{"id":"https://openalex.org/W2148243717","doi":"https://doi.org/10.1093/bioinformatics/btq570","title":"A classification model for G-to-A hypermutation in hepatitis B virus ultra-deep pyrosequencing reads","display_name":"A classification model for G-to-A hypermutation in hepatitis B virus ultra-deep pyrosequencing reads","publication_year":2010,"publication_date":"2010-10-11","ids":{"openalex":"https://openalex.org/W2148243717","doi":"https://doi.org/10.1093/bioinformatics/btq570","mag":"2148243717","pmid":"https://pubmed.ncbi.nlm.nih.gov/20937597"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btq570","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq570","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/23/2929/48851458/bioinformatics_26_23_2929.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/26/23/2929/48851458/bioinformatics_26_23_2929.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5049851640","display_name":"Elizabeth C. Reuman","orcid":null},"institutions":[{"id":"https://openalex.org/I4210140816","display_name":"Gilead Sciences (United States)","ror":"https://ror.org/056546b03","country_code":"US","type":"company","lineage":["https://openalex.org/I4210140816"]},{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Elizabeth C. Reuman","raw_affiliation_strings":["1 Department of Medicine, Division of Infectious Diseases, Stanford University, Stanford, CA 94305, 2Gilead Sciences, Foster City, CA 94404 and 3Department of Statistics, Stanford University, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Medicine, Division of Infectious Diseases, Stanford University, Stanford, CA 94305, 2Gilead Sciences, Foster City, CA 94404 and 3Department of Statistics, Stanford University, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I4210140816","https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062746976","display_name":"Severine Margeridon\u2010Thermet","orcid":null},"institutions":[{"id":"https://openalex.org/I4210140816","display_name":"Gilead Sciences (United States)","ror":"https://ror.org/056546b03","country_code":"US","type":"company","lineage":["https://openalex.org/I4210140816"]},{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Severine Margeridon-Thermet","raw_affiliation_strings":["1 Department of Medicine, Division of Infectious Diseases, Stanford University, Stanford, CA 94305, 2Gilead Sciences, Foster City, CA 94404 and 3Department of Statistics, Stanford University, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Medicine, Division of Infectious Diseases, Stanford University, Stanford, CA 94305, 2Gilead Sciences, Foster City, CA 94404 and 3Department of Statistics, Stanford University, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I4210140816","https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083548882","display_name":"Harrison B. Caudill","orcid":null},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]},{"id":"https://openalex.org/I4210140816","display_name":"Gilead Sciences (United States)","ror":"https://ror.org/056546b03","country_code":"US","type":"company","lineage":["https://openalex.org/I4210140816"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Harrison B. Caudill","raw_affiliation_strings":["1 Department of Medicine, Division of Infectious Diseases, Stanford University, Stanford, CA 94305, 2Gilead Sciences, Foster City, CA 94404 and 3Department of Statistics, Stanford University, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Medicine, Division of Infectious Diseases, Stanford University, Stanford, CA 94305, 2Gilead Sciences, Foster City, CA 94404 and 3Department of Statistics, Stanford University, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I4210140816","https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055635325","display_name":"Tommy Liu","orcid":"https://orcid.org/0000-0003-4800-8418"},"institutions":[{"id":"https://openalex.org/I4210140816","display_name":"Gilead Sciences (United States)","ror":"https://ror.org/056546b03","country_code":"US","type":"company","lineage":["https://openalex.org/I4210140816"]},{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tommy Liu","raw_affiliation_strings":["1 Department of Medicine, Division of Infectious Diseases, Stanford University, Stanford, CA 94305, 2Gilead Sciences, Foster City, CA 94404 and 3Department of Statistics, Stanford University, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Medicine, Division of Infectious Diseases, Stanford University, Stanford, CA 94305, 2Gilead Sciences, Foster City, CA 94404 and 3Department of Statistics, Stanford University, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I4210140816","https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010901896","display_name":"Katyna Borroto\u2013Esoda","orcid":"https://orcid.org/0000-0002-3909-6578"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]},{"id":"https://openalex.org/I4210140816","display_name":"Gilead Sciences (United States)","ror":"https://ror.org/056546b03","country_code":"US","type":"company","lineage":["https://openalex.org/I4210140816"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Katyna Borroto-Esoda","raw_affiliation_strings":["1 Department of Medicine, Division of Infectious Diseases, Stanford University, Stanford, CA 94305, 2Gilead Sciences, Foster City, CA 94404 and 3Department of Statistics, Stanford University, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Medicine, Division of Infectious Diseases, Stanford University, Stanford, CA 94305, 2Gilead Sciences, Foster City, CA 94404 and 3Department of Statistics, Stanford University, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I4210140816","https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110167636","display_name":"Evguenia