{"id":"https://openalex.org/W2155233650","doi":"https://doi.org/10.1093/bioinformatics/btq664","title":"Improved predictions by Pcons.net using multiple templates","display_name":"Improved predictions by Pcons.net using multiple templates","publication_year":2010,"publication_date":"2010-12-11","ids":{"openalex":"https://openalex.org/W2155233650","doi":"https://doi.org/10.1093/bioinformatics/btq664","mag":"2155233650","pmid":"https://pubmed.ncbi.nlm.nih.gov/21149277"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btq664","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq664","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/3/426/48865445/bioinformatics_27_3_426.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/27/3/426/48865445/bioinformatics_27_3_426.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5036519166","display_name":"Per Larsson","orcid":"https://orcid.org/0000-0002-8418-4956"},"institutions":[{"id":"https://openalex.org/I161593684","display_name":"Stockholm University","ror":"https://ror.org/05f0yaq80","country_code":"SE","type":"education","lineage":["https://openalex.org/I161593684"]},{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]},{"id":"https://openalex.org/I4210103991","display_name":"Swedish e-Science Research Centre","ror":"https://ror.org/01e59yk92","country_code":"SE","type":"facility","lineage":["https://openalex.org/I4210103991"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Per Larsson","raw_affiliation_strings":["Center for Biomembrane Research, Department of Biochemistry and Biophysics, Swedish e-Science Research Centre, Stockholm Bioinformatics Centre, SciLifeLab, Stockholm University SE-10691 Stockholm, Sweden"],"affiliations":[{"raw_affiliation_string":"Center for Biomembrane Research, Department of Biochemistry and Biophysics, Swedish e-Science Research Centre, Stockholm Bioinformatics Centre, SciLifeLab, Stockholm University SE-10691 Stockholm, Sweden","institution_ids":["https://openalex.org/I4210103991","https://openalex.org/I161593684","https://openalex.org/I2800139495"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057759361","display_name":"Marcin J. Skwark","orcid":"https://orcid.org/0000-0002-2022-6766"},"institutions":[{"id":"https://openalex.org/I4210103991","display_name":"Swedish e-Science Research Centre","ror":"https://ror.org/01e59yk92","country_code":"SE","type":"facility","lineage":["https://openalex.org/I4210103991"]},{"id":"https://openalex.org/I161593684","display_name":"Stockholm University","ror":"https://ror.org/05f0yaq80","country_code":"SE","type":"education","lineage":["https://openalex.org/I161593684"]},{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Marcin J. Skwark","raw_affiliation_strings":["Center for Biomembrane Research, Department of Biochemistry and Biophysics, Swedish e-Science Research Centre, Stockholm Bioinformatics Centre, SciLifeLab, Stockholm University SE-10691 Stockholm, Sweden"],"affiliations":[{"raw_affiliation_string":"Center for Biomembrane Research, Department of Biochemistry and Biophysics, Swedish e-Science Research Centre, Stockholm Bioinformatics Centre, SciLifeLab, Stockholm University SE-10691 Stockholm, Sweden","institution_ids":["https://openalex.org/I4210103991","https://openalex.org/I161593684","https://openalex.org/I2800139495"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010890480","display_name":"Bj\u00f6rn Wallner","orcid":"https://orcid.org/0000-0002-3772-8279"},"institutions":[{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]},{"id":"https://openalex.org/I4210103991","display_name":"Swedish e-Science Research Centre","ror":"https://ror.org/01e59yk92","country_code":"SE","type":"facility","lineage":["https://openalex.org/I4210103991"]},{"id":"https://openalex.org/I161593684","display_name":"Stockholm University","ror":"https://ror.org/05f0yaq80","country_code":"SE","type":"education","lineage":["https://openalex.org/I161593684"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Bj\u00f6rn Wallner","raw_affiliation_strings":["Center for Biomembrane Research, Department of Biochemistry and Biophysics, Swedish e-Science Research Centre, Stockholm Bioinformatics Centre, SciLifeLab, Stockholm University SE-10691 Stockholm, Sweden"],"affiliations":[{"raw_affiliation_string":"Center for Biomembrane Research, Department of Biochemistry and Biophysics, Swedish e-Science Research Centre, Stockholm Bioinformatics Centre, SciLifeLab, Stockholm University SE-10691 Stockholm, Sweden","institution_ids":["https://openalex.org/I4210103991","https://openalex.org/I161593684","https://openalex.org/I2800139495"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5072903725","display_name":"Arne Elofsson","orcid":"https://orcid.org/0000-0002-7115-9751"},"institutions":[{"id":"https://openalex.org/I161593684","display_name":"Stockholm University","ror":"https://ror.org/05f0yaq80","country_code":"SE","type":"education","lineage":["https://openalex.org/I161593684"]},{"id":"https://openalex.org/I4210103991","display_name":"Swedish e-Science Research Centre","ror":"https://ror.org/01e59yk92","country_code":"SE","type":"facility","lineage":["https://openalex.org/I4210103991"]},{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]}],"countries":["SE"],"is_corresponding":true,"raw_author_name":"Arne Elofsson","raw_affiliation_strings":["Center for Biomembrane Research, Department