{"id":"https://openalex.org/W2124056645","doi":"https://doi.org/10.1093/bioinformatics/btr108","title":"MemLoci: predicting subcellular localization of membrane proteins in eukaryotes","display_name":"MemLoci: predicting subcellular localization of membrane proteins in eukaryotes","publication_year":2011,"publication_date":"2011-03-02","ids":{"openalex":"https://openalex.org/W2124056645","doi":"https://doi.org/10.1093/bioinformatics/btr108","mag":"2124056645","pmid":"https://pubmed.ncbi.nlm.nih.gov/21367869"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btr108","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr108","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/9/1224/48869764/bioinformatics_27_9_1224.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/27/9/1224/48869764/bioinformatics_27_9_1224.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5087253349","display_name":"Andrea Pierleoni","orcid":"https://orcid.org/0000-0002-1083-2113"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Andrea Pierleoni","raw_affiliation_strings":["1 Biocomputing Group, Computational Biology Network, via San Giacomo 9/2, 40126 Bologna and 2Externautics s.p.a., Via Fiorentina 1, 53100 Siena, Italy"],"affiliations":[{"raw_affiliation_string":"1 Biocomputing Group, Computational Biology Network, via San Giacomo 9/2, 40126 Bologna and 2Externautics s.p.a., Via Fiorentina 1, 53100 Siena, Italy","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044479288","display_name":"Pier Luigi Martelli","orcid":"https://orcid.org/0000-0002-0274-5669"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Pier Luigi Martelli","raw_affiliation_strings":["1 Biocomputing Group, Computational Biology Network, via San Giacomo 9/2, 40126 Bologna and 2Externautics s.p.a., Via Fiorentina 1, 53100 Siena, Italy"],"affiliations":[{"raw_affiliation_string":"1 Biocomputing Group, Computational Biology Network, via San Giacomo 9/2, 40126 Bologna and 2Externautics s.p.a., Via Fiorentina 1, 53100 Siena, Italy","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5053410790","display_name":"Rita Casadio","orcid":"https://orcid.org/0000-0002-7462-7039"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Rita Casadio","raw_affiliation_strings":["1 Biocomputing Group, Computational Biology Network, via San Giacomo 9/2, 40126 Bologna and 2Externautics s.p.a., Via Fiorentina 1, 53100 Siena, Italy"],"affiliations":[{"raw_affiliation_string":"1 Biocomputing Group, Computational Biology Network, via San Giacomo 9/2, 40126 Bologna and 2Externautics s.p.a., Via Fiorentina 1, 53100 Siena, Italy","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5087253349"],"corresponding_institution_ids":[],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":2.7938,"has_fulltext":true,"cited_by_count":54,"citation_normalized_percentile":{"value":0.91075727,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"27","issue":"9","first_page":"1224","last_page":"1230"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/subcellular-localization","display_name":"Subcellular localization","score":0.827513575553894},{"id":"https://openalex.org/keywords/protein-subcellular-localization-prediction","display_name":"Protein subcellular localization prediction","score":0.7195489406585693},{"id":"https://openalex.org/keywords/protein-sorting-signals","display_name":"Protein Sorting Signals","score":0.6753722429275513},{"id":"https://openalex.org/keywords/membrane-protein","display_name":"Membrane protein","score":0.5774948596954346},{"id":"https://openalex.org/keywords/organelle","display_name":"Organelle","score":0.5148445963859558},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5078902840614319},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.49486225843429565},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.46747469902038574},{"id":"https://openalex.org/keywords/membrane","display_name":"Membrane","score":0.45307326316833496},{"id":"https://openalex.org/keywords/globular-protein","display_name":"Globular protein","score":0.4443420171737671},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4387175738811493},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.43791598081588745},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.4275580048561096},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.41682541370391846},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3812639117240906},{"id":"https://openalex.org/keywords/cytoplasm","display_name":"Cytoplasm","score":0.3465404510498047},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.2605193555355072},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.19743478298187256},{"id":"https://openalex.org/keywords/signal-peptide","display_name":"Signal peptide","score":0.16402849555015564}],"concepts":[{"id":"https://openalex.org/C2776879804","wikidata":"https://www.wikidata.org/wiki/Q7630919","display_name":"Subcellular localization","level":3,"score":0.827513575553894},{"id":"https://openalex.org/C140051345","wikidata":"https://www.wikidata.org/wiki/Q7251501","display_name":"Protein subcellular localization prediction","level":3,"score":0.7195489406585693},{"id":"https://openalex.org/C2908929163","wikidata":"https://www.wikidata.org/wiki/Q658882","display_name":"Protein Sorting Signals","level":5,"score":0.6753722429275513},{"id":"https://openalex.org/C144647389","wikidata":"https://www.wikidata.org/wiki/Q423042","display_name":"Membrane protein","level":3,"score":0.5774948596954346},{"id":"https://openalex.org/C168240541","wikidata":"https://www.wikidata.org/wiki/Q45948","display_name":"Organelle","level":2,"score":0.5148445963859558},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5078902840614319},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.49486225843429565},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.46747469902038574},{"id":"https://openalex.org/C41625074","wikidata":"https://www.wikidata.org/wiki/Q176088","display_name":"Membrane","level":2,"score":0.45307326316833496},{"id":"https://openalex.org/C105168689","wikidata":"https://www.wikidata.org/wiki/Q901969","display_name":"Globular