S. Svarovskaia","orcid":null},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]},{"id":"https://openalex.org/I4210140816","display_name":"Gilead Sciences (United States)","ror":"https://ror.org/056546b03","country_code":"US","type":"company","lineage":["https://openalex.org/I4210140816"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Evguenia S. Svarovskaia","raw_affiliation_strings":["1 Department of Medicine, Division of Infectious Diseases, Stanford University, Stanford, CA 94305, 2Gilead Sciences, Foster City, CA 94404 and 3Department of Statistics, Stanford University, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Medicine, Division of Infectious Diseases, Stanford University, Stanford, CA 94305, 2Gilead Sciences, Foster City, CA 94404 and 3Department of Statistics, Stanford University, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I4210140816","https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003674456","display_name":"Susan Holmes","orcid":"https://orcid.org/0000-0002-2208-8168"},"institutions":[{"id":"https://openalex.org/I4210140816","display_name":"Gilead Sciences (United States)","ror":"https://ror.org/056546b03","country_code":"US","type":"company","lineage":["https://openalex.org/I4210140816"]},{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Susan P. Holmes","raw_affiliation_strings":["1 Department of Medicine, Division of Infectious Diseases, Stanford University, Stanford, CA 94305, 2Gilead Sciences, Foster City, CA 94404 and 3Department of Statistics, Stanford University, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Medicine, Division of Infectious Diseases, Stanford University, Stanford, CA 94305, 2Gilead Sciences, Foster City, CA 94404 and 3Department of Statistics, Stanford University, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I4210140816","https://openalex.org/I97018004"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066628402","display_name":"Robert W. Shafer","orcid":"https://orcid.org/0000-0003-2513-2643"},"institutions":[{"id":"https://openalex.org/I4210140816","display_name":"Gilead Sciences (United States)","ror":"https://ror.org/056546b03","country_code":"US","type":"company","lineage":["https://openalex.org/I4210140816"]},{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert W. Shafer","raw_affiliation_strings":["1 Department of Medicine, Division of Infectious Diseases, Stanford University, Stanford, CA 94305, 2Gilead Sciences, Foster City, CA 94404 and 3Department of Statistics, Stanford University, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Medicine, Division of Infectious Diseases, Stanford University, Stanford, CA 94305, 2Gilead Sciences, Foster City, CA 94404 and 3Department of Statistics, Stanford University, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I4210140816","https://openalex.org/I97018004"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5049851640"],"corresponding_institution_ids":["https://openalex.org/I4210140816","https://openalex.org/I97018004"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.5199,"has_fulltext":false,"cited_by_count":17,"citation_normalized_percentile":{"value":0.83258347,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"26","issue":"23","first_page":"2929","last_page":"2932"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10340","display_name":"Hepatitis B Virus Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10340","display_name":"Hepatitis B Virus Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10151","display_name":"Hepatitis C virus research","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/2721","display_name":"Hepatology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10112","display_name":"HIV Research and Treatment","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/somatic-hypermutation","display_name":"Somatic hypermutation","score":0.8696261644363403},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7001477479934692},{"id":"https://openalex.org/keywords/deep-sequencing","display_name":"Deep sequencing","score":0.6755802631378174},{"id":"https://openalex.org/keywords/hepatitis-b-virus","display_name":"Hepatitis B virus","score":0.6563257575035095},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.6083757281303406},{"id":"https://openalex.org/keywords/pyrosequencing","display_name":"Pyrosequencing","score":0.5532177090644836},{"id":"https://openalex.org/keywords/mutation","display_name":"Mutation","score":0.507831871509552},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4939306378364563},{"id":"https://openalex.org/keywords/reverse-transcriptase","display_name":"Reverse transcriptase","score":0.4731256365776062},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.4440382719039917},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.43502774834632874},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.25290030241012573},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.23764660954475403},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.22935953736305237},{"id":"https://openalex.org/keywords/antibody","display_name":"Antibody","score":0.07473242282867432}],"concepts":[{"id":"https://openalex.org/C128526571","wikidata":"https://www.wikidata.org/wiki/Q619302","display_name":"Somatic hypermutation","level":4,"score":0.8696261644363403},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7001477479934692},{"id":"https://openalex.org/C132917006","wikidata":"https://www.wikidata.org/wiki/Q5250436","display_name":"Deep sequencing","level":4,"score":0.6755802631378174},{"id":"https://openalex.org/C2780593183","wikidata":"https://www.wikidata.org/wiki/Q6844","display_name":"Hepatitis B