{"id":"https://openalex.org/W2169914921","doi":"https://doi.org/10.1093/bioinformatics/btp608","title":"The gputools package enables GPU computing in R","display_name":"The gputools package enables GPU computing in R","publication_year":2009,"publication_date":"2009-10-22","ids":{"openalex":"https://openalex.org/W2169914921","doi":"https://doi.org/10.1093/bioinformatics/btp608","mag":"2169914921","pmid":"https://pubmed.ncbi.nlm.nih.gov/19850754"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btp608","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp608","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/1/134/48851508/bioinformatics_26_1_134.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/26/1/134/48851508/bioinformatics_26_1_134.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5110514633","display_name":"Joshua Buckner","orcid":null},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Joshua Buckner","raw_affiliation_strