{"id":"https://openalex.org/W2117557320","doi":"https://doi.org/10.1093/bioinformatics/btp609","title":"Seed-based I<scp>nta</scp>RNA prediction combined with GFP-reporter system identifies mRNA targets of the small RNA Yfr1","display_name":"Seed-based I<scp>nta</scp>RNA prediction combined with GFP-reporter system identifies mRNA targets of the small RNA Yfr1","publication_year":2009,"publication_date":"2009-10-22","ids":{"openalex":"https://openalex.org/W2117557320","doi":"https://doi.org/10.1093/bioinformatics/btp609","mag":"2117557320","pmid":"https://pubmed.ncbi.nlm.nih.gov/19850757"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btp609","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp609","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/1/1/48851949/bioinformatics_26_1_1.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/26/1/1/48851949/bioinformatics_26_1_1.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079662525","display_name":"Andreas S. Richter","orcid":"https://orcid.org/0000-0002-4166-0991"},"institutions":[{"id":"https://openalex.org/I161046081","display_name":"University of Freiburg","ror":"https://ror.org/0245cg223","country_code":"DE","type":"education","lineage":["https://openalex.org/I161046081"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Andreas S. Richter","raw_affiliation_strings":["1 Bioinformatics Group, University of Freiburg, Georges-K\u00f6hler-Allee 106, Freiburg D-79110, 2 Department of Pharmaceutical Biology and Biotechnology, University of Freiburg, Stefan-Meier-Str. 19 and 3 Genetics & Experimental Bioinformatics, University of Freiburg, Sch\u00e4nzlestr. 1, Freiburg D-79104, Germany"],"affiliations":[{"raw_affiliation_string":"1 Bioinformatics Group, University of Freiburg, Georges-K\u00f6hler-Allee 106, Freiburg D-79110, 2 Department of Pharmaceutical Biology and Biotechnology, University of Freiburg, Stefan-Meier-Str. 19 and 3 Genetics & Experimental Bioinformatics, University of Freiburg, Sch\u00e4nzlestr. 1, Freiburg D-79104, Germany","institution_ids":["https://openalex.org/I161046081"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090633700","display_name":"Christian Schleberger","orcid":"https://orcid.org/0000-0002-5601-1724"},"institutions":[{"id":"https://openalex.org/I161046081","display_name":"University of Freiburg","ror":"https://ror.org/0245cg223","country_code":"DE","type":"education","lineage":["https://openalex.org/I161046081"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Christian Schleberger","raw_affiliation_strings":["1 Bioinformatics Group, University of Freiburg, Georges-K\u00f6hler-Allee 106, Freiburg D-79110, 2 Department of Pharmaceutical Biology and Biotechnology, University of Freiburg, Stefan-Meier-Str. 19 and 3 Genetics & Experimental Bioinformatics, University of Freiburg, Sch\u00e4nzlestr. 1, Freiburg D-79104, Germany"],"affiliations":[{"raw_affiliation_string":"1 Bioinformatics Group, University of Freiburg, Georges-K\u00f6hler-Allee 106, Freiburg D-79110, 2 Department of Pharmaceutical Biology and Biotechnology, University of Freiburg, Stefan-Meier-Str. 19 and 3 Genetics & Experimental Bioinformatics, University of Freiburg, Sch\u00e4nzlestr. 1, Freiburg D-79104, Germany","institution_ids":["https://openalex.org/I161046081"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017672883","display_name":"Rolf Backofen","orcid":"https://orcid.org/0000-0001-8231-3323"},"institutions":[{"id":"https://openalex.org/I161046081","display_name":"University of Freiburg","ror":"https://ror.org/0245cg223","country_code":"DE","type":"education","lineage":["https://openalex.org/I161046081"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Rolf Backofen","raw_affiliation_strings":["1 Bioinformatics Group, University of Freiburg, Georges-K\u00f6hler-Allee 106, Freiburg D-79110, 2 Department of Pharmaceutical Biology and Biotechnology, University of Freiburg, Stefan-Meier-Str. 19 and 3 Genetics & Experimental Bioinformatics, University of Freiburg, Sch\u00e4nzlestr. 1, Freiburg D-79104, Germany"],"affiliations":[{"raw_affiliation_string":"1 Bioinformatics Group, University of Freiburg, Georges-K\u00f6hler-Allee 106, Freiburg D-79110, 2 Department of Pharmaceutical Biology and Biotechnology, University of Freiburg, Stefan-Meier-Str. 19 and 3 Genetics & Experimental Bioinformatics, University of Freiburg, Sch\u00e4nzlestr. 1, Freiburg D-79104, Germany","institution_ids":["https://openalex.org/I161046081"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5015798709","display_name":"Claudia Steglich","orcid":"https://orcid.org/0000-0002-4708-6273"},"institutions":[{"id":"https://openalex.org/I161046081","display_name":"University of Freiburg","ror":"https://ror.org/0245cg223","country_code":"DE","type":"education","lineage":["https://openalex.org/I161046081"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Claudia Steglich","raw_affiliation_strings":["1 Bioinformatics Group, University of Freiburg, Georges-K\u00f6hler-Allee 106, Freiburg D-79110, 2 Department of Pharmaceutical Biology and Biotechnology, University of Freiburg, Stefan-Meier-Str. 19 and 3 Genetics & Experimental Bioinformatics, University of Freiburg, Sch\u00e4nzlestr. 