{"id":"https://openalex.org/W2105463482","doi":"https://doi.org/10.1093/bioinformatics/btr094","title":"A high-throughput processing service for retention time alignment of complex proteomics and metabolomics LC-MS data","display_name":"A high-throughput processing service for retention time alignment of complex proteomics and metabolomics LC-MS data","publication_year":2011,"publication_date":"2011-02-23","ids":{"openalex":"https://openalex.org/W2105463482","doi":"https://doi.org/10.1093/bioinformatics/btr094","mag":"2105463482","pmid":"https://pubmed.ncbi.nlm.nih.gov/21349866"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btr094","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr094","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/8/1176/17103634/btr094.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/27/8/1176/17103634/btr094.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5010438806","display_name":"Isthiaq Ahmad","orcid":null},"institutions":[{"id":"https://openalex.org/I1334415907","display_name":"University Medical Center Groningen","ror":"https://ror.org/03cv38k47","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I1334415907"]},{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I169381384","display_name":"University of Groningen","ror":"https://ror.org/012p63287","country_code":"NL","type":"education","lineage":["https://openalex.org/I169381384"]},{"id":"https://openalex.org/I193662353","display_name":"Utrecht University","ror":"https://ror.org/04pp8hn57","country_code":"NL","type":"education","lineage":["https://openalex.org/I193662353"]},{"id":"https://openalex.org/I2801582894","display_name":"Netherlands Bioinformatics Centre","ror":"https://ror.org/01r0k6965","country_code":"NL","type":"nonprofit","lineage":["https://openalex.org/I2801582894"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Isthiaq Ahmad","raw_affiliation_strings":["1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands","institution_ids":["https://openalex.org/I1334415907","https://openalex.org/I2802934949","https://openalex.org/I169381384","https://openalex.org/I145872427","https://openalex.org/I2801582894","https://openalex.org/I193662353"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047493562","display_name":"Frank Suits","orcid":"https://orcid.org/0000-0001-6427-9299"},"institutions":[{"id":"https://openalex.org/I1334415907","display_name":"University Medical Center Groningen","ror":"https://ror.org/03cv38k47","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I1334415907"]},{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I169381384","display_name":"University of Groningen","ror":"https://ror.org/012p63287","country_code":"NL","type":"education","lineage":["https://openalex.org/I169381384"]},{"id":"https://openalex.org/I193662353","display_name":"Utrecht University","ror":"https://ror.org/04pp8hn57","country_code":"NL","type":"education","lineage":["https://openalex.org/I193662353"]},{"id":"https://openalex.org/I2801582894","display_name":"Netherlands Bioinformatics Centre","ror":"https://ror.org/01r0k6965","country_code":"NL","type":"nonprofit","lineage":["https://openalex.org/I2801582894"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Frank Suits","raw_affiliation_strings":["1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands","institution_ids":["https://openalex.org/I1334415907","https://openalex.org/I2802934949","https://openalex.org/I169381384","https://openalex.org/I145872427","https://openalex.org/I2801582894","https://openalex.org/I193662353"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015805032","display_name":"Berend Hoekman","orcid":null},"institutions":[{"id":"https://openalex.org/I1334415907","display_name":"University Medical Center Groningen","ror":"https://ror.org/03cv38k47","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I1334415907"]},{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I169381384","display_name":"University of Groningen","ror":"https://ror.org/012p63287","country_code":"NL","type":"education","lineage":["https://openalex.org/I169381384"]},{"id":"https://openalex.org/I193662353","display_name":"Utrecht University","ror":"https://ror.org/04pp8hn57","country_code":"NL","type":"education","lineage":["https://openalex.org/I193662353"]},{"id":"https://openalex.org/I2801582894","display_name":"Netherlands Bioinformatics Centre","ror":"https://ror.org/01r0k6965","country_code":"NL","type":"nonprofit","lineage":["https://openalex.org/I2801582894"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Berend Hoekman","raw_affiliation_strings":["1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands","institution_ids":["https://openalex.org/I1334415907","https://openalex.org/I2802934949","https://openalex.org/I169381384","https://openalex.org/I145872427","https://openalex.org/I2801582894","https://openalex.org/I193662353"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052368642","display_name":"Morris A. Swertz","orcid":"https://orcid.org/0000-0002-0979-3401"},"institutions":[{"id":"https://openalex.org/I1334415907","display_name":"University Medical Center Groningen","ror":"https://ror.org/03cv38k47","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I1334415907"]},{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I169381384","display_name":"University