{"id":"https://openalex.org/W2148072853","doi":"https://doi.org/10.1093/bioinformatics/btq015","title":"Random distance dependent attachment as a model for neural network generation in the <i>Caenorhabditis elegans</i>","display_name":"Random distance dependent attachment as a model for neural network generation in the <i>Caenorhabditis elegans</i>","publication_year":2010,"publication_date":"2010-01-16","ids":{"openalex":"https://openalex.org/W2148072853","doi":"https://doi.org/10.1093/bioinformatics/btq015","mag":"2148072853","pmid":"https://pubmed.ncbi.nlm.nih.gov/20081220"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btq015","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq015","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/5/647/48860375/bioinformatics_26_5_647.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/26/5/647/48860375/bioinformatics_26_5_647.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053233140","display_name":"Royi Itzhack","orcid":null},"institutions":[{"id":"https://openalex.org/I13955877","display_name":"Bar-Ilan University","ror":"https://ror.org/03kgsv495","country_code":"IL","type":"education","lineage":["https://openalex.org/I13955877"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Royi Itzhack","raw_affiliation_strings":["1 Math Department and 2 Gonda Brain Research Center, Bar Ilan University, Ramat Gan 52900, Israel"],"affiliations":[{"raw_affiliation_string":"1 Math Department and 2 Gonda Brain Research Center, Bar Ilan University, Ramat Gan 52900, Israel","institution_ids":["https://openalex.org/I13955877"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5083239943","display_name":"Yoram Louzoun","orcid":"https://orcid.org/0000-0003-1714-6148"},"institutions":[{"id":"https://openalex.org/I13955877","display_name":"Bar-Ilan University","ror":"https://ror.org/03kgsv495","country_code":"IL","type":"education","lineage":["https://openalex.org/I13955877"]}],"countries":["IL"],"is_corresponding":true,"raw_author_name":"Yoram Louzoun","raw_affiliation_strings":["1 Math Department and 2 Gonda Brain Research Center, Bar Ilan University, Ramat Gan 52900, Israel"],"affiliations":[{"raw_affiliation_string":"1 Math Department and 2 Gonda Brain Research Center, Bar Ilan University, Ramat Gan 52900, Israel","institution_ids":["https://openalex.org/I13955877"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5083239943"],"corresponding_institution_ids":["https://openalex.org/I13955877"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.3609,"has_fulltext":false,"cited_by_count":10,"citation_normalized_percentile":{"value":0.54526749,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"26","issue":"5","first_page":"647","last_page":"652"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10676","display_name":"Genetics, Aging, and Longevity in Model Organisms","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1302","display_name":"Aging"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10676","display_name":"Genetics, Aging, and Longevity in Model Organisms","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1302","display_name":"Aging"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13377","display_name":"Ecosystem dynamics and resilience","score":0.920799970626831,"subfield":{"id":"https://openalex.org/subfields/2306","display_name":"Global and Planetary Change"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/caenorhabditis-elegans","display_name":"Caenorhabditis elegans","score":0.9431041479110718},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.6123356819152832},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5772261023521423},{"id":"https://openalex.org/keywords/caenorhabditis","display_name":"Caenorhabditis","score":0.5028349757194519},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3870706558227539},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3466305136680603},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2113390862941742},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.11526098847389221}],"concepts":[{"id":"https://openalex.org/C2778944004","wikidata":"https://www.wikidata.org/wiki/Q91703","display_name":"Caenorhabditis elegans","level":3,"score":0.9431041479110718},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.6123356819152832},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5772261023521423},{"id":"https://openalex.org/C2776496032","wikidata":"https://www.wikidata.org/wiki/Q1904768","display_name":"Caenorhabditis","level":4,"score":0.5028349757194519},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3870706558227539},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3466305136680603},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2113390862941742},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.11526098847389221}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008959","descriptor_name":"Models, Neurological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008959","descriptor_name":"Models, Neurological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008959","descriptor_name":"Models, Neurological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009415","descriptor_name":"Nerve Net","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D009415","descriptor_name":"Nerve Net","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D009415","descriptor_name":"Nerve Net","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D009474","descriptor_name":"Neurons","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btq015","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq015","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/5/647/48860375/bioinformatics_26_5_647.