{"id":"https://openalex.org/W1993934436","doi":"https://doi.org/10.1093/bioinformatics/btr433","title":"Dasty3, a WEB framework for DAS","display_name":"Dasty3, a WEB framework for DAS","publication_year":2011,"publication_date":"2011-07-28","ids":{"openalex":"https://openalex.org/W1993934436","doi":"https://doi.org/10.1093/bioinformatics/btr433","mag":"1993934436","pmid":"https://pubmed.ncbi.nlm.nih.gov/21798964"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btr433","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr433","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/18/2616/438532/btr433.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/27/18/2616/438532/btr433.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5108501528","display_name":"Jos\u00e9 Villaveces","orcid":null},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]},{"id":"https://openalex.org/I79620101","display_name":"University of Arkansas for Medical Sciences","ror":"https://ror.org/00xcryt71","country_code":"US","type":"education","lineage":["https://openalex.org/I79620101"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES","GB","US","ZA"],"is_corresponding":false,"raw_author_name":"Jose M. Villaveces","raw_affiliation_strings":["1 Protein and Nucleotide Data Group, EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK, 2Computational Biology Group, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, South Africa, 3Software Department, UPC\u2212BarcelonaTech, Barcelona, Spain and 4Biomedical Informatics department, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Protein and Nucleotide Data Group, EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK, 2Computational Biology Group, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, South Africa, 3Software Department, UPC\u2212BarcelonaTech, Barcelona, Spain and 4Biomedical Informatics department, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA","institution_ids":["https://openalex.org/I157614274","https://openalex.org/I79620101","https://openalex.org/I9617848","https://openalex.org/I87048295","https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056920611","display_name":"Rafael C. Jim\u00e9nez","orcid":"https://orcid.org/0000-0001-5404-7670"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]},{"id":"https://openalex.org/I79620101","display_name":"University of Arkansas for Medical Sciences","ror":"https://ror.org/00xcryt71","country_code":"US","type":"education","lineage":["https://openalex.org/I79620101"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES","GB","US","ZA"],"is_corresponding":false,"raw_author_name":"Rafael C. Jimenez","raw_affiliation_strings":["1 Protein and Nucleotide Data Group, EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK, 2Computational Biology Group, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, South Africa, 3Software Department, UPC\u2212BarcelonaTech, Barcelona, Spain and 4Biomedical Informatics department, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Protein and Nucleotide Data Group, EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK, 2Computational Biology Group, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, South Africa, 3Software Department, UPC\u2212BarcelonaTech, Barcelona, Spain and 4Biomedical Informatics department, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA","institution_ids":["https://openalex.org/I157614274","https://openalex.org/I79620101","https://openalex.org/I9617848","https://openalex.org/I87048295","https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053160264","display_name":"Leyla Jael Castro","orcid":"https://orcid.org/0000-0003-3986-0510"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]},{"id":"https://openalex.org/I79620101","display_name":"University of Arkansas for Medical Sciences","ror":"https://ror.org/00xcryt71","country_code":"US","type":"education","lineage":["https://openalex.org/I79620101"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES","GB","US","ZA"],"is_corresponding":false,"raw_author_name":"Leyla J. Garcia","raw_affiliation_strings":["1 Protein and Nucleotide Data Group, EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK, 2Computational Biology Group, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, South Africa, 3Software Department, UPC\u2212BarcelonaTech, Barcelona, Spain and 4Biomedical Informatics department, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Protein and Nucleotide Data Group, EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK, 2Computational Biology Group, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, South Africa, 3Software Department, UPC\u2212BarcelonaTech, Barcelona, Spain and 4Biomedical Informatics department, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA","institution_ids":["https://openalex.org/I157614274","https://openalex.org/I79620101","https://openalex.org/I9617848","https://openalex.org/I87048295","https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019704465","display_name":"Gustavo A Salazar","orcid":"https://orcid.org/0000-0001-9208-4966"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]},{"id":"https://openalex.org/I79620101","display_name":"University of Arkansas for Medical Sciences","ror":"https://ror.org/00xcryt71","country_code":"US","type":"education","lineage":["https://openalex.org/I79620101"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES","GB","US","ZA"],"is_corresponding":false,"raw_author_name":"Gustavo A. Salazar","raw_affiliation_strings":["1 Protein and Nucleotide Data Group, EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK, 2Computational Biology Group, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, South