of Groningen","ror":"https://ror.org/012p63287","country_code":"NL","type":"education","lineage":["https://openalex.org/I169381384"]},{"id":"https://openalex.org/I193662353","display_name":"Utrecht University","ror":"https://ror.org/04pp8hn57","country_code":"NL","type":"education","lineage":["https://openalex.org/I193662353"]},{"id":"https://openalex.org/I2801582894","display_name":"Netherlands Bioinformatics Centre","ror":"https://ror.org/01r0k6965","country_code":"NL","type":"nonprofit","lineage":["https://openalex.org/I2801582894"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Morris A. Swertz","raw_affiliation_strings":["1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands","institution_ids":["https://openalex.org/I1334415907","https://openalex.org/I2802934949","https://openalex.org/I169381384","https://openalex.org/I145872427","https://openalex.org/I2801582894","https://openalex.org/I193662353"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077543410","display_name":"Heorhiy Byelas","orcid":null},"institutions":[{"id":"https://openalex.org/I1334415907","display_name":"University Medical Center Groningen","ror":"https://ror.org/03cv38k47","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I1334415907"]},{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I169381384","display_name":"University of Groningen","ror":"https://ror.org/012p63287","country_code":"NL","type":"education","lineage":["https://openalex.org/I169381384"]},{"id":"https://openalex.org/I193662353","display_name":"Utrecht University","ror":"https://ror.org/04pp8hn57","country_code":"NL","type":"education","lineage":["https://openalex.org/I193662353"]},{"id":"https://openalex.org/I2801582894","display_name":"Netherlands Bioinformatics Centre","ror":"https://ror.org/01r0k6965","country_code":"NL","type":"nonprofit","lineage":["https://openalex.org/I2801582894"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Heorhiy Byelas","raw_affiliation_strings":["1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands","institution_ids":["https://openalex.org/I1334415907","https://openalex.org/I2802934949","https://openalex.org/I169381384","https://openalex.org/I145872427","https://openalex.org/I2801582894","https://openalex.org/I193662353"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002999145","display_name":"Martijn Dijkstra","orcid":"https://orcid.org/0000-0001-8345-8196"},"institutions":[{"id":"https://openalex.org/I1334415907","display_name":"University Medical Center Groningen","ror":"https://ror.org/03cv38k47","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I1334415907"]},{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I169381384","display_name":"University of Groningen","ror":"https://ror.org/012p63287","country_code":"NL","type":"education","lineage":["https://openalex.org/I169381384"]},{"id":"https://openalex.org/I193662353","display_name":"Utrecht University","ror":"https://ror.org/04pp8hn57","country_code":"NL","type":"education","lineage":["https://openalex.org/I193662353"]},{"id":"https://openalex.org/I2801582894","display_name":"Netherlands Bioinformatics Centre","ror":"https://ror.org/01r0k6965","country_code":"NL","type":"nonprofit","lineage":["https://openalex.org/I2801582894"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Martijn Dijkstra","raw_affiliation_strings":["1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands","institution_ids":["https://openalex.org/I1334415907","https://openalex.org/I2802934949","https://openalex.org/I169381384","https://openalex.org/I145872427","https://openalex.org/I2801582894","https://openalex.org/I193662353"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033074461","display_name":"Rob Hooft","orcid":"https://orcid.org/0000-0001-6825-9439"},"institutions":[{"id":"https://openalex.org/I1334415907","display_name":"University Medical Center Groningen","ror":"https://ror.org/03cv38k47","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I1334415907"]},{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I169381384","display_name":"University of Groningen","ror":"https://ror.org/012p63287","country_code":"NL","type":"education","lineage":["https://openalex.org/I169381384"]},{"id":"https://openalex.org/I193662353","display_name":"Utrecht University","ror":"https://ror.org/04pp8hn57","country_code":"NL","type":"education","lineage":["https://openalex.org/I193662353"]},{"id":"https://openalex.org/I2801582894","display_name":"Netherlands Bioinformatics Centre","ror":"https://ror.org/01r0k6965","country_code":"NL","type":"nonprofit","lineage":["https://openalex.org/I2801582894"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Rob Hooft","raw_affiliation_strings":["1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands","institution_ids":["https://openalex.org/I1334415907","https://openalex.org/I2802934949","https://openalex.org/I169381384","https://openalex.org/I145872427","https://openalex.org/I2801582894","https://openalex.org/I193662353"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020726716","display_name":"Dmitry Katsubo","orcid":null},"institutions":[{"id":"https://openalex.org/I1334415907","display_name":"University Medical Center