{"id":"https://openalex.org/W2130430745","doi":"https://doi.org/10.1093/bioinformatics/btq415","title":"ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level","display_name":"ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level","publication_year":2010,"publication_date":"2010-08-02","ids":{"openalex":"https://openalex.org/W2130430745","doi":"https://doi.org/10.1093/bioinformatics/btq415","mag":"2130430745","pmid":"https://pubmed.ncbi.nlm.nih.gov/20679334"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btq415","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq415","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/18/2354/48858571/bioinformatics_26_18_2354.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/26/18/2354/48858571/bioinformatics_26_18_2354.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5018395535","display_name":"Philippe Rocca\u2010Serra","orcid":"https://orcid.org/0000-0001-9853-5668"},"institutions":[{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]},{"id":"https://openalex.org/I141816643","display_name":"Natural Environment Research Council","ror":"https://ror.org/02b5d8509","country_code":"GB","type":"government","lineage":["https://openalex.org/I141816643","https://openalex.org/I4210087105"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Philippe Rocca-Serra","raw_affiliation_strings":["1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany"],"affiliations":[{"raw_affiliation_string":"1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I141816643","https://openalex.org/I40120149","https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090339186","display_name":"Marco Brandizi","orcid":"https://orcid.org/0000-0002-5427-2496"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]},{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]},{"id":"https://openalex.org/I141816643","display_name":"Natural Environment Research Council","ror":"https://ror.org/02b5d8509","country_code":"GB","type":"government","lineage":["https://openalex.org/I141816643","https://openalex.org/I4210087105"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Marco Brandizi","raw_affiliation_strings":["1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany"],"affiliations":[{"raw_affiliation_string":"1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I141816643","https://openalex.org/I40120149","https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075052652","display_name":"Eamonn Maguire","orcid":"https://orcid.org/0000-0002-7277-7834"},"institutions":[{"id":"https://openalex.org/I141816643","display_name":"Natural Environment Research Council","ror":"https://ror.org/02b5d8509","country_code":"GB","type":"government","lineage":["https://openalex.org/I141816643","https://openalex.org/I4210087105"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Eamonn Maguire","raw_affiliation_strings":["1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany"],"affiliations":[{"raw_affiliation_string":"1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I141816643","https://openalex.org/I40120149","https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063731882","display_name":"Nataliya Sklyar","orcid":null},"institutions":[{"id":"https://openalex.org/I141816643","display_name":"Natural Environment Research Council","ror":"https://ror.org/02b5d8509","country_code":"GB","type":"government","lineage":["https://openalex.org/I141816643","https://openalex.org/I4210087105"]},{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Nataliya Sklyar","raw_affiliation_strings":["1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany"],"affiliations":[{"raw_affiliation_string":"1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I141816643","https://openalex.org/I40120149","https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075874654","display_name":"Chris Taylor","orcid":"https://orcid.org/0000-0002-9666-798X"},"institutions":[{"id":"https://openalex.org/I141816643","display_name":"Natural Environment Research Council","ror":"https://ror.org/02b5d8509","country_code":"GB","type":"government","lineage":["https://openalex.org/I141816643","https://openalex.org/I4210087105"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]},{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Chris Taylor","raw_affiliation_strings":["1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany"],"affiliations":[{"raw_affiliation_string":"1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I141816643","https://openalex.org/I40120149","https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108079055","display_name":"Kimberly Begley","orcid":"https://orcid.org/0000-0002-1642-7493"},"institutions":[{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]},{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I141816643","display_name":"Natural Environment Research Council","ror":"https://ror.org/02b5d8509","country_code":"GB","type":"government","lineage":["https://openalex.org/I141816643","https://openalex.org/I4210087105"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Kimberly Begley","raw_affiliation_strings":["1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany"],"affiliations":[{"raw_affiliation_string":"1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I141816643","https://openalex.org/I40120149","https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068248399","display_name":"Dawn