{"id":"https://openalex.org/W2119902463","doi":"https://doi.org/10.1093/bioinformatics/btq299","title":"cBar: a computer program to distinguish plasmid-derived from chromosome-derived sequence fragments in metagenomics data","display_name":"cBar: a computer program to distinguish plasmid-derived from chromosome-derived sequence fragments in metagenomics data","publication_year":2010,"publication_date":"2010-06-11","ids":{"openalex":"https://openalex.org/W2119902463","doi":"https://doi.org/10.1093/bioinformatics/btq299","mag":"2119902463","pmid":"https://pubmed.ncbi.nlm.nih.gov/20538725"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btq299","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq299","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/16/2051/48855079/bioinformatics_26_16_2051.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/26/16/2051/48855079/bioinformatics_26_16_2051.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5058786170","display_name":"Fengfeng Zhou","orcid":"https://orcid.org/0000-0002-8108-6007"},"institutions":[{"id":"https://openalex.org/I165733156","display_name":"University of Georgia","ror":"https://ror.org/00te3t702","country_code":"US","type":"education","lineage":["https://openalex.org/I165733156"]},{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Fengfeng Zhou","raw_affiliation_strings":["1 Computational Systems Biology Laboratory, Department of Biochemistry and Molecular Biology, and Institute of Bioinformatics, and BioEnergy Science Center (BESC), University of Georgia, Athens, GA 30602, USA and 2College of Computer Science and Technology, Jilin University, Changchun, Jilin 130012, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Computational Systems Biology Laboratory, Department of Biochemistry and Molecular Biology, and Institute of Bioinformatics, and BioEnergy Science Center (BESC), University of Georgia, Athens, GA 30602, USA and 2College of Computer Science and Technology, Jilin University, Changchun, Jilin 130012, China","institution_ids":["https://openalex.org/I165733156","https://openalex.org/I194450716"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5020171946","display_name":"Ying Xu","orcid":"https://orcid.org/0000-0002-7856-3343"},"institutions":[{"id":"https://openalex.org/I165733156","display_name":"University of Georgia","ror":"https://ror.org/00te3t702","country_code":"US","type":"education","lineage":["https://openalex.org/I165733156"]},{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]}],"countries":["CN","US"],"is_corresponding":true,"raw_author_name":"Ying Xu","raw_affiliation_strings":["1 Computational Systems Biology Laboratory, Department of Biochemistry and Molecular Biology, and Institute of Bioinformatics, and BioEnergy Science Center (BESC), University of Georgia, Athens, GA 30602, USA and 2College of Computer Science and Technology, Jilin University, Changchun, Jilin 130012, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Computational Systems Biology Laboratory, Department of Biochemistry and Molecular Biology, and Institute of Bioinformatics, and BioEnergy Science Center (BESC), University of Georgia, Athens, GA 30602, USA and 2College of Computer Science and Technology, Jilin University, Changchun, Jilin 130012, China","institution_ids":["https://openalex.org/I165733156","https://openalex.org/I194450716"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5020171946"],"corresponding_institution_ids":["https://openalex.org/I165733156","https://openalex.org/I194450716"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.3734,"has_fulltext":true,"cited_by_count":125,"citation_normalized_percentile":{"value":0.60702669,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"26","issue":"16","first_page":"2051","last_page":"2052"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.3416999876499176,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.3416999876499176,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.15410000085830688,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.14030000567436218,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/plasmid","display_name":"Plasmid","score":0.8635929822921753},{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.8215999603271484},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6038780212402344},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5530855059623718},{"id":"https://openalex.org/keywords/bacterial-artificial-chromosome","display_name":"Bacterial artificial chromosome","score":0.5372313261032104},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.535814106464386},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5328251719474792},{"id":"https://openalex.org/keywords/chromosome","display_name":"Chromosome","score":0.48766958713531494},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.44537004828453064},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.4367482662200928},{"id":"https://openalex.org/keywords/crispr","display_name":"CRISPR","score":0.4335048198699951},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3849392533302307},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.32732176780700684},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.061476945877075195}],"concepts":[{"id":"https://openalex.org/C22744801","wikidata":"https://www.wikidata.org/wiki/Q172778","display_name":"Plasmid","level":3,"score":0.8635929822921753},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.8215999603271484},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6038780212402344},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5530855059623718},{"id":"https://openalex.org/C182901222","wikidata":"https://www.wikidata.org/wiki/Q419061","display_name":"Bacterial artificial chromosome","level":4,"score":0.5372313261032104},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.535814106464386},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5328251719474792},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.48766958713531494},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.44537004828453064},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4367482662200928},{"id":"https://openalex.org/C98108389","wikidata":"https://www.wikidata.org/wiki/Q412563","display_name":"CRISPR","level":3,"score":0.4335048198699951},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3849392533302307},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.32732176780700684},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.061476945877075195}],"mesh":[{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002875","descriptor_name":"Chromosomes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002875","descriptor_name":"Chromosomes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002875","descriptor_name":"Chromosomes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010957","descriptor_name":"Plasmids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010957","descriptor_name":"Plasmids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010957","descriptor_name":"Plasmids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/btq299","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq299","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/16/2051/48855079/bioinformatics_26_16_2051.