{"id":"https://openalex.org/W2171778773","doi":"https://doi.org/10.1093/bioinformatics/btq444","title":"Ultra-fast FFT protein docking on graphics processors","display_name":"Ultra-fast FFT protein docking on graphics processors","publication_year":2010,"publication_date":"2010-08-04","ids":{"openalex":"https://openalex.org/W2171778773","doi":"https://doi.org/10.1093/bioinformatics/btq444","mag":"2171778773","pmid":"https://pubmed.ncbi.nlm.nih.gov/20685958"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btq444","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq444","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/19/2398/16895428/btq444.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/26/19/2398/16895428/btq444.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5050082458","display_name":"David W. Ritchie","orcid":"https://orcid.org/0000-0002-0906-7354"},"institutions":[{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en informatique et en automatique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I4210121838","display_name":"Laboratoire Lorrain de Recherche en Informatique et ses Applications","ror":"https://ror.org/02vnf0c38","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I277688954","https://openalex.org/I4210107720","https://openalex.org/I4210121838","https://openalex.org/I4210159245","https://openalex.org/I90183372"]},{"id":"https://openalex.org/I4210127166","display_name":"Centre Inria de l'Universit\u00e9 de Lorraine","ror":"https://ror.org/03fcjvn64","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210127166"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"David W. Ritchie","raw_affiliation_strings":["INRIA Nancy\u2014Grand Est, LORIA, 615 Rue du Jardin Botanique, 54506 Vandoeuvre-l\u00e8s-Nancy, France"],"affiliations":[{"raw_affiliation_string":"INRIA Nancy\u2014Grand Est, LORIA, 615 Rue du Jardin Botanique, 54506 Vandoeuvre-l\u00e8s-Nancy, France","institution_ids":["https://openalex.org/I4210127166","https://openalex.org/I1326498283","https://openalex.org/I4210121838"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5091560329","display_name":"Vishwesh Venkatraman","orcid":"https://orcid.org/0000-0001-7609-2245"},"institutions":[{"id":"https://openalex.org/I4210121838","display_name":"Laboratoire Lorrain de Recherche en Informatique et ses Applications","ror":"https://ror.org/02vnf0c38","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I277688954","https://openalex.org/I4210107720","https://openalex.org/I4210121838","https://openalex.org/I4210159245","https://openalex.org/I90183372"]},{"id":"https://openalex.org/I4210127166","display_name":"Centre Inria de l'Universit\u00e9 de Lorraine","ror":"https://ror.org/03fcjvn64","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210127166"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en informatique et en automatique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1326498283"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Vishwesh Venkatraman","raw_affiliation_strings":["INRIA Nancy\u2014Grand Est, LORIA, 615 Rue du Jardin Botanique, 54506 Vandoeuvre-l\u00e8s-Nancy, France"],"affiliations":[{"raw_affiliation_string":"INRIA Nancy\u2014Grand Est, LORIA, 615 Rue du Jardin Botanique, 54506 Vandoeuvre-l\u00e8s-Nancy, France","institution_ids":["https://openalex.org/I4210127166","https://openalex.org/I1326498283","https://openalex.org/I4210121838"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5050082458"],"corresponding_institution_ids":["https://openalex.org/I1326498283","https://openalex.org/I4210121838","https://openalex.org/I4210127166"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":11.1144,"has_fulltext":true,"cited_by_count":372,"citation_normalized_percentile":{"value":0.99050232,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"26","issue":"19","first_page":"2398","last_page":"2405"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9879000186920166,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9767000079154968,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/fast-fourier-transform","display_name":"Fast Fourier transform","score":0.8549610376358032},{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.7242989540100098},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7043228149414062},{"id":"https://openalex.org/keywords/graphics","display_name":"Graphics","score":0.6375926733016968},{"id":"https://openalex.org/keywords/macromolecular-docking","display_name":"Macromolecular docking","score":0.6324615478515625},{"id":"https://openalex.org/keywords/computational-science","display_name":"Computational science","score":0.5752783417701721},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.4642670154571533},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.34006279706954956},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.28018152713775635},{"id":"https://openalex.org/keywords/molecular-dynamics","display_name":"Molecular dynamics","score":0.17139452695846558},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.15244024991989136},{"id":"https://openalex.org/keywords/computational-chemistry","display_name":"Computational