Groningen","ror":"https://ror.org/03cv38k47","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I1334415907"]},{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I169381384","display_name":"University of Groningen","ror":"https://ror.org/012p63287","country_code":"NL","type":"education","lineage":["https://openalex.org/I169381384"]},{"id":"https://openalex.org/I193662353","display_name":"Utrecht University","ror":"https://ror.org/04pp8hn57","country_code":"NL","type":"education","lineage":["https://openalex.org/I193662353"]},{"id":"https://openalex.org/I2801582894","display_name":"Netherlands Bioinformatics Centre","ror":"https://ror.org/01r0k6965","country_code":"NL","type":"nonprofit","lineage":["https://openalex.org/I2801582894"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Dmitry Katsubo","raw_affiliation_strings":["1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands","institution_ids":["https://openalex.org/I1334415907","https://openalex.org/I2802934949","https://openalex.org/I169381384","https://openalex.org/I145872427","https://openalex.org/I2801582894","https://openalex.org/I193662353"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059462875","display_name":"Bas van Breukelen","orcid":"https://orcid.org/0000-0001-9514-9876"},"institutions":[{"id":"https://openalex.org/I1334415907","display_name":"University Medical Center Groningen","ror":"https://ror.org/03cv38k47","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I1334415907"]},{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I169381384","display_name":"University of Groningen","ror":"https://ror.org/012p63287","country_code":"NL","type":"education","lineage":["https://openalex.org/I169381384"]},{"id":"https://openalex.org/I193662353","display_name":"Utrecht University","ror":"https://ror.org/04pp8hn57","country_code":"NL","type":"education","lineage":["https://openalex.org/I193662353"]},{"id":"https://openalex.org/I2801582894","display_name":"Netherlands Bioinformatics Centre","ror":"https://ror.org/01r0k6965","country_code":"NL","type":"nonprofit","lineage":["https://openalex.org/I2801582894"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Bas van Breukelen","raw_affiliation_strings":["1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands","institution_ids":["https://openalex.org/I1334415907","https://openalex.org/I2802934949","https://openalex.org/I169381384","https://openalex.org/I145872427","https://openalex.org/I2801582894","https://openalex.org/I193662353"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006922451","display_name":"Rainer Bischoff","orcid":"https://orcid.org/0000-0001-9849-0121"},"institutions":[{"id":"https://openalex.org/I1334415907","display_name":"University Medical Center Groningen","ror":"https://ror.org/03cv38k47","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I1334415907"]},{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I169381384","display_name":"University of Groningen","ror":"https://ror.org/012p63287","country_code":"NL","type":"education","lineage":["https://openalex.org/I169381384"]},{"id":"https://openalex.org/I193662353","display_name":"Utrecht University","ror":"https://ror.org/04pp8hn57","country_code":"NL","type":"education","lineage":["https://openalex.org/I193662353"]},{"id":"https://openalex.org/I2801582894","display_name":"Netherlands Bioinformatics Centre","ror":"https://ror.org/01r0k6965","country_code":"NL","type":"nonprofit","lineage":["https://openalex.org/I2801582894"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Rainer Bischoff","raw_affiliation_strings":["1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands","institution_ids":["https://openalex.org/I1334415907","https://openalex.org/I2802934949","https://openalex.org/I169381384","https://openalex.org/I145872427","https://openalex.org/I2801582894","https://openalex.org/I193662353"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5087131640","display_name":"P\u00e9ter Horvatovich","orcid":"https://orcid.org/0000-0003-2218-1140"},"institutions":[{"id":"https://openalex.org/I1334415907","display_name":"University Medical Center Groningen","ror":"https://ror.org/03cv38k47","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I1334415907"]},{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I169381384","display_name":"University of Groningen","ror":"https://ror.org/012p63287","country_code":"NL","type":"education","lineage":["https://openalex.org/I169381384"]},{"id":"https://openalex.org/I193662353","display_name":"Utrecht University","ror":"https://ror.org/04pp8hn57","country_code":"NL","type":"education","lineage":["https://openalex.org/I193662353"]},{"id":"https://openalex.org/I2801582894","display_name":"Netherlands Bioinformatics Centre","ror":"https://ror.org/01r0k6965","country_code":"NL","type":"nonprofit","lineage":["https://openalex.org/I2801582894"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]}],"countries":["NL"],"is_corresponding":true,"raw_author_name":"Peter Horvatovich","raw_affiliation_strings":["1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands","Medicinal Chemistry and Bioanalysis (MCB)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Analytical Biochemistry, Department of Pharmacy, University of Groningen, Groningen, 2Bioassist, Netherlands Bioinformatics Centre, Nijmegen, 3Bioinformatics in Proteomics, Netherlands Proteomics Centre, Utrecht, The Netherlands, 