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20538725","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20538725","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:osti.gov:1625269","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1625269","pdf_url":"https://www.osti.gov/servlets/purl/1625269","source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:repositorio.unal.edu.co:unal/81811","is_oa":true,"landing_page_url":"https://repositorio.unal.edu.co/handle/unal/81811","pdf_url":null,"source":{"id":"https://openalex.org/S4306402641","display_name":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Cient\u00edficas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4383465926","host_organization_name":"LA Referencia","host_organization_lineage":["https://openalex.org/I4383465926"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"reponame:Repositorio UN","raw_type":"info:eu-repo/semantics/masterThesis"},{"id":"pmh:oai:pubmedcentral.nih.gov:2916713","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2916713","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btq299","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq299","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/16/2051/48855079/bioinformatics_26_16_2051.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17","score":0.4399999976158142}],"awards":[{"id":"https://openalex.org/G1338833578","display_name":null,"funder_award_id":"R01 GM081682","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G1451684857","display_name":null,"funder_award_id":"1R01GM075331","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G2954911513","display_name":null,"funder_award_id":"ITR-IIS-0407204","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3361450259","display_name":null,"funder_award_id":"1R01GM081682","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3375237257","display_name":null,"funder_award_id":"CCF0621700","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3415764617","display_name":null,"funder_award_id":"1R01GM081682","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G3453259917","display_name":null,"funder_award_id":"DBI-0354771","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G4553899723","display_name":null,"funder_award_id":"R01 GM075331","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G4883808398","display_name":null,"funder_award_id":"DBI-0542119","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G5864136272","display_name":"ITR Collaborative Research:  Combinatorial Algorithms for Biological Data Clustering","funder_award_id":"0407204","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6425796205","display_name":null,"funder_award_id":"1R01GM075331","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7137655021","display_name":"Computational Prediction of Biological Networks in Microbes and Applications to Cyanobacteria","funder_award_id":"0542119","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7168705754","display_name":"A Computational Capability for Fast and Reliable Characterization of Protein Complexes","funder_award_id":"0354771","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306084","display_name":"U.S. Department of Energy","ror":"https://ror.org/01bj3aw27"},{"id":"https://openalex.org/F4320306352","display_name":"Georgia Cancer Coalition","ror":"https://ror.org/0009gvn90"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332359","display_name":"Office of Science","ror":"https://ror.org/00mmn6b08"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337509","display_name":"Biological and Environmental Research","ror":"https://ror.org/0114b2m14"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":11,"referenced_works":["https://openalex.org/W2000190756","https://openalex.org/W2009333383","https://openalex.org/W2029437806","https://openalex.org/W2078805723","https://openalex.org/W2106393550","https://openalex.org/W2106651224","https://openalex.org/W2109553965","https://openalex.org/W2135893370","https://openalex.org/W2138987249","https://openalex.org/W2141677147","https://openalex.org/W2163352587"],"related_works":["https://openalex.org/W4293199045","https://openalex.org/W2405656580","https://openalex.org/W2642604616","https://openalex.org/W3162049976","https://openalex.org/W4381712632","https://openalex.org/W3163009052","https://openalex.org/W3029656231","https://openalex.org/W3116547599","https://openalex.org/W2409842116","https://openalex.org/W779974608"],"abstract_inverted_index":{"SUMMARY:":[0],"Huge":[1],"amount":[2],"of":[3,13,35,52,71,85,106,126],"metagenomic":[4],"sequence":[5,39,130],"data":[6],"have":[7],"been":[8,164],"produced":[9],"as":[10,23,56,166],"a":[11,24,77,81,86,101,123,149,167],"result":[12],"the":[14,67,108,114,139,154],"rapidly":[15],"increasing":[16],"efforts":[17],"worldwide":[18],"in":[19,76,119],"studying":[20],"microbial":[21],"communities":[22],"whole.":[25],"Most,":[26],"if":[27],"not":[28],"all,":[29],"sequenced":[30,109],"metagenomes":[31,128],"are":[32,58],"complex":[33],"mixtures":[34],"chromosomal":[36,72,90],"and":[37,63,91,112],"plasmid":[38,74,92],"fragments":[40],"from":[41,45,73,133,144],"multiple":[42],"organisms,":[43],"possibly":[44],"different":[46,60],"kingdoms.":[47],"Computational":[48],"methods":[49],"for":[50,61,69,83],"prediction":[51,169],"genomic":[53],"elements":[54],"such":[55],"genes":[57],"significantly":[59],"chromosomes":[62,111],"plasmids,":[64,113],"hence":[65],"raising":[66],"need":[68],"separation":[70],"sequences":[75],"metagenome.":[78],"We":[79],"present":[80],"program":[82,115,140,155,162],"classification":[84,120,142,158],"metagenome":[87],"set":[88,104,125],"into":[89],"sequences,":[93],"based":[94],"on":[95],"their":[96],"distinguishing":[97],"pentamer":[98],"frequencies.":[99],"On":[100,122,148],"large":[102,124,150],"training":[103],"consisting":[105],"all":[107],"prokaryotic":[110],"achieves":[116,156],"approximately":[117],"92%":[118],"accuracy.":[121,159],"simulated":[127],"with":[129],"lengths":[131],"ranging":[132],"300":[134],"bp":[135],"to":[136,146],"100":[137],"kbp,":[138],"has":[141,163],"accuracy":[143],"64.45%":[145],"88.75%.":[147],"independent":[151],"test":[152],"set,":[153],"88.29%":[157],"AVAILABILITY:":[160],"The":[161],"implemented":[165],"standalone":[168],"program,":[170],"cBar,":[171],"which":[172],"is":[173],"available":[174],"at":[175],"http://csbl.bmb.uga.edu/~ffzhou/cBar.":[176]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":10},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":14},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":22},{"year":2020,"cited_by_count":24},{"year":2019,"cited_by_count":9},{"year":2018,"cited_by_count":9},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