protein","level":2,"score":0.4443420171737671},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4387175738811493},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.43791598081588745},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.4275580048561096},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.41682541370391846},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3812639117240906},{"id":"https://openalex.org/C190062978","wikidata":"https://www.wikidata.org/wiki/Q79899","display_name":"Cytoplasm","level":2,"score":0.3465404510498047},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.2605193555355072},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.19743478298187256},{"id":"https://openalex.org/C10858879","wikidata":"https://www.wikidata.org/wiki/Q899790","display_name":"Signal peptide","level":4,"score":0.16402849555015564},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D005057","descriptor_name":"Eukaryotic Cells","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D005057","descriptor_name":"Eukaryotic Cells","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D005057","descriptor_name":"Eukaryotic Cells","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D015388","descriptor_name":"Organelles","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D015388","descriptor_name":"Organelles","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D015388","descriptor_name":"Organelles","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D021381","descriptor_name":"Protein Transport","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021381","descriptor_name":"Protein Transport","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021381","descriptor_name":"Protein Transport","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021382","descriptor_name":"Protein Sorting Signals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021382","descriptor_name":"Protein Sorting Signals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021382","descriptor_name":"Protein Sorting Signals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btr108","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr108","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/9/1224/48869764/bioinformatics_27_9_1224.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:21367869","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21367869","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:cris.unibo.it:11585/101381","is_oa":false,"landing_page_url":"http://hdl.handle.net/11585/101381","pdf_url":null,"source":{"id":"https://openalex.org/S4306402579","display_name":"Archivio istituzionale della ricerca (Alma Mater Studiorum Universit\u00e0 di Bologna)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210117483","host_organization_name":"Istituto di Ematologia di Bologna","host_organization_lineage":["https://openalex.org/I4210117483"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:zenodo.org:188722","is_oa":true,"landing_page_url":"https://www.openaccessrepository.it/record/188722","pdf_url":null,"source":{"id":"https://openalex.org/S4306402478","display_name":"INFM-OAR (INFN Catania)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210116497","host_organization_name":"Istituto Nazionale di Fisica Nucleare, Sezione di Catania","host_organization_lineage":["https://openalex.org/I4210116497"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btr108","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr108","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/9/1224/48869764/bioinformatics_27_9_1224.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6399999856948853,"id":"https://metadata.un.org/sdg/10","display_name":"Reduced inequalities"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2124056645.pdf","grobid_xml":"https://content.openalex.org/works/W2124056645.grobid-xml"},"referenced_works_count":43,"referenced_works":["https://openalex.org/W1659594591","https://openalex.org/W1975304761","https://openalex.org/W1977523984","https://openalex.org/W2002364392","https://openalex.org/W2011366293","https://openalex.org/W2020220420","https://openalex.org/W2027327211","https://openalex.org/W2028811272","https://openalex.org/W2030592938","https://openalex.org/W2036956828","https://openalex.org/W2037838449","https://openalex.org/W2043312574","https://openalex.org/W2050524321","https://openalex.org/W2051002350","https://openalex.org/W2053535202","https://openalex.org/W2055775193","https://openalex.org/W2059347459","https://openalex.org/W2066015352","https://openalex.org/W2066770484","https://openalex.org/W2069516894","https://openalex.org/W2086586192","https://openalex.org/W2092179351","https://openalex.org/W2107432340","https://openalex.org/W2108898978","https://openalex.org/W2110425545","https://openalex.org/W2111127373","https://openalex.org/W2115112794","https://openalex.org/W2115998090","https://openalex.org/W2132804879","https://openalex.org/W2139938595","https://openalex.org/W2141816565","https://openalex.org/W2154016458","https://openalex.org/W2154206349","https://openalex.org/W2158173168","https://openalex.org/W2160941422","https://openalex.org/W2163751138","https://openalex.org/W2169043568","https://openalex.org/W2169432731","https://openalex.org/W2752885492","https://openalex.org/W3103695027","https://openalex.org/W3145128584","https://openalex.org/W4285719527","https://openalex.org/W6685211713"],"related_works":["https://openalex.org/W1851748528","https://openalex.org/W2124056645","https://openalex.org/W2160979370","https://openalex.org/W2804657076","https://openalex.org/W3001208427","https://openalex.org/W2073950431","https://openalex.org/W3170914833","https://openalex.org/W2149822709","https://openalex.org/W2128345772","https://openalex.org/W2801813992"],"abstract_inverted_index":{"The":[0],"MemLoci":[1],"server":[2],"is":[3],"freely":[4],"available":[5],"on":[6],"the":[7,14,20],"web":[8],"at:":[9],"http://mu2py.biocomp.unibo.it/memloci.":[10],"Datasets":[11],"described":[12],"in":[13],"article":[15],"can":[16],"be":[17],"downloaded":[18],"at":[19],"same":[21],"site.":[22]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":8},{"year":2012,"cited_by_count":5}],"updated_date":"2026-03-21T08:13:44.787528","created_date":"2025-10-10T00:00:00"}