Africa, 3Software Department, UPC\u2212BarcelonaTech, Barcelona, Spain and 4Biomedical Informatics department, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Protein and Nucleotide Data Group, EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK, 2Computational Biology Group, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, South Africa, 3Software Department, UPC\u2212BarcelonaTech, Barcelona, Spain and 4Biomedical Informatics department, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA","institution_ids":["https://openalex.org/I157614274","https://openalex.org/I79620101","https://openalex.org/I9617848","https://openalex.org/I87048295","https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046399679","display_name":"Bernat Gel","orcid":"https://orcid.org/0000-0001-8878-349X"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]},{"id":"https://openalex.org/I79620101","display_name":"University of Arkansas for Medical Sciences","ror":"https://ror.org/00xcryt71","country_code":"US","type":"education","lineage":["https://openalex.org/I79620101"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES","GB","US","ZA"],"is_corresponding":false,"raw_author_name":"Bernat Gel","raw_affiliation_strings":["1 Protein and Nucleotide Data Group, EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK, 2Computational Biology Group, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, South Africa, 3Software Department, UPC\u2212BarcelonaTech, Barcelona, Spain and 4Biomedical Informatics department, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Protein and Nucleotide Data Group, EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK, 2Computational Biology Group, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, South Africa, 3Software Department, UPC\u2212BarcelonaTech, Barcelona, Spain and 4Biomedical Informatics department, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA","institution_ids":["https://openalex.org/I157614274","https://openalex.org/I79620101","https://openalex.org/I9617848","https://openalex.org/I87048295","https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080377820","display_name":"Nicola Mulder","orcid":"https://orcid.org/0000-0003-4905-0941"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]},{"id":"https://openalex.org/I79620101","display_name":"University of Arkansas for Medical Sciences","ror":"https://ror.org/00xcryt71","country_code":"US","type":"education","lineage":["https://openalex.org/I79620101"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES","GB","US","ZA"],"is_corresponding":false,"raw_author_name":"Nicola Mulder","raw_affiliation_strings":["1 Protein and Nucleotide Data Group, EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK, 2Computational Biology Group, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, South Africa, 3Software Department, UPC\u2212BarcelonaTech, Barcelona, Spain and 4Biomedical Informatics department, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Protein and Nucleotide Data Group, EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK, 2Computational Biology Group, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, South Africa, 3Software Department, UPC\u2212BarcelonaTech, Barcelona, Spain and 4Biomedical Informatics department, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA","institution_ids":["https://openalex.org/I157614274","https://openalex.org/I79620101","https://openalex.org/I9617848","https://openalex.org/I87048295","https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071535801","display_name":"Mar\u00eda Martin","orcid":"https://orcid.org/0000-0001-5454-2815"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]},{"id":"https://openalex.org/I79620101","display_name":"University of Arkansas for Medical Sciences","ror":"https://ror.org/00xcryt71","country_code":"US","type":"education","lineage":["https://openalex.org/I79620101"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES","GB","US","ZA"],"is_corresponding":false,"raw_author_name":"Maria Martin","raw_affiliation_strings":["1 Protein and Nucleotide Data Group, EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK, 2Computational Biology Group, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, South Africa, 3Software Department, UPC\u2212BarcelonaTech, Barcelona, Spain and 4Biomedical Informatics department, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Protein and Nucleotide Data Group, EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK, 2Computational Biology Group, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, South Africa, 3Software Department, UPC\u2212BarcelonaTech, Barcelona, Spain and 4Biomedical Informatics department, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA","institution_ids":["https://openalex.org/I157614274","https://openalex.org/I79620101","https://openalex.org/I9617848","https://openalex.org/I87048295","https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023349079","display_name":"Alexander Garc\u00eda","orcid":"https://orcid.org/0000-0003-1238-2539"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]},{"id":"https://openalex.org/I79620101","display_name":"University of Arkansas for Medical Sciences","ror":"https://ror.org/00xcryt71","country_code":"US","type":"education","lineage":["https://openalex.org/I79620101"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES","GB","US","ZA"],"is_corresponding":false,"raw_author_name":"Alexander Garcia","raw_affiliation_strings":["1 Protein and Nucleotide Data Group, EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK, 2Computational Biology Group, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, South Africa, 3Software