virus","level":3,"score":0.6563257575035095},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.6083757281303406},{"id":"https://openalex.org/C125009961","wikidata":"https://www.wikidata.org/wiki/Q2342248","display_name":"Pyrosequencing","level":3,"score":0.5532177090644836},{"id":"https://openalex.org/C501734568","wikidata":"https://www.wikidata.org/wiki/Q42918","display_name":"Mutation","level":3,"score":0.507831871509552},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4939306378364563},{"id":"https://openalex.org/C156719811","wikidata":"https://www.wikidata.org/wiki/Q28774","display_name":"Reverse transcriptase","level":4,"score":0.4731256365776062},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.4440382719039917},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.43502774834632874},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.25290030241012573},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.23764660954475403},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.22935953736305237},{"id":"https://openalex.org/C159654299","wikidata":"https://www.wikidata.org/wiki/Q79460","display_name":"Antibody","level":2,"score":0.07473242282867432},{"id":"https://openalex.org/C2778453870","wikidata":"https://www.wikidata.org/wiki/Q188930","display_name":"B cell","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000225","descriptor_name":"Adenine","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D000225","descriptor_name":"Adenine","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D000225","descriptor_name":"Adenine","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002965","descriptor_name":"Classification","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002965","descriptor_name":"Classification","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002965","descriptor_name":"Classification","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004252","descriptor_name":"DNA Mutational Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004252","descriptor_name":"DNA Mutational Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004252","descriptor_name":"DNA Mutational Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D006147","descriptor_name":"Guanine","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D006147","descriptor_name":"Guanine","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D006147","descriptor_name":"Guanine","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D006509","descriptor_name":"Hepatitis B","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D006509","descriptor_name":"Hepatitis B","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D006509","descriptor_name":"Hepatitis B","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D006515","descriptor_name":"Hepatitis B virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006515","descriptor_name":"Hepatitis B virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006515","descriptor_name":"Hepatitis B virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D024882","descriptor_name":"Drug Resistance, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D024882","descriptor_name":"Drug Resistance, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D024882","descriptor_name":"Drug Resistance, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btq570","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq570","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/23/2929/48851458/bioinformatics_26_23_2929.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20937597","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20937597","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.971.15","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.971.15","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.oxfordjournals.org/content/early/2010/10/11/bioinformatics.btq570.full.pdf","raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:2982158","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2982158","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btq570","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq570","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/23/2929/48851458/bioinformatics_26_23_2929.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.8299999833106995,"display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2148243717.pdf","grobid_xml":"https://content.openalex.org/works/W2148243717.grobid-xml"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W1876057216","https://openalex.org/W1972347042","https://openalex.org/W1996737758","https://openalex.org/W2001375348","https://openalex.org/W2007978409","https://openalex.org/W2016449892","https://openalex.org/W2049633694","https://openalex.org/W2053060446","https://openalex.org/W2055005462","https://openalex.org/W2069475314","https://openalex.org/W2076709337","https://openalex.org/W2113135059","https://openalex.org/W2113309729","https://openalex.org/W2118539769","https://openalex.org/W2120176508","https://openalex.org/W2148102806","https://openalex.org/W2148399664","https://openalex.org/W2154250614","https://openalex.org/W2164762627","https://openalex.org/W2418942149","https://openalex.org/W2419579577","https://openalex.org/W4205548518","https://openalex.org/W6718124852"],"related_works":["https://openalex.org/W2125409137","https://openalex.org/W4242524636","https://openalex.org/W2408737264","https://openalex.org/W1969457412","https://openalex.org/W2165802059","https://openalex.org/W1995436065","https://openalex.org/W1648713449","https://openalex.org/W2013628600","https://openalex.org/W2164762627","https://openalex.org/W2180948557"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2021,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":4}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}