{"id":"https://openalex.org/W2104515939","doi":"https://doi.org/10.1093/bioinformatics/btq549","title":"GLOOME: gain loss mapping engine","display_name":"GLOOME: gain loss mapping engine","publication_year":2010,"publication_date":"2010-09-27","ids":{"openalex":"https://openalex.org/W2104515939","doi":"https://doi.org/10.1093/bioinformatics/btq549","mag":"2104515939","pmid":"https://pubmed.ncbi.nlm.nih.gov/20876605"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btq549","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq549","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/22/2914/615103/btq549.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/26/22/2914/615103/btq549.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083324690","display_name":"Ofir Cohen","orcid":"https://orcid.org/0000-0002-0043-6838"},"institutions":[{"id":"https://openalex.org/I6002401","display_name":"National Evolutionary Synthesis Center","ror":"https://ror.org/001ykb961","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I6002401"]},{"id":"https://openalex.org/I16391192","display_name":"Tel Aviv University","ror":"https://ror.org/04mhzgx49","country_code":"IL","type":"education","lineage":["https://openalex.org/I16391192"]}],"countries":["IL","US"],"is_corresponding":true,"raw_author_name":"Ofir Cohen","raw_affiliation_strings":["1 Department of Cell Research and Immunology, 2Department of Zoology, Tel-Aviv University, Tel Aviv 69978, Israel and 3National Evolutionary Synthesis Center, 2024 W. Main Street, Suite A200 Durham, NC 27705-4667, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Cell Research and Immunology, 2Department of Zoology, Tel-Aviv University, Tel Aviv 69978, Israel and 3National Evolutionary Synthesis Center, 2024 W. Main Street, Suite A200 Durham, NC 27705-4667, USA","institution_ids":["https://openalex.org/I6002401","https://openalex.org/I16391192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057094793","display_name":"Haim Ashkenazy","orcid":"https://orcid.org/0000-0002-5079-4684"},"institutions":[{"id":"https://openalex.org/I6002401","display_name":"National Evolutionary Synthesis Center","ror":"https://ror.org/001ykb961","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I6002401"]},{"id":"https://openalex.org/I16391192","display_name":"Tel Aviv University","ror":"https://ror.org/04mhzgx49","country_code":"IL","type":"education","lineage":["https://openalex.org/I16391192"]}],"countries":["IL","US"],"is_corresponding":false,"raw_author_name":"Haim Ashkenazy","raw_affiliation_strings":["1 Department of Cell Research and Immunology, 2Department of Zoology, Tel-Aviv University, Tel Aviv 69978, Israel and 3National Evolutionary Synthesis Center, 2024 W. Main Street, Suite A200 Durham, NC 27705-4667, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Cell Research and Immunology, 2Department of Zoology, Tel-Aviv University, Tel Aviv 69978, Israel and 3National Evolutionary Synthesis Center, 2024 W. Main Street, Suite A200 Durham, NC 27705-4667, USA","institution_ids":["https://openalex.org/I6002401","https://openalex.org/I16391192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051730578","display_name":"Frida Belinky","orcid":"https://orcid.org/0000-0002-0857-0660"},"institutions":[{"id":"https://openalex.org/I6002401","display_name":"National Evolutionary Synthesis Center","ror":"https://ror.org/001ykb961","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I6002401"]},{"id":"https://openalex.org/I16391192","display_name":"Tel Aviv University","ror":"https://ror.org/04mhzgx49","country_code":"IL","type":"education","lineage":["https://openalex.org/I16391192"]}],"countries":["IL","US"],"is_corresponding":false,"raw_author_name":"Frida Belinky","raw_affiliation_strings":["1 Department of Cell Research and Immunology, 2Department of Zoology, Tel-Aviv University, Tel Aviv 69978, Israel and 3National Evolutionary Synthesis Center, 2024 W. Main Street, Suite A200 Durham, NC 27705-4667, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Cell Research and Immunology, 2Department of Zoology, Tel-Aviv University, Tel Aviv 69978, Israel and 3National Evolutionary Synthesis Center, 2024 W. Main Street, Suite A200 Durham, NC 27705-4667, USA","institution_ids":["https://openalex.org/I6002401","https://openalex.org/I16391192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073566021","display_name":"Doroth\u00e9e Huchon","orcid":"https://orcid.org/0000-0002-5047-244X"},"institutions":[{"id":"https://openalex.org/I6002401","display_name":"National Evolutionary Synthesis Center","ror":"https://ror.org/001ykb961","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I6002401"]},{"id":"https://openalex.org/I16391192","display_name":"Tel Aviv University","ror":"https://ror.org/04mhzgx49","country_code":"IL","type":"education","lineage":["https://openalex.org/I16391192"]}],"countries":["IL","US"],"is_corresponding":false,"raw_author_name":"Doroth\u00e9e Huchon","raw_affiliation_strings":["1 Department of Cell Research and Immunology, 2Department of Zoology, Tel-Aviv University, Tel Aviv 69978, Israel and 3National Evolutionary Synthesis Center, 2024 W. Main Street, Suite A200 Durham, NC 27705-4667, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Cell Research and Immunology, 2Department of Zoology, Tel-Aviv University, Tel Aviv 69978, Israel and 3National Evolutionary Synthesis Center, 2024 W. Main Street, Suite A200 Durham, NC 27705-4667, USA","institution_ids":["https://openalex.org/I6002401","https://openalex.org/I16391192"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5070736617","display_name":"Tal Pupko","orcid":"https://orcid.org/0000-0001-9463-2575"},"institutions":[{"id":"https://openalex.org/I16391192","display_name":"Tel Aviv University","ror":"https://ror.org/04mhzgx49","country_code":"IL","type":"education","lineage":["https://openalex.org/I16391192"]},{"id":"https://openalex.org/I6002401","display_name":"National Evolutionary Synthesis Center","ror":"https://ror.org/001ykb961","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I6002401"]}],"countries":["IL","US"],"is_corresponding":false,"raw_author_name":"Tal Pupko","raw_affiliation_strings":["1 Department of Cell Research and