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20081220","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20081220","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btq015","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btq015","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/5/647/48860375/bioinformatics_26_5_647.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2148072853.pdf","grobid_xml":"https://content.openalex.org/works/W2148072853.grobid-xml"},"referenced_works_count":79,"referenced_works":["https://openalex.org/W159496740","https://openalex.org/W584762224","https://openalex.org/W1516237456","https://openalex.org/W1530744856","https://openalex.org/W1532017810","https://openalex.org/W1598503391","https://openalex.org/W1897638147","https://openalex.org/W1904905451","https://openalex.org/W1967508302","https://openalex.org/W1968941013","https://openalex.org/W1971614393","https://openalex.org/W1973088705","https://openalex.org/W1974049455","https://openalex.org/W1974753375","https://openalex.org/W1976969221","https://openalex.org/W1981393359","https://openalex.org/W1985738573","https://openalex.org/W1986117906","https://openalex.org/W1986356875","https://openalex.org/W1988878611","https://openalex.org/W1991392533","https://openalex.org/W1993650636","https://openalex.org/W1993673892","https://openalex.org/W1994789528","https://openalex.org/W1995907191","https://openalex.org/W1999339751","https://openalex.org/W2006038621","https://openalex.org/W2008620264","https://openalex.org/W2009281907","https://openalex.org/W2011483175","https://openalex.org/W2018049970","https://openalex.org/W2020892390","https://openalex.org/W2029457239","https://openalex.org/W2030043539","https://openalex.org/W2047317860","https://openalex.org/W2047579925","https://openalex.org/W2052970238","https://openalex.org/W2057680921","https://openalex.org/W2059007857","https://openalex.org/W2064986432","https://openalex.org/W2071887987","https://openalex.org/W2073560591","https://openalex.org/W2078393476","https://openalex.org/W2081499475","https://openalex.org/W2085966286","https://openalex.org/W2090281870","https://openalex.org/W2092195987","https://openalex.org/W2102701326","https://openalex.org/W2104085672","https://openalex.org/W2109273473","https://openalex.org/W2112090702","https://openalex.org/W2113287822","https://openalex.org/W2118873240","https://openalex.org/W2122124368","https://openalex.org/W2124533460","https://openalex.org/W2133753342","https://openalex.org/W2144885342","https://openalex.org/W2147569252","https://openalex.org/W2153624566","https://openalex.org/W2156561332","https://openalex.org/W2158299803","https://openalex.org/W2160244003","https://openalex.org/W2160494616","https://openalex.org/W2162207305","https://openalex.org/W2164563833","https://openalex.org/W2165724176","https://openalex.org/W2167178615","https://openalex.org/W2167650166","https://openalex.org/W2171707538","https://openalex.org/W2465506968","https://openalex.org/W2799004609","https://openalex.org/W2997134027","https://openalex.org/W3041197261","https://openalex.org/W3103786587","https://openalex.org/W3143219376","https://openalex.org/W3148499377","https://openalex.org/W6606415148","https://openalex.org/W6617255932","https://openalex.org/W6651904364"],"related_works":["https://openalex.org/W4385516583","https://openalex.org/W2276115873","https://openalex.org/W2345399109","https://openalex.org/W4313474347","https://openalex.org/W2111599449","https://openalex.org/W2145924285","https://openalex.org/W4286855404","https://openalex.org/W4210410370","https://openalex.org/W2562084017","https://openalex.org/W2079040627"],"abstract_inverted_index":{"We":[0,49],"show":[1],"that":[2,22],"a":[3,23,28,64,86],"model":[4,25,52],"based":[5,26],"on":[6,27],"the":[7,14,34,42,45,68,80,84],"physical":[8],"distance":[9],"between":[10],"neurons":[11],"can":[12,40],"explain":[13,41],"C.elegans":[15],"neural":[16,47,59],"network":[17,60],"structure,":[18],"specifically,":[19],"we":[20],"demonstrate":[21],"simple":[24],"geometrical":[29],"synapse":[30],"formation":[31],"probability":[32],"and":[33,62],"inhibition":[35],"of":[36,44,70],"short":[37],"coherent":[38],"cycles":[39],"properties":[43],"C.elegans'":[46],"network.":[48],"suggest":[50],"this":[51],"as":[53,63],"an":[54],"initial":[55],"framework":[56],"to":[57,78],"discuss":[58],"generation":[61],"first":[65],"step":[66],"toward":[67],"development":[69],"models":[71],"for":[72],"more":[73],"advanced":[74],"creatures.":[75],"In":[76],"order":[77],"measure":[79],"circle":[81,89],"frequency":[82],"in":[83],"network,":[85],"novel":[87],"graph-theory":[88],"length":[90],"measurement":[91],"algorithm":[92],"is":[93],"proposed.":[94]},"counts_by_year":[{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2016-06-24T00:00:00"}