Field","orcid":null},"institutions":[{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]},{"id":"https://openalex.org/I141816643","display_name":"Natural Environment Research Council","ror":"https://ror.org/02b5d8509","country_code":"GB","type":"government","lineage":["https://openalex.org/I141816643","https://openalex.org/I4210087105"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Dawn Field","raw_affiliation_strings":["1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany"],"affiliations":[{"raw_affiliation_string":"1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I141816643","https://openalex.org/I40120149","https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102982187","display_name":"Stephen Harris","orcid":"https://orcid.org/0009-0006-8660-5597"},"institutions":[{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]},{"id":"https://openalex.org/I141816643","display_name":"Natural Environment Research Council","ror":"https://ror.org/02b5d8509","country_code":"GB","type":"government","lineage":["https://openalex.org/I141816643","https://openalex.org/I4210087105"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Stephen Harris","raw_affiliation_strings":["1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany"],"affiliations":[{"raw_affiliation_string":"1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I141816643","https://openalex.org/I40120149","https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051775367","display_name":"Yoshihide Hayashizaki","orcid":"https://orcid.org/0000-0002-8621-3271"},"institutions":[{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]},{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]},{"id":"https://openalex.org/I141816643","display_name":"Natural Environment Research Council","ror":"https://ror.org/02b5d8509","country_code":"GB","type":"government","lineage":["https://openalex.org/I141816643","https://openalex.org/I4210087105"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Winston Hide","raw_affiliation_strings":["1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany"],"affiliations":[{"raw_affiliation_string":"1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I141816643","https://openalex.org/I40120149","https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080048082","display_name":"Oliver Hofmann","orcid":"https://orcid.org/0000-0002-7738-1513"},"institutions":[{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]},{"id":"https://openalex.org/I141816643","display_name":"Natural Environment Research Council","ror":"https://ror.org/02b5d8509","country_code":"GB","type":"government","lineage":["https://openalex.org/I141816643","https://openalex.org/I4210087105"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Oliver Hofmann","raw_affiliation_strings":["1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany"],"affiliations":[{"raw_affiliation_string":"1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I141816643","https://openalex.org/I40120149","https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038786156","display_name":"Steffen Neumann","orcid":"https://orcid.org/0000-0002-7899-7192"},"institutions":[{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]},{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I141816643","display_name":"Natural Environment Research Council","ror":"https://ror.org/02b5d8509","country_code":"GB","type":"government","lineage":["https://openalex.org/I141816643","https://openalex.org/I4210087105"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Steffen Neumann","raw_affiliation_strings":["1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany"],"affiliations":[{"raw_affiliation_string":"1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I141816643","https://openalex.org/I40120149","https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000103333","display_name":"Peter Sterk","orcid":"https://orcid.org/0000-0003-1668-7778"},"institutions":[{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I141816643","display_name":"Natural Environment Research Council","ror":"https://ror.org/02b5d8509","country_code":"GB","type":"government","lineage":["https://openalex.org/I141816643","https://openalex.org/I4210087105"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Peter Sterk","raw_affiliation_strings":["1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany"],"affiliations":[{"raw_affiliation_string":"1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I141816643","https://openalex.org/I40120149","https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068886380","display_name":"Weida Tong","orcid":"https://orcid.org/0000-0003-3488-6148"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]},{"id":"https://openalex.org/I141816643","display_name":"Natural Environment Research Council","ror":"https://ror.org/02b5d8509","country_code":"GB","type":"government","lineage":["https://openalex.org/I141816643","https://openalex.org/I4210087105"]},{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Weida