4Protein Science Group, IBM T.J. Watson Research Centre, Yorktown Heights, New York, USA, 5Genomics Coordination Center, Department of Genetics, University Medical Center Groningen, Groningen, 6Center for Medical Biomics, University of Groningen Groningen and 7Biomolecular Mass Spectrometry and Proteomics Group, Utrecht University, Utrecht, The Netherlands","institution_ids":["https://openalex.org/I1334415907","https://openalex.org/I2802934949","https://openalex.org/I169381384","https://openalex.org/I145872427","https://openalex.org/I2801582894","https://openalex.org/I193662353"]},{"raw_affiliation_string":"Medicinal Chemistry and Bioanalysis (MCB)","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5087131640"],"corresponding_institution_ids":["https://openalex.org/I1334415907","https://openalex.org/I145872427","https://openalex.org/I169381384","https://openalex.org/I193662353","https://openalex.org/I2801582894","https://openalex.org/I2802934949"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.9679,"has_fulltext":true,"cited_by_count":11,"citation_normalized_percentile":{"value":0.73787058,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"27","issue":"8","first_page":"1176","last_page":"1178"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.636900007724762,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.636900007724762,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.2969000041484833,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.007899999618530273,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.8336585164070129},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6891213655471802},{"id":"https://openalex.org/keywords/throughput","display_name":"Throughput","score":0.6506974697113037},{"id":"https://openalex.org/keywords/web-service","display_name":"Web service","score":0.5255124568939209},{"id":"https://openalex.org/keywords/service","display_name":"Service (business)","score":0.5078626275062561},{"id":"https://openalex.org/keywords/sample","display_name":"Sample (material)","score":0.4793318510055542},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.47553443908691406},{"id":"https://openalex.org/keywords/dynamic-time-warping","display_name":"Dynamic time warping","score":0.4550323486328125},{"id":"https://openalex.org/keywords/volume","display_name":"Volume (thermodynamics)","score":0.4348421096801758},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.40314891934394836},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4018205404281616},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.214097261428833},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.20493310689926147},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.1357516348361969},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.11067289113998413}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.8336585164070129},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6891213655471802},{"id":"https://openalex.org/C157764524","wikidata":"https://www.wikidata.org/wiki/Q1383412","display_name":"Throughput","level":3,"score":0.6506974697113037},{"id":"https://openalex.org/C35578498","wikidata":"https://www.wikidata.org/wiki/Q193424","display_name":"Web service","level":2,"score":0.5255124568939209},{"id":"https://openalex.org/C2780378061","wikidata":"https://www.wikidata.org/wiki/Q25351891","display_name":"Service (business)","level":2,"score":0.5078626275062561},{"id":"https://openalex.org/C198531522","wikidata":"https://www.wikidata.org/wiki/Q485146","display_name":"Sample (material)","level":2,"score":0.4793318510055542},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.47553443908691406},{"id":"https://openalex.org/C88516994","wikidata":"https://www.wikidata.org/wiki/Q1268863","display_name":"Dynamic time warping","level":2,"score":0.4550323486328125},{"id":"https://openalex.org/C20556612","wikidata":"https://www.wikidata.org/wiki/Q4469374","display_name":"Volume (thermodynamics)","level":2,"score":0.4348421096801758},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.40314891934394836},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4018205404281616},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.214097261428833},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.20493310689926147},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.1357516348361969},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.11067289113998413},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.0},{"id":"https://openalex.org/C136264566","wikidata":"https://www.wikidata.org/wiki/Q159810","display_name":"Economy","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C555944384","wikidata":"https://www.wikidata.org/wiki/Q249","display_name":"Wireless","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002853","descriptor_name":"Chromatography, Liquid","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002853","descriptor_name":"Chromatography, Liquid","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002853","descriptor_name":"Chromatography, Liquid","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057166","descriptor_name":"High-Throughput Screening Assays","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057166","descriptor_name":"High-Throughput Screening Assays","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057166","descriptor_name":"High-Throughput Screening Assays","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btr094","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr094","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/8/1176/17103634/btr094.