{"id":"https://openalex.org/W2096092072","doi":"https://doi.org/10.1093/bioinformatics/btr391","title":"Integration and visualization of host\u2013pathogen data related to infectious diseases","display_name":"Integration and visualization of host\u2013pathogen data related to infectious diseases","publication_year":2011,"publication_date":"2011-06-27","ids":{"openalex":"https://openalex.org/W2096092072","doi":"https://doi.org/10.1093/bioinformatics/btr391","mag":"2096092072","pmid":"https://pubmed.ncbi.nlm.nih.gov/21712250"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btr391","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr391","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/16/2279/48864337/bioinformatics_27_16_2279.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/27/16/2279/48864337/bioinformatics_27_16_2279.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5090212849","display_name":"Timothy Driscoll","orcid":"https://orcid.org/0000-0002-5119-0372"},"institutions":[{"id":"https://openalex.org/I4210092658","display_name":"Harvard\u2013MIT Division of Health Sciences and Technology","ror":"https://ror.org/00jjeh629","country_code":"US","type":"education","lineage":["https://openalex.org/I4210092658"]},{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Timothy Driscoll","raw_affiliation_strings":["1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA 24061 and 2Children's Hospital Informatics Program, Harvard-MIT Division of Health Sciences and Technology, Boston, MA 02115, USA"],"affiliations":[{"raw_affiliation_string":"1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA 24061 and 2Children's Hospital Informatics Program, Harvard-MIT Division of Health Sciences and Technology, Boston, MA 02115, USA","institution_ids":["https://openalex.org/I859038795","https://openalex.org/I4210092658"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008584137","display_name":"Joseph L. Gabbard","orcid":"https://orcid.org/0000-0002-7488-676X"},"institutions":[{"id":"https://openalex.org/I4210092658","display_name":"Harvard\u2013MIT Division of Health Sciences and Technology","ror":"https://ror.org/00jjeh629","country_code":"US","type":"education","lineage":["https://openalex.org/I4210092658"]},{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joseph L. Gabbard","raw_affiliation_strings":["1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA 24061 and 2Children's Hospital Informatics Program, Harvard-MIT Division of Health Sciences and Technology, Boston, MA 02115, USA"],"affiliations":[{"raw_affiliation_string":"1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA 24061 and 2Children's Hospital Informatics Program, Harvard-MIT Division of Health Sciences and Technology, Boston, MA 02115, USA","institution_ids":["https://openalex.org/I859038795","https://openalex.org/I4210092658"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108387571","display_name":"Chunhong Mao","orcid":null},"institutions":[{"id":"https://openalex.org/I4210092658","display_name":"Harvard\u2013MIT Division of Health Sciences and Technology","ror":"https://ror.org/00jjeh629","country_code":"US","type":"education","lineage":["https://openalex.org/I4210092658"]},{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chunhong Mao","raw_affiliation_strings":["1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA 24061 and 2Children's Hospital Informatics Program, Harvard-MIT Division of Health Sciences and Technology, Boston, MA 02115, USA"],"affiliations":[{"raw_affiliation_string":"1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA 24061 and 2Children's Hospital Informatics Program, Harvard-MIT Division of Health Sciences and Technology, Boston, MA 02115, USA","institution_ids":["https://openalex.org/I859038795","https://openalex.org/I4210092658"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078461765","display_name":"Oral Dalay","orcid":null},"institutions":[{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]},{"id":"https://openalex.org/I4210092658","display_name":"Harvard\u2013MIT Division of Health Sciences and Technology","ror":"https://ror.org/00jjeh629","country_code":"US","type":"education","lineage":["https://openalex.org/I4210092658"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Oral Dalay","raw_affiliation_strings":["1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA 24061 and 2Children's Hospital Informatics Program, Harvard-MIT Division of Health Sciences and Technology, Boston, MA 02115, USA"],"affiliations":[{"raw_affiliation_string":"1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA 24061 and 2Children's Hospital Informatics Program, Harvard-MIT Division of Health Sciences and Technology, Boston, MA 02115, USA","institution_ids":["https://openalex.org/I859038795","https://openalex.org/I4210092658"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040025864","display_name":"Maulik Shukla","orcid":"https://orcid.org/0009-0002-3396-5725"},"institutions":[{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]},{"id":"https://openalex.org/I4210092658","display_name":"Harvard\u2013MIT Division of Health Sciences and Technology","ror":"https://ror.org/00jjeh629","country_code":"US","type":"education","lineage":["https://openalex.org/I4210092658"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Maulik Shukla","raw_affiliation_strings":["1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA 24061 and 2Children's Hospital Informatics Program, Harvard-MIT Division of Health Sciences and Technology, Boston, MA 02115, USA"],"affiliations":[{"raw_affiliation_string":"1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA 24061 and 2Children's Hospital Informatics Program, Harvard-MIT Division of Health Sciences and Technology, Boston, MA 02115, USA","institution_ids":["https://openalex.org/I859038795","https://openalex.org/I4210092658"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079034561","display_name":"Clark C. Freifeld","orcid":null},"institutions":[{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]},{"id":"https://openalex.org/I4210092658","display_name":"Harvard\u2013MIT