Tong","raw_affiliation_strings":["1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany"],"affiliations":[{"raw_affiliation_string":"1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I141816643","https://openalex.org/I40120149","https://openalex.org/I1303153112"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5008806860","display_name":"Susanna\u2010Assunta Sansone","orcid":"https://orcid.org/0000-0001-5306-5690"},"institutions":[{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I141816643","display_name":"Natural Environment Research Council","ror":"https://ror.org/02b5d8509","country_code":"GB","type":"government","lineage":["https://openalex.org/I141816643","https://openalex.org/I4210087105"]},{"id":"https://openalex.org/I2802476451","display_name":"Wellcome Sanger Institute","ror":"https://ror.org/05cy4wa09","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2802476451","https://openalex.org/I87048295"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Susanna-Assunta Sansone","raw_affiliation_strings":["1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany"],"affiliations":[{"raw_affiliation_string":"1 The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD and 2Oxford e-Research Centre, University of Oxford, 7 Keble Road, Oxford OX1 3QG, 3Natural Environment Research Council, Environmental Bioinformatics Centre, Wallingford CEH, Benson Lane, Mansfield Road, Oxford OX10 8BB, UK, 4Harvard School of Public Health, 677 Huntington Avenue, Boston, MA 02115, USA, 5Genomic Standards Consortium, Wellcome Trust Sanger Institute, Cambridge CB10 1SD, UK, 6US Food and Drug Administration, Center for Bioinformatics, National Center for Toxicological Research, 3900 NCTR Road, Jefferson, AR 72079, USA and 7Leibniz Institute of Plant Biochemistry, Department of Stress and Developmental Biology, Weinberg 3, 06120 Halle, Germany","institution_ids":["https://openalex.org/I2802476451","https://openalex.org/I141816643","https://openalex.org/I40120149","https://openalex.org/I1303153112"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":14,"corresponding_author_ids":["https://openalex.org/A5018395535"],"corresponding_institution_ids":["https://openalex.org/I1303153112","https://openalex.org/I141816643","https://openalex.org/I2802476451","https://openalex.org/I40120149"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":10.7916,"has_fulltext":true,"cited_by_count":297,"citation_normalized_percentile":{"value":0.99012733,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"26","issue":"18","first_page":"2354","last_page":"2356"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9915000200271606,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9726999998092651,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/suite","display_name":"Suite","score":0.8786536455154419},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.7764609456062317},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.7533440589904785},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7268933057785034},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.704862117767334},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.6624429821968079},{"id":"https://openalex.org/keywords/software-suite","display_name":"Software suite","score":0.6137058138847351},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.5223325490951538},{"id":"https://openalex.org/keywords/implementation","display_name":"Implementation","score":0.47511371970176697},{"id":"https://openalex.org/keywords/data-curation","display_name":"Data curation","score":0.43934231996536255},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.43269628286361694},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3696432411670685},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.13115885853767395}],"concepts":[{"id":"https://openalex.org/C79581498","wikidata":"https://www.wikidata.org/wiki/Q1367530","display_name":"Suite","level":2,"score":0.8786536455154419},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.7764609456062317},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.7533440589904785},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7268933057785034},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.704862117767334},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.6624429821968079},{"id":"https://openalex.org/C2778736646","wikidata":"https://www.wikidata.org/wiki/Q1143070","display_name":"Software suite","level":3,"score":0.6137058138847351},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.5223325490951538},{"id":"https://openalex.org/C26713055","wikidata":"https://www.wikidata.org/wiki/Q245962","display_name":"Implementation","level":2,"score":0.47511371970176697},{"id":"https://openalex.org/C91632574","wikidata":"https://www.wikidata.org/wiki/Q15088675","display_name":"Data curation","level":2,"score":0.43934231996536255},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.43269628286361694},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3696432411670685},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.13115885853767395},{"id":"https://openalex.org/C95457728","wikidata":"https://www.wikidata.org/wiki/Q309","display_name":"History","level":0,"score":0.0},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.0},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057189","descriptor_name":"Checklist","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057189","descriptor_name":"Checklist","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057189","descriptor_name":"Checklist","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057189","descriptor_name":"Checklist","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057189","descriptor_name":"Checklist","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1093/bioinformatics/btq415","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq415","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/18/2354/48858571/bioinformatics_26_18_2354.