation_strings":["1 Department of Computer Science and Engineering, University of Minnesota Twin Cities, Minneapolis, MN 55455, USA, 2College of Software, Nankai University, Tianjin, China and 3Department of Bioinformatics and Computational Biology, Genentech Inc., South San Francisco, CA 94080, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science and Engineering, University of Minnesota Twin Cities, Minneapolis, MN 55455, USA, 2College of Software, Nankai University, Tianjin, China and 3Department of Bioinformatics and Computational Biology, Genentech Inc., South San Francisco, CA 94080, USA","institution_ids":["https://openalex.org/I205237279","https://openalex.org/I130238516"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100424761","display_name":"Jinfeng Liu","orcid":"https://orcid.org/0000-0002-0343-8222"},"institutions":[{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]},{"id":"https://openalex.org/I205237279","display_name":"Nankai University","ror":"https://ror.org/01y1kjr75","country_code":"CN","type":"education","lineage":["https://openalex.org/I205237279"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Jinfeng Liu","raw_affiliation_strings":["1 Department of Computer Science and Engineering, University of Minnesota Twin Cities, Minneapolis, MN 55455, USA, 2College of Software, Nankai University, Tianjin, China and 3Department of Bioinformatics and Computational Biology, Genentech Inc., South San Francisco, CA 94080, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science and Engineering, University of Minnesota Twin Cities, Minneapolis, MN 55455, USA, 2College of Software, Nankai University, Tianjin, China and 3Department of Bioinformatics and Computational Biology, Genentech Inc., South San Francisco, CA 94080, USA","institution_ids":["https://openalex.org/I205237279","https://openalex.org/I130238516"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066338313","display_name":"Rui Kuang","orcid":"https://orcid.org/0000-0002-4916-903X"},"institutions":[{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]},{"id":"https://openalex.org/I205237279","display_name":"Nankai University","ror":"https://ror.org/01y1kjr75","country_code":"CN","type":"education","lineage":["https://openalex.org/I205237279"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Rui Kuang","raw_affiliation_strings":["1 Department of Computer Science and Engineering, University of Minnesota Twin Cities, Minneapolis, MN 55455, USA, 2College of Software, Nankai University, Tianjin, China and 3Department of Bioinformatics and Computational Biology, Genentech Inc., South San Francisco, CA 94080, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Computer Science and Engineering, University of Minnesota Twin Cities, Minneapolis, MN 55455, USA, 2College of Software, Nankai University, Tianjin, China and 3Department of Bioinformatics and Computational Biology, Genentech Inc., South San Francisco, CA 94080, USA","institution_ids":["https://openalex.org/I205237279","https://openalex.org/I130238516"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5111542772"],"corresponding_institution_ids":["https://openalex.org/I130238516","https://openalex.org/I205237279"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":3.0681,"has_fulltext":true,"cited_by_count":39,"citation_normalized_percentile":{"value":0.92204648,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"27","issue":"19","first_page":"2692","last_page":"2699"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.9944000244140625,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/omim-online-mendelian-inheritance-in-man","display_name":"OMIM : Online Mendelian Inheritance in Man","score":0.7078945636749268},{"id":"https://openalex.org/keywords/candidate-gene","display_name":"Candidate gene","score":0.649258553981781},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5334537029266357},{"id":"https://openalex.org/keywords/genome-wide-association-study","display_name":"Genome-wide association study","score":0.5044487714767456},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4651326537132263},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4425501525402069},{"id":"https://openalex.org/keywords/phenotype","display_name":"Phenotype","score":0.4368568956851959},{"id":"https://openalex.org/keywords/gene-interaction","display_name":"Gene interaction","score":0.42744994163513184},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.42050081491470337},{"id":"https://openalex.org/keywords/genetic-association","display_name":"Genetic association","score":0.41145655512809753},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.41053932905197144},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.40320008993148804},{"id":"https://openalex.org/keywords/single-nucleotide-polymorphism","display_name":"Single-nucleotide polymorphism","score":0.2652707099914551},{"id":"https://openalex.org/keywords/genotype","display_name":"Genotype","score":0.13868296146392822},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.08533954620361328}],"concepts":[{"id":"https://openalex.org/C191791410","wikidata":"https://www.wikidata.org/wiki/Q241953","display_name":"OMIM : Online Mendelian Inheritance in