Division of Health Sciences and Technology","ror":"https://ror.org/00jjeh629","country_code":"US","type":"education","lineage":["https://openalex.org/I4210092658"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Clark C. Freifeld","raw_affiliation_strings":["1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA 24061 and 2Children's Hospital Informatics Program, Harvard-MIT Division of Health Sciences and Technology, Boston, MA 02115, USA"],"affiliations":[{"raw_affiliation_string":"1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA 24061 and 2Children's Hospital Informatics Program, Harvard-MIT Division of Health Sciences and Technology, Boston, MA 02115, USA","institution_ids":["https://openalex.org/I859038795","https://openalex.org/I4210092658"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088186295","display_name":"Anne G. Hoen","orcid":"https://orcid.org/0000-0003-0035-8689"},"institutions":[{"id":"https://openalex.org/I4210092658","display_name":"Harvard\u2013MIT Division of Health Sciences and Technology","ror":"https://ror.org/00jjeh629","country_code":"US","type":"education","lineage":["https://openalex.org/I4210092658"]},{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anne Gatewood Hoen","raw_affiliation_strings":["1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA 24061 and 2Children's Hospital Informatics Program, Harvard-MIT Division of Health Sciences and Technology, Boston, MA 02115, USA"],"affiliations":[{"raw_affiliation_string":"1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA 24061 and 2Children's Hospital Informatics Program, Harvard-MIT Division of Health Sciences and Technology, Boston, MA 02115, USA","institution_ids":["https://openalex.org/I859038795","https://openalex.org/I4210092658"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087882430","display_name":"John S. Brownstein","orcid":"https://orcid.org/0000-0001-8568-5317"},"institutions":[{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]},{"id":"https://openalex.org/I4210092658","display_name":"Harvard\u2013MIT Division of Health Sciences and Technology","ror":"https://ror.org/00jjeh629","country_code":"US","type":"education","lineage":["https://openalex.org/I4210092658"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John S. Brownstein","raw_affiliation_strings":["1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA 24061 and 2Children's Hospital Informatics Program, Harvard-MIT Division of Health Sciences and Technology, Boston, MA 02115, USA"],"affiliations":[{"raw_affiliation_string":"1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA 24061 and 2Children's Hospital Informatics Program, Harvard-MIT Division of Health Sciences and Technology, Boston, MA 02115, USA","institution_ids":["https://openalex.org/I859038795","https://openalex.org/I4210092658"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5058609337","display_name":"Bruno Sobral","orcid":"https://orcid.org/0000-0003-3908-577X"},"institutions":[{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]},{"id":"https://openalex.org/I4210092658","display_name":"Harvard\u2013MIT Division of Health Sciences and Technology","ror":"https://ror.org/00jjeh629","country_code":"US","type":"education","lineage":["https://openalex.org/I4210092658"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bruno W. Sobral","raw_affiliation_strings":["1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA 24061 and 2Children's Hospital Informatics Program, Harvard-MIT Division of Health Sciences and Technology, Boston, MA 02115, USA"],"affiliations":[{"raw_affiliation_string":"1 Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA 24061 and 2Children's Hospital Informatics Program, Harvard-MIT Division of Health Sciences and Technology, Boston, MA 02115, USA","institution_ids":["https://openalex.org/I859038795","https://openalex.org/I4210092658"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5090212849"],"corresponding_institution_ids":["https://openalex.org/I4210092658","https://openalex.org/I859038795"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.0672,"has_fulltext":true,"cited_by_count":20,"citation_normalized_percentile":{"value":0.76260691,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"27","issue":"16","first_page":"2279","last_page":"2287"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9890999794006348,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.9725000262260437,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/geolocation","display_name":"Geolocation","score":0.6848281025886536},{"id":"https://openalex.org/keywords/infectious-disease","display_name":"Infectious disease (medical specialty)","score":0.6397314071655273},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6172143220901489},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5399138927459717},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.46109071373939514},{"id":"https://openalex.org/keywords/pathogen","display_name":"Pathogen","score":0.4363316297531128},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.4330924153327942},{"id":"https://openalex.org/keywords/host","display_name":"Host (biology)","score":0.42681825160980225},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4204164743423462},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4048771262168884},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.3805226683616638},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.31327471137046814},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3093082904815674},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.19330927729606628},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1334659457206726},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.12828972935676575}],"concepts":[{"id":"https://openalex.org/C22041718","wikidata":"https://www.wikidata.org/wiki/Q638949","display_name":"Geolocation","level":2,"score":0.6848281025886536},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.6397314071655273},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6172143220901489},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5399138927459717},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.46109071373939514},{"id":"https://openalex.org/C2776460866","wikidata":"https://www.wikidata.org/wiki/Q170065","display_name":"Pathogen","level":2,"score":0.4363316297531128},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.4330924153327942},{"id":"https://openalex.org/C126831891","wikidata":"https://www.wikidata.org/wiki/Q221673","display_name":"Host (biology)","level":2,"score":0.42681825160980225},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4204164743423462},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4048771262168884},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.3805226683616638},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.31327471137046814},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3093082904815674},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.19330927729606628},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1334659457206726},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.12828972935676575},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D001424","descriptor_name":"Bacterial Infections","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D001424","descriptor_name":"Bacterial Infections","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D001424","descriptor_name":"Bacterial Infections","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D003141","descriptor_name":"Communicable Diseases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003141","descriptor_name":"Communicable Diseases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003141","descriptor_name":"Communicable Diseases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003141","descriptor_name":"Communicable Diseases","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D003141","descriptor_name":"Communicable Diseases","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D003141","descriptor_name":"Communicable Diseases","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D003141","descriptor_name":"Communicable Diseases","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D003141","descriptor_name":"Communicable Diseases","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D003141","descriptor_name":"Communicable Diseases","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014774","descriptor_name":"Virulence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014774","descriptor_name":"Virulence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014774","descriptor_name":"Virulence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054884","descriptor_name":"Host-Pathogen Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054884","descriptor_name":"Host-Pathogen Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054884","descriptor_name":"Host-Pathogen Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btr391","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr391","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/16/2279/48864337/bioinformatics_27_16_2279.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:21712250","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21712250","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:open-archive.highwire.org:bioinfo:27/16/2279","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/cgi/content/short/27/16/2279","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pubmedcentral.nih.gov:3150046","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3150046","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btr391","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr391","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/16/2279/48864337/bioinformatics_27_16_2279.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure","score":0.4399999976158142}],"awards":[{"id":"https://openalex.org/G3473995101","display_name":null,"funder_award_id":"HHSN2722009000","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"},{"id":"https://openalex.org/G4836905161","display_name":null,"funder_award_id":"HHSN272200900040C","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5081952056","display_name":null,"funder_award_id":"HHSN272200900040C","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"}],"funders":[{"id":"https://openalex.org/F4320306085","display_name":"U.S. Department of Health and Human Services","ror":"https://ror.org/033jnv181"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2096092072.pdf","grobid_xml":"https://content.openalex.org/works/W2096092072.grobid-xml"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W344139118","https://openalex.org/W415943874","https://openalex.org/W1544407491","https://openalex.org/W1546931455","https://openalex.org/W1995851640","https://openalex.org/W1997815596","https://openalex.org/W1999246265","https://openalex.org/W2006312665","https://openalex.org/W2055043387","https://openalex.org/W2059325738","https://openalex.org/W2064086754","https://openalex.org/W2083045667","https://openalex.org/W2089201297","https://openalex.org/W2098621809","https://openalex.org/W2101730352","https://openalex.org/W2106197985","https://openalex.org/W2117451404","https://openalex.org/W2118754867","https://openalex.org/W2120467164","https://openalex.org/W2130790725","https://openalex.org/W2155806032","https://openalex.org/W2166243092","https://openalex.org/W2169035256","https://openalex.org/W2170603846","https://openalex.org/W2918064359","https://openalex.org/W6614378162","https://openalex.org/W6684489488"],"related_works":["https://openalex.org/W2163194970","https://openalex.org/W3105229732","https://openalex.org/W2799094075","https://openalex.org/W2892370851","https://openalex.org/W2945387931","https://openalex.org/W2187946387","https://openalex.org/W2091398531","https://openalex.org/W2343234619","https://openalex.org/W3173815060","https://openalex.org/W4286497165"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":3},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":2}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