Immunology, 2Department of Zoology, Tel-Aviv University, Tel Aviv 69978, Israel and 3National Evolutionary Synthesis Center, 2024 W. Main Street, Suite A200 Durham, NC 27705-4667, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Cell Research and Immunology, 2Department of Zoology, Tel-Aviv University, Tel Aviv 69978, Israel and 3National Evolutionary Synthesis Center, 2024 W. Main Street, Suite A200 Durham, NC 27705-4667, USA","institution_ids":["https://openalex.org/I6002401","https://openalex.org/I16391192"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5083324690"],"corresponding_institution_ids":["https://openalex.org/I16391192","https://openalex.org/I6002401"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.6228,"has_fulltext":false,"cited_by_count":153,"citation_normalized_percentile":{"value":0.82921869,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"26","issue":"22","first_page":"2914","last_page":"2915"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.9882000088691711,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/indel","display_name":"Indel","score":0.8289971947669983},{"id":"https://openalex.org/keywords/phyletic-gradualism","display_name":"Phyletic gradualism","score":0.8208248615264893},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.6323797106742859},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5949442982673645},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.5403422117233276},{"id":"https://openalex.org/keywords/maximum-parsimony","display_name":"Maximum parsimony","score":0.4555947780609131},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.41949909925460815},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.39568591117858887},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3545788526535034},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3368779420852661},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1919764280319214},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.18134576082229614},{"id":"https://openalex.org/keywords/clade","display_name":"Clade","score":0.13944271206855774}],"concepts":[{"id":"https://openalex.org/C119054055","wikidata":"https://www.wikidata.org/wiki/Q1576681","display_name":"Indel","level":5,"score":0.8289971947669983},{"id":"https://openalex.org/C150078595","wikidata":"https://www.wikidata.org/wiki/Q1158802","display_name":"Phyletic gradualism","level":4,"score":0.8208248615264893},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.6323797106742859},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5949442982673645},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.5403422117233276},{"id":"https://openalex.org/C22799545","wikidata":"https://www.wikidata.org/wiki/Q1805805","display_name":"Maximum parsimony","level":5,"score":0.4555947780609131},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.41949909925460815},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.39568591117858887},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3545788526535034},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3368779420852661},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1919764280319214},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.18134576082229614},{"id":"https://openalex.org/C44465124","wikidata":"https://www.wikidata.org/wiki/Q713623","display_name":"Clade","level":4,"score":0.13944271206855774},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.0},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btq549","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq549","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/22/2914/615103/btq549.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20876605","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20876605","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btq549","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq549","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/22/2914/615103/btq549.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2104515939.pdf","grobid_xml":"https://content.openalex.org/works/W2104515939.grobid-xml"},"referenced_works_count":31,"referenced_works":["https://openalex.org/W1483942228","https://openalex.org/W1966972227","https://openalex.org/W1979618484","https://openalex.org/W1990014273","https://openalex.org/W2001363675","https://openalex.org/W2006274528","https://openalex.org/W2033233811","https://openalex.org/W2061140759","https://openalex.org/W2097706568","https://openalex.org/W2109363750","https://openalex.org/W2110332419","https://openalex.org/W2117884309","https://openalex.org/W2125393869","https://openalex.org/W2126424265","https://openalex.org/W2129147686","https://openalex.org/W2132886879","https://openalex.org/W2139265147","https://openalex.org/W2143361590","https://openalex.org/W2146058063","https://openalex.org/W2150941095","https://openalex.org/W2158216739","https://openalex.org/W2162136869","https://openalex.org/W2171403786","https://openalex.org/W2252961754","https://openalex.org/W2317907906","https://openalex.org/W4232936004","https://openalex.org/W4248740947","https://openalex.org/W4254304738","https://openalex.org/W6652004016","https://openalex.org/W6674647444","https://openalex.org/W6691754951"],"related_works":["https://openalex.org/W4247744373","https://openalex.org/W2896511299","https://openalex.org/W3014493306","https://openalex.org/W2015365367","https://openalex.org/W2520823390","https://openalex.org/W4300265711","https://openalex.org/W2963820820","https://openalex.org/W2963207658","https://openalex.org/W2375151634","https://openalex.org/W2090308851"],"abstract_inverted_index":{"Freely":[0],"available":[1],"for":[2],"use":[3],"at":[4],"http://gloome.tau.ac.il/.":[5]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":16},{"year":2023,"cited_by_count":14},{"year":2022,"cited_by_count":27},{"year":2021,"cited_by_count":13},{"year":2020,"cited_by_count":14},{"year":2019,"cited_by_count":7},{"year":2018,"cited_by_count":15},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":12},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":6},{"year":2012,"cited_by_count":3}],"updated_date":"2026-03-27T14:29:43.386196","created_date":"2025-10-10T00:00:00"}