1, Freiburg D-79104, Germany"],"affiliations":[{"raw_affiliation_string":"1 Bioinformatics Group, University of Freiburg, Georges-K\u00f6hler-Allee 106, Freiburg D-79110, 2 Department of Pharmaceutical Biology and Biotechnology, University of Freiburg, Stefan-Meier-Str. 19 and 3 Genetics & Experimental Bioinformatics, University of Freiburg, Sch\u00e4nzlestr. 1, Freiburg D-79104, Germany","institution_ids":["https://openalex.org/I161046081"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5079662525"],"corresponding_institution_ids":["https://openalex.org/I161046081"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":2.8307,"has_fulltext":true,"cited_by_count":93,"citation_normalized_percentile":{"value":0.90955155,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"26","issue":"1","first_page":"1","last_page":"5"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10878","display_name":"CRISPR and Genetic Engineering","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6681088209152222},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.5845470428466797},{"id":"https://openalex.org/keywords/green-fluorescent-protein","display_name":"Green fluorescent protein","score":0.5659599304199219},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5645315647125244},{"id":"https://openalex.org/keywords/translation","display_name":"Translation (biology)","score":0.5567637085914612},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5370601415634155},{"id":"https://openalex.org/keywords/messenger-rna","display_name":"Messenger RNA","score":0.5099717378616333},{"id":"https://openalex.org/keywords/prochlorococcus","display_name":"Prochlorococcus","score":0.5004074573516846},{"id":"https://openalex.org/keywords/ribosome","display_name":"Ribosome","score":0.47215935587882996},{"id":"https://openalex.org/keywords/small-rna","display_name":"Small RNA","score":0.4692053198814392},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4569989740848541},{"id":"https://openalex.org/keywords/transfer-rna","display_name":"Transfer RNA","score":0.44856616854667664},{"id":"https://openalex.org/keywords/orfs","display_name":"ORFS","score":0.42818158864974976},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3584247827529907},{"id":"https://openalex.org/keywords/open-reading-frame","display_name":"Open reading frame","score":0.3016831874847412},{"id":"https://openalex.org/keywords/bacteria","display_name":"Bacteria","score":0.20347854495048523},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.1291232407093048}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6681088209152222},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.5845470428466797},{"id":"https://openalex.org/C142613039","wikidata":"https://www.wikidata.org/wiki/Q272983","display_name":"Green fluorescent protein","level":3,"score":0.5659599304199219},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5645315647125244},{"id":"https://openalex.org/C149364088","wikidata":"https://www.wikidata.org/wiki/Q185917","display_name":"Translation (biology)","level":4,"score":0.5567637085914612},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5370601415634155},{"id":"https://openalex.org/C105580179","wikidata":"https://www.wikidata.org/wiki/Q188928","display_name":"Messenger RNA","level":3,"score":0.5099717378616333},{"id":"https://openalex.org/C2779207893","wikidata":"https://www.wikidata.org/wiki/Q18645284","display_name":"Prochlorococcus","level":5,"score":0.5004074573516846},{"id":"https://openalex.org/C88478588","wikidata":"https://www.wikidata.org/wiki/Q42244","display_name":"Ribosome","level":4,"score":0.47215935587882996},{"id":"https://openalex.org/C2779341050","wikidata":"https://www.wikidata.org/wiki/Q24287527","display_name":"Small RNA","level":4,"score":0.4692053198814392},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4569989740848541},{"id":"https://openalex.org/C153957851","wikidata":"https://www.wikidata.org/wiki/Q201448","display_name":"Transfer RNA","level":4,"score":0.44856616854667664},{"id":"https://openalex.org/C2780530800","wikidata":"https://www.wikidata.org/wiki/Q7072921","display_name":"ORFS","level":5,"score":0.42818158864974976},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3584247827529907},{"id":"https://openalex.org/C47289529","wikidata":"https://www.wikidata.org/wiki/Q908550","display_name":"Open reading frame","level":4,"score":0.3016831874847412},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.20347854495048523},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.1291232407093048},{"id":"https://openalex.org/C2779669040","wikidata":"https://www.wikidata.org/wiki/Q93315","display_name":"Cyanobacteria","level":3,"score":0.0},{"id":"https://openalex.org/C2777219426","wikidata":"https://www.wikidata.org/wiki/Q150962","display_name":"Synechococcus","level":4,"score":0.0}],"mesh":[{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012329","descriptor_name":"RNA, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012329","descriptor_name":"RNA, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012329","descriptor_name":"RNA, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D018390","descriptor_name":"Gene