chemistry","score":0.11118876934051514}],"concepts":[{"id":"https://openalex.org/C75172450","wikidata":"https://www.wikidata.org/wiki/Q623950","display_name":"Fast Fourier transform","level":2,"score":0.8549610376358032},{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.7242989540100098},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7043228149414062},{"id":"https://openalex.org/C21442007","wikidata":"https://www.wikidata.org/wiki/Q1027879","display_name":"Graphics","level":2,"score":0.6375926733016968},{"id":"https://openalex.org/C116887118","wikidata":"https://www.wikidata.org/wiki/Q836685","display_name":"Macromolecular docking","level":3,"score":0.6324615478515625},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.5752783417701721},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.4642670154571533},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.34006279706954956},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.28018152713775635},{"id":"https://openalex.org/C59593255","wikidata":"https://www.wikidata.org/wiki/Q901663","display_name":"Molecular dynamics","level":2,"score":0.17139452695846558},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.15244024991989136},{"id":"https://openalex.org/C147597530","wikidata":"https://www.wikidata.org/wiki/Q369472","display_name":"Computational chemistry","level":1,"score":0.11118876934051514},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005583","descriptor_name":"Fourier Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005583","descriptor_name":"Fourier Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005583","descriptor_name":"Fourier Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btq444","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq444","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/19/2398/16895428/btq444.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20685958","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20685958","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:HAL:inria-00537988v1","is_oa":false,"landing_page_url":"https://inria.hal.science/inria-00537988","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2010, 26 (19), pp.2398-2405. &#x27E8;10.1093/bioinformatics/btq444&#x27E9;","raw_type":"Journal articles"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btq444","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq444","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/19/2398/16895428/btq444.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G718789860","display_name":null,"funder_award_id":"ANR-08-CEXC-017-01","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320309480","display_name":"Nvidia","ror":"https://ror.org/03jdj4y14"},{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2171778773.pdf","grobid_xml":"https://content.openalex.org/works/W2171778773.grobid-xml"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W108098025","https://openalex.org/W1547749660","https://openalex.org/W1992558926","https://openalex.org/W2000383223","https://openalex.org/W2011652244","https://openalex.org/W2014744153","https://openalex.org/W2025730034","https://openalex.org/W2032309817","https://openalex.org/W2034834303","https://openalex.org/W2036000659","https://openalex.org/W2063980568","https://openalex.org/W2074104861","https://openalex.org/W2091734240","https://openalex.org/W2099907934","https://openalex.org/W2105438341","https://openalex.org/W2106210646","https://openalex.org/W2108157916","https://openalex.org/W2108600626","https://openalex.org/W2110585060","https://openalex.org/W2114927422","https://openalex.org/W2133712572","https://openalex.org/W2135731978","https://openalex.org/W2136485386","https://openalex.org/W2142485291","https://openalex.org/W2150056503","https://openalex.org/W2150399099","https://openalex.org/W2153731681","https://openalex.org/W2155417823","https://openalex.org/W2157991822","https://openalex.org/W2159497832","https://openalex.org/W2160223767","https://openalex.org/W2163462520","https://openalex.org/W2163809936","https://openalex.org/W2166621589","https://openalex.org/W2171249995","https://openalex.org/W2172108797","https://openalex.org/W2911830835","https://openalex.org/W4245970816","https://openalex.org/W6677100139"],"related_works":["https://openalex.org/W2110451206","https://openalex.org/W2358344120","https://openalex.org/W2606532257","https://openalex.org/W2164036348","https://openalex.org/W2098788135","https://openalex.org/W2156043935","https://openalex.org/W2160223767","https://openalex.org/W2103590153","https://openalex.org/W2171778773","https://openalex.org/W2106210646"],"abstract_inverted_index":{"http://hex.loria.fr/":[0],"and":[1],"http://hexserver.loria.fr/.":[2]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":11},{"year":2024,"cited_by_count":12},{"year":2023,"cited_by_count":15},{"year":2022,"cited_by_count":19},{"year":2021,"cited_by_count":29},{"year":2020,"cited_by_count":29},{"year":2019,"cited_by_count":40},{"year":2018,"cited_by_count":39},{"year":2017,"cited_by_count":21},{"year":2016,"cited_by_count":26},{"year":2015,"cited_by_count":23},{"year":2014,"cited_by_count":22},{"year":2013,"cited_by_count":39},{"year":2012,"cited_by_count":25}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