of Biochemistry and Biophysics, Swedish e-Science Research Centre, Stockholm Bioinformatics Centre, SciLifeLab, Stockholm University SE-10691 Stockholm, Sweden"],"affiliations":[{"raw_affiliation_string":"Center for Biomembrane Research, Department of Biochemistry and Biophysics, Swedish e-Science Research Centre, Stockholm Bioinformatics Centre, SciLifeLab, Stockholm University SE-10691 Stockholm, Sweden","institution_ids":["https://openalex.org/I4210103991","https://openalex.org/I161593684","https://openalex.org/I2800139495"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5072903725"],"corresponding_institution_ids":["https://openalex.org/I161593684","https://openalex.org/I2800139495","https://openalex.org/I4210103991"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.793,"has_fulltext":true,"cited_by_count":14,"citation_normalized_percentile":{"value":0.71844997,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"27","issue":"3","first_page":"426","last_page":"427"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/template","display_name":"Template","score":0.9385676383972168},{"id":"https://openalex.org/keywords/casp","display_name":"CASP","score":0.8875999450683594},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8113656044006348},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.6503141522407532},{"id":"https://openalex.org/keywords/protein-structure-prediction","display_name":"Protein structure prediction","score":0.5454436540603638},{"id":"https://openalex.org/keywords/net","display_name":"Net (polyhedron)","score":0.5184992551803589},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4122445285320282},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.3031861186027527},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.1688518524169922},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09518349170684814},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.08857515454292297}],"concepts":[{"id":"https://openalex.org/C82714645","wikidata":"https://www.wikidata.org/wiki/Q438331","display_name":"Template","level":2,"score":0.9385676383972168},{"id":"https://openalex.org/C66153294","wikidata":"https://www.wikidata.org/wiki/Q899291","display_name":"CASP","level":4,"score":0.8875999450683594},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8113656044006348},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.6503141522407532},{"id":"https://openalex.org/C18051474","wikidata":"https://www.wikidata.org/wiki/Q899656","display_name":"Protein structure prediction","level":3,"score":0.5454436540603638},{"id":"https://openalex.org/C14166107","wikidata":"https://www.wikidata.org/wiki/Q253829","display_name":"Net (polyhedron)","level":2,"score":0.5184992551803589},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4122445285320282},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.3031861186027527},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.1688518524169922},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09518349170684814},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.08857515454292297},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btq664","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq664","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/3/426/48865445/bioinformatics_27_3_426.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:21149277","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21149277","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:DiVA.org:su-67495","is_oa":true,"landing_page_url":"http://urn.kb.se/resolve?urn=urn:nbn:se:su:diva-67495","pdf_url":null,"source":{"id":"https://openalex.org/S4306401559","display_name":"KTH Publication Database DiVA (KTH Royal Institute of Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3031036","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3031036","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btq664","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq664","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/27/3/426/48865445/bioinformatics_27_3_426.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320338368","display_name":"FP7 People: Marie-Curie Actions","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320338377","display_name":"FP7 Health","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2155233650.pdf","grobid_xml":"https://content.openalex.org/works/W2155233650.grobid-xml"},"referenced_works_count":11,"referenced_works":["https://openalex.org/W1965517743","https://openalex.org/W1966672737","https://openalex.org/W2009502487","https://openalex.org/W2011345135","https://openalex.org/W2062123114","https://openalex.org/W2065283382","https://openalex.org/W2106066024","https://openalex.org/W2110252279","https://openalex.org/W2123085274","https://openalex.org/W2145268834","https://openalex.org/W2158714788"],"related_works":["https://openalex.org/W2411847509","https://openalex.org/W2411998238","https://openalex.org/W2155233650","https://openalex.org/W3198923619","https://openalex.org/W2093959518","https://openalex.org/W2334085108","https://openalex.org/W3199799076","https://openalex.org/W2561391236","https://openalex.org/W1599064615","https://openalex.org/W2147472674"],"abstract_inverted_index":{"PconsM":[0],"is":[1],"freely":[2],"available":[3],"from":[4],"http://pcons.net/.":[5]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