Department, UPC\u2212BarcelonaTech, Barcelona, Spain and 4Biomedical Informatics department, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Protein and Nucleotide Data Group, EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK, 2Computational Biology Group, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, South Africa, 3Software Department, UPC\u2212BarcelonaTech, Barcelona, Spain and 4Biomedical Informatics department, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA","institution_ids":["https://openalex.org/I157614274","https://openalex.org/I79620101","https://openalex.org/I9617848","https://openalex.org/I87048295","https://openalex.org/I1303153112"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066783652","display_name":"Henning Hermjakob","orcid":"https://orcid.org/0000-0001-8479-0262"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]},{"id":"https://openalex.org/I79620101","display_name":"University of Arkansas for Medical Sciences","ror":"https://ror.org/00xcryt71","country_code":"US","type":"education","lineage":["https://openalex.org/I79620101"]},{"id":"https://openalex.org/I87048295","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I87048295"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES","GB","US","ZA"],"is_corresponding":true,"raw_author_name":"Henning Hermjakob","raw_affiliation_strings":["1 Protein and Nucleotide Data Group, EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK, 2Computational Biology Group, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, South Africa, 3Software Department, UPC\u2212BarcelonaTech, Barcelona, Spain and 4Biomedical Informatics department, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Protein and Nucleotide Data Group, EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK, 2Computational Biology Group, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, South Africa, 3Software Department, UPC\u2212BarcelonaTech, Barcelona, Spain and 4Biomedical Informatics department, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA","institution_ids":["https://openalex.org/I157614274","https://openalex.org/I79620101","https://openalex.org/I9617848","https://openalex.org/I87048295","https://openalex.org/I1303153112"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5066783652"],"corresponding_institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I157614274","https://openalex.org/I79620101","https://openalex.org/I87048295","https://openalex.org/I9617848"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":9.5783,"has_fulltext":true,"cited_by_count":15,"citation_normalized_percentile":{"value":0.97395073,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"27","issue":"18","first_page":"2616","last_page":"2617"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.07010000199079514,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.07010000199079514,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T13523","display_name":"Mathematics, Computing, and Information Processing","score":0.03240000084042549,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.02969999983906746,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8058857917785645},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.7854045629501343},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.7089722752571106},{"id":"https://openalex.org/keywords/license","display_name":"License","score":0.6976097226142883},{"id":"https://openalex.org/keywords/open-source","display_name":"Open source","score":0.6833759546279907},{"id":"https://openalex.org/keywords/application-programming-interface","display_name":"Application programming interface","score":0.6828930974006653},{"id":"https://openalex.org/keywords/mit-license","display_name":"MIT License","score":0.6659661531448364},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.645448625087738},{"id":"https://openalex.org/keywords/protocol","display_name":"Protocol (science)","score":0.6165677309036255},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.5634164214134216},{"id":"https://openalex.org/keywords/extensibility","display_name":"Extensibility","score":0.557266354560852},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.5252510905265808},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.45256665349006653},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.3779311776161194},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.357136070728302},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3385615348815918},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.2833760976791382},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.2041921615600586},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.09097477793693542}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8058857917785645},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.7854045629501343},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.7089722752571106},{"id":"https://openalex.org/C2780560020","wikidata":"https://www.wikidata.org/wiki/Q79719","display_name":"License","level":2,"score":0.6976097226142883},{"id":"https://openalex.org/C3018397939","wikidata":"https://www.wikidata.org/wiki/Q3644502","display_name":"Open source","level":3,"score":0.6833759546279907},{"id":"https://openalex.org/C99613125","wikidata":"https://www.wikidata.org/wiki/Q165194","display_name":"Application programming interface","level":2,"score":0.6828930974006653},{"id":"https://openalex.org/C174183944","wikidata":"https://www.wikidata.org/wiki/Q334661","display_name":"MIT License","level":3,"score":0.6659661531448364},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.645448625087738},{"id":"https://openalex.org/C2780385302","wikidata":"https://www.wikidata.org/wiki/Q367158","display_name":"Protocol (science)","level":3,"score":0.6165677309036255},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.5634164214134216},{"id":"https://openalex.org/C32833848","wikidata":"https://www.wikidata.org/wiki/Q4115054","display_name":"Extensibility","level":2,"score":0.557266354560852},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.5252510905265808},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.45256665349006653},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.3779311776161194},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.357136070728302},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3385615348815918},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.2833760976791382},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.2041921615600586},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.09097477793693542},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C204787440","wikidata":"https://www.wikidata.org/wiki/Q188504","display_name":"Alternative medicine","level":2,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D012042","descriptor_name":"Registries","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012042","descriptor_name":"Registries","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012042","descriptor_name":"Registries","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/btr433","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr433","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/18/2616/438532/btr433.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:21798964","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21798964","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.955.2140","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.955.2140","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.oxfordjournals.org/content/early/2011/07/27/bioinformatics.btr433.full.pdf","raw_type":"text"},{"id":"pmh:oai:europepmc.org:2174533","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3167052","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:open-archive.highwire.org:bioinfo:27/18/2616","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/cgi/content/short/27/18/2616","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btr433","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr433","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/18/2616/438532/btr433.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17","score":0.4099999964237213}],"awards":[{"id":"https://openalex.org/G6519275499","display_name":null,"funder_award_id":"HHSN268201000035C","funder_id":"https://openalex.org/F4320337338","funder_display_name":"National Heart, Lung, and Blood Institute"},{"id":"https://openalex.org/G7321198273","display_name":null,"funder_award_id":"HHSN268201000035C","funder_id":"https://openalex.org/F4320332505","funder_display_name":"U.S. Public Health Service"},{"id":"https://openalex.org/G8071364432","display_name":"Apoptosis systems biology applied to cancer and AIDS. An integrated approach of experimental biology, data mining, mathematical modelling, biostatistics, systems engineering and molecular medicine","funder_award_id":"200767","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320332505","display_name":"U.S. Public Health Service","ror":"https://ror.org/05xf94514"},{"id":"https://openalex.org/F4320337338","display_name":"National Heart, Lung, and Blood Institute","ror":"https://ror.org/012pb6c26"},{"id":"https://openalex.org/F4320338377","display_name":"FP7 Health","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1993934436.pdf","grobid_xml":"https://content.openalex.org/works/W1993934436.grobid-xml"},"referenced_works_count":7,"referenced_works":["https://openalex.org/W1980160222","https://openalex.org/W1998671175","https://openalex.org/W2088911276","https://openalex.org/W2105644689","https://openalex.org/W2113535342","https://openalex.org/W2154519319","https://openalex.org/W2164940334"],"related_works":["https://openalex.org/W4309247532","https://openalex.org/W632256878","https://openalex.org/W4211197663","https://openalex.org/W2491403535","https://openalex.org/W2479811461","https://openalex.org/W2113128227","https://openalex.org/W3096946169","https://openalex.org/W2104915799","https://openalex.org/W4311938462","https://openalex.org/W3123068371"],"abstract_inverted_index":{"MOTIVATION:":[0],"Dasty3":[1,44,61],"is":[2,20,53,62],"a":[3,12],"highly":[4],"interactive":[5],"and":[6,52,80],"extensible":[7],"Web-based":[8,50],"framework.":[9],"It":[10],"provides":[11,45],"rich":[13],"Application":[14],"Programming":[15],"Interface":[16],"upon":[17],"which":[18],"it":[19],"possible":[21],"to":[22],"develop":[23],"specialized":[24],"clients":[25],"capable":[26],"of":[27,73],"retrieving":[28],"information":[29],"from":[30,36],"DAS":[31,42,58],"sources":[32],"as":[33,35],"well":[34],"data":[37],"providers":[38],"not":[39],"using":[40,55],"the":[41,56,71,74],"protocol.":[43],"significant":[46],"improvements":[47],"on":[48],"previous":[49],"frameworks":[51],"implemented":[54],"1.6":[57],"specification.":[59],"AVAILABILITY:":[60],"an":[63],"open-source":[64],"tool":[65],"freely":[66],"available":[67],"at":[68,85],"http://www.ebi.ac.uk/dasty/":[69],"under":[70],"terms":[72],"GNU":[75],"General":[76],"public":[77],"license.":[78],"Source":[79],"documentation":[81],"can":[82],"be":[83],"found":[84],"http://code.google.com/p/dasty/.":[86],"CONTACT:":[87],"hhe@ebi.ac.uk.":[88]},"counts_by_year":[{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":7},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":2}],"updated_date":"2026-06-23T06:36:01.041984","created_date":"2025-10-10T00:00:00"}