Man","level":4,"score":0.7078945636749268},{"id":"https://openalex.org/C69991583","wikidata":"https://www.wikidata.org/wiki/Q1423575","display_name":"Candidate gene","level":3,"score":0.649258553981781},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5334537029266357},{"id":"https://openalex.org/C106208931","wikidata":"https://www.wikidata.org/wiki/Q1098876","display_name":"Genome-wide association study","level":5,"score":0.5044487714767456},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4651326537132263},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4425501525402069},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.4368568956851959},{"id":"https://openalex.org/C2991772755","wikidata":"https://www.wikidata.org/wiki/Q751748","display_name":"Gene interaction","level":3,"score":0.42744994163513184},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.42050081491470337},{"id":"https://openalex.org/C186413461","wikidata":"https://www.wikidata.org/wiki/Q744727","display_name":"Genetic association","level":5,"score":0.41145655512809753},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.41053932905197144},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.40320008993148804},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.2652707099914551},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.13868296146392822},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.08533954620361328},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1093/bioinformatics/btr463","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr463","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/19/2692/48865661/bioinformatics_27_19_2692.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:21824970","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21824970","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.402.825","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.402.825","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.cs.umn.edu/tech_reports_upload/tr2011/11-002.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.743.1911","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.743.1911","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://arxiv.org/pdf/1102.3919.pdf","raw_type":"text"},{"id":"pmh:oai:conservancy.umn.edu:11299/215849","is_oa":false,"landing_page_url":"http://hdl.handle.net/11299/215849","pdf_url":null,"source":{"id":"https://openalex.org/S4306402521","display_name":"University of Minnesota Digital Conservancy (University of Minnesota)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I130238516","host_organization_name":"University of Minnesota","host_organization_lineage":["https://openalex.org/I130238516"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Report"},{"id":"pmh:oai:open-archive.highwire.org:bioinfo:27/19/2692","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/cgi/content/short/27/19/2692","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btr463","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr463","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/19/2692/48865661/bioinformatics_27_19_2692.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","score":0.4000000059604645,"id":"https://metadata.un.org/sdg/17"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320309636","display_name":"University of Minnesota","ror":"https://ror.org/03grvy078"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2155295585.pdf","grobid_xml":"https://content.openalex.org/works/W2155295585.grobid-xml"},"referenced_works_count":30,"referenced_works":["https://openalex.org/W61101988","https://openalex.org/W1981637710","https://openalex.org/W1998096683","https://openalex.org/W2014469644","https://openalex.org/W2038122249","https://openalex.org/W2067284134","https://openalex.org/W2070412833","https://openalex.org/W2083045667","https://openalex.org/W2095956310","https://openalex.org/W2097498614","https://openalex.org/W2100582962","https://openalex.org/W2107751484","https://openalex.org/W2117446594","https://openalex.org/W2119220491","https://openalex.org/W2122769974","https://openalex.org/W2123699903","https://openalex.org/W2130410032","https://openalex.org/W2130962401","https://openalex.org/W2134672568","https://openalex.org/W2134783591","https://openalex.org/W2137518425","https://openalex.org/W2153056550","https://openalex.org/W2154455818","https://openalex.org/W2154654747","https://openalex.org/W2154947819","https://openalex.org/W2158217645","https://openalex.org/W2170989872","https://openalex.org/W3151142710","https://openalex.org/W6602404826","https://openalex.org/W6682494755"],"related_works":["https://openalex.org/W3103888630","https://openalex.org/W1971424770","https://openalex.org/W3042542048","https://openalex.org/W3132065130","https://openalex.org/W2111842731","https://openalex.org/W2066467839","https://openalex.org/W2594299395","https://openalex.org/W2771541573","https://openalex.org/W2765794416","https://openalex.org/W1486217206"],"abstract_inverted_index":{"kuang@cs.umn.edu.":[0]},"counts_by_year":[{"year":2021,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":10},{"year":2013,"cited_by_count":8},{"year":2012,"cited_by_count":5}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}