Targeting","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D018390","descriptor_name":"Gene Targeting","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D018390","descriptor_name":"Gene Targeting","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D048929","descriptor_name":"Prochlorococcus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D048929","descriptor_name":"Prochlorococcus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D048929","descriptor_name":"Prochlorococcus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D049452","descriptor_name":"Green Fluorescent Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D049452","descriptor_name":"Green Fluorescent Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D049452","descriptor_name":"Green Fluorescent Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btp609","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp609","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/1/1/48851949/bioinformatics_26_1_1.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19850757","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19850757","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:2796815","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2796815","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btp609","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp609","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/1/1/48851949/bioinformatics_26_1_1.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4000000059604645,"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land"}],"awards":[{"id":"https://openalex.org/G6203775711","display_name":null,"funder_award_id":"SPP1258","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G8330397625","display_name":null,"funder_award_id":"Funding","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G894356745","display_name":null,"funder_award_id":"0313921","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2117557320.pdf","grobid_xml":"https://content.openalex.org/works/W2117557320.grobid-xml"},"referenced_works_count":20,"referenced_works":["https://openalex.org/W140490944","https://openalex.org/W1543796220","https://openalex.org/W1970193008","https://openalex.org/W1975572611","https://openalex.org/W2002013652","https://openalex.org/W2019337061","https://openalex.org/W2027941418","https://openalex.org/W2037084529","https://openalex.org/W2046920238","https://openalex.org/W2059680577","https://openalex.org/W2080153486","https://openalex.org/W2082202972","https://openalex.org/W2098508116","https://openalex.org/W2110291419","https://openalex.org/W2137293271","https://openalex.org/W2139271133","https://openalex.org/W2150882562","https://openalex.org/W2159588687","https://openalex.org/W2162674813","https://openalex.org/W2167368612"],"related_works":["https://openalex.org/W2100847587","https://openalex.org/W2896056932","https://openalex.org/W2039410154","https://openalex.org/W3092429364","https://openalex.org/W2051856433","https://openalex.org/W2140948740","https://openalex.org/W2012049965","https://openalex.org/W2552089663","https://openalex.org/W3114321951","https://openalex.org/W2007001033"],"abstract_inverted_index":{"Target":[0],"predictions":[1],"for":[2],"the":[3,23,29,54,77,84],"cyanobacterial":[4],"sRNA":[5],"Yfr1":[6,17,32,52,67],"were":[7],"carried":[8],"out":[9],"with":[10],"INTARNA":[11],"in":[12],"Prochlorococcus":[13],"MED4.":[14],"The":[15],"ultraconserved":[16],"sequence":[18],"motif":[19],"was":[20,47],"defined":[21],"as":[22],"putative":[24],"interaction":[25,75,87],"seed.":[26],"To":[27],"study":[28],"impact":[30],"of":[31,56,86],"on":[33,42],"its":[34,70],"predicted":[35,58],"mRNA":[36],"targets,":[37],"a":[38],"reporter":[39],"system":[40],"based":[41],"green":[43],"fluorescent":[44],"protein":[45],"(GFP)":[46],"applied.":[48],"We":[49,60],"show":[50],"that":[51,66],"inhibits":[53],"translation":[55],"two":[57],"targets.":[59],"used":[61],"mutation":[62],"analysis":[63],"to":[64,82],"confirm":[65],"directly":[68],"regulates":[69],"targets":[71],"by":[72],"an":[73],"antisense":[74],"sequestering":[76],"ribosome":[78],"binding":[79],"site,":[80],"and":[81],"assess":[83],"importance":[85],"site":[88],"accessibility.":[89]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":9},{"year":2019,"cited_by_count":11},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":10},{"year":2016,"cited_by_count":6},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":9},{"year":2013,"cited_by_count":6},{"year":2012,"cited_by_count":9}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2016-06-24T00:00:00"}