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20679334","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20679334","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:eprints.whiterose.ac.uk:97913","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306400854","display_name":"White Rose Research Online (University of Leeds, The University of Sheffield, University of York)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2800616092","host_organization_name":"White Rose University Consortium","host_organization_lineage":["https://openalex.org/I2800616092"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:jupiter.its.unimelb.edu.au:11343/259614","is_oa":true,"landing_page_url":"http://hdl.handle.net/11343/259614","pdf_url":"http://hdl.handle.net/11343/259614","source":{"id":"https://openalex.org/S4377196259","display_name":"Minerva Access (University of Melbourne)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I165779595","host_organization_name":"The University of Melbourne","host_organization_lineage":["https://openalex.org/I165779595"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Conference Paper"},{"id":"pmh:oai:nora.nerc.ac.uk:12864","is_oa":false,"landing_page_url":"http://bioinformatics.oxfordjournals.org/content/26/18/2354.short","pdf_url":null,"source":{"id":"https://openalex.org/S4306400758","display_name":"NERC Open Research Archive (Natural Environment Research Council)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I141816643","host_organization_name":"Natural Environment Research Council","host_organization_lineage":["https://openalex.org/I141816643"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Publication - Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2935443","is_oa":true,"landing_page_url":"http://doi.org/10.1093/bioinformatics/btq415","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btq415","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq415","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/18/2354/48858571/bioinformatics_26_18_2354.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals","score":0.550000011920929}],"awards":[{"id":"https://openalex.org/G2184636786","display_name":null,"funder_award_id":"BB/G000638/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G412979241","display_name":null,"funder_award_id":"BB/I000771/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G613084890","display_name":null,"funder_award_id":"BB/I000917/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G7775520706","display_name":null,"funder_award_id":"BB/E025080/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320310703","display_name":"NERC Environmental Bioinformatics Centre","ror":"https://ror.org/03rjhjc18"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"},{"id":"https://openalex.org/F4320334631","display_name":"Natural Environment Research Council","ror":"https://ror.org/02b5d8509"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2130430745.pdf","grobid_xml":"https://content.openalex.org/works/W2130430745.grobid-xml"},"referenced_works_count":18,"referenced_works":["https://openalex.org/W1871852719","https://openalex.org/W1963542257","https://openalex.org/W2025891673","https://openalex.org/W2050554833","https://openalex.org/W2084115201","https://openalex.org/W2091940856","https://openalex.org/W2108671185","https://openalex.org/W2113142309","https://openalex.org/W2129301079","https://openalex.org/W2130542009","https://openalex.org/W2131660156","https://openalex.org/W2134733878","https://openalex.org/W2138563170","https://openalex.org/W2145241604","https://openalex.org/W2148592476","https://openalex.org/W2163323773","https://openalex.org/W2168546553","https://openalex.org/W2401480729"],"related_works":["https://openalex.org/W1516095885","https://openalex.org/W4231704780","https://openalex.org/W2158573927","https://openalex.org/W2108921801","https://openalex.org/W1981336497","https://openalex.org/W4206079007","https://openalex.org/W2082577974","https://openalex.org/W2398058485","https://openalex.org/W2169425537","https://openalex.org/W254965819"],"abstract_inverted_index":{"Software,":[0],"documentation,":[1],"case":[2],"studies":[3],"and":[4],"implementations":[5],"at":[6],"http://www.isa-tools.org.":[7]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":16},{"year":2021,"cited_by_count":18},{"year":2020,"cited_by_count":20},{"year":2019,"cited_by_count":23},{"year":2018,"cited_by_count":16},{"year":2017,"cited_by_count":22},{"year":2016,"cited_by_count":18},{"year":2015,"cited_by_count":32},{"year":2014,"cited_by_count":26},{"year":2013,"cited_by_count":18},{"year":2012,"cited_by_count":27}],"updated_date":"2026-03-06T13:50:29.536080","created_date":"2025-10-10T00:00:00"}