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:21349866","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21349866","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pure.rug.nl:openaire_cris_publications/e617bc68-6cf3-4809-8961-7b11b10001e7","is_oa":false,"landing_page_url":"https://research.rug.nl/en/publications/e617bc68-6cf3-4809-8961-7b11b10001e7","pdf_url":null,"source":{"id":"https://openalex.org/S4306400420","display_name":"University of Groningen research database (University of Groningen / Centre for Information Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I169381384","host_organization_name":"University of Groningen","host_organization_lineage":["https://openalex.org/I169381384"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Ahmad, I, Suits, F, Hoekman, B, Swertz, M A, Byelas, H, Dijkstra, M, Hooft, R, Katsubo, D, van Breukelen, B, Bischoff, R & Horvatovich, P 2011, 'A high-throughput processing service for retention time alignment of complex proteomics and metabolomics LC-MS data', Bioinformatics, vol. 27, no. 8, pp. 1176-1178. https://doi.org/10.1093/bioinformatics/btr094","raw_type":"info:eu-repo/semantics/publishedVersion"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btr094","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btr094","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/8/1176/17103634/btr094.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.49000000953674316,"id":"https://metadata.un.org/sdg/12","display_name":"Responsible consumption and production"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320321800","display_name":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek","ror":"https://ror.org/04jsz6e67"},{"id":"https://openalex.org/F4320328786","display_name":"Norwegian Biodiversity Information Centre","ror":"https://ror.org/04jnzhb65"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2105463482.pdf","grobid_xml":"https://content.openalex.org/works/W2105463482.grobid-xml"},"referenced_works_count":14,"referenced_works":["https://openalex.org/W1999517677","https://openalex.org/W2055029627","https://openalex.org/W2068703118","https://openalex.org/W2090959732","https://openalex.org/W2093767384","https://openalex.org/W2096975486","https://openalex.org/W2107202438","https://openalex.org/W2118868857","https://openalex.org/W2120858595","https://openalex.org/W2137653635","https://openalex.org/W2168715542","https://openalex.org/W2169558190","https://openalex.org/W2313110944","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2080761477","https://openalex.org/W3162437089","https://openalex.org/W2178609745","https://openalex.org/W2766619160","https://openalex.org/W2809771341","https://openalex.org/W2148620751","https://openalex.org/W2012386736","https://openalex.org/W2105009832","https://openalex.org/W2352828191","https://openalex.org/W2160055216"],"abstract_inverted_index":{"UNLABELLED:":[0],"Warp2D":[1,35],"is":[2,137,143,159],"a":[3],"novel":[4],"time":[5,38,49,89,114],"alignment":[6,39,90,115],"approach,":[7],"which":[8],"uses":[9],"the":[10,15,42,57,60,75,94,98,109,113],"overlapping":[11,78,101],"peak":[12,19,24,63,79,102],"volume":[13,80],"of":[14,77,81,97,100,112,128],"reference":[16],"and":[17,69,87,119,152],"sample":[18,61],"lists":[20],"to":[21,52],"correct":[22],"misleading":[23],"shifts.":[25],"Here,":[26],"we":[27],"present":[28],"an":[29],"easy-to-use":[30],"web":[31],"interface":[32],"for":[33,125],"high-throughput":[34],"batch":[36],"processing":[37,48,127,135],"service":[40,55,136],"using":[41],"Dutch":[43],"Life":[44],"Science":[45],"Grid,":[46],"reducing":[47],"from":[50,93],"days":[51],"hours.":[53],"This":[54],"provides":[56],"warping":[58],"function,":[59],"chromatogram":[62],"list":[64],"with":[65,105,147],"adjusted":[66],"retention":[67],"times":[68],"normalized":[70],"quality":[71,110],"scores":[72],"based":[73],"on":[74],"sum":[76,99],"all":[82],"peaks.":[83],"Heat":[84],"maps":[85],"before":[86],"after":[88],"are":[91,123,169],"created":[92],"arithmetic":[95],"mean":[96],"area":[103],"rearranged":[104],"hierarchical":[106],"clustering,":[107],"allowing":[108],"control":[111],"procedure.":[116],"Taverna":[117,141],"workflow":[118,142],"command":[120],"line":[121,157],"tool":[122,158],"provided":[124],"remote":[126],"local":[129],"user":[130],"data.":[131],"AVAILABILITY:":[132],"online":[133],"data":[134,168],"available":[138,144,160,170],"at":[139,145,154,161,171],"http://www.nbpp.nl/warp2d.html.":[140],"myExperiment":[146],"title":[148],"'2D":[149],"Time":[150],"Alignment-Webservice":[151],"Workflow'":[153],"http://www.myexperiment.org/workflows/1283.html.":[155],"Command":[156],"http://www.nbpp.nl/Warp2D_commandline.zip.":[162],"CONTACT:":[163],"p.l.horvatovich@rug.nl":[164],"SUPPLEMENTARY":[165],"INFORMATION:":[166],"Supplementary":[167],"Bioinformatics":[172],"online.":[173]},"counts_by_year":[{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":1}],"updated_date":"2026-06-23T06:36:01.041984","created_date":"2025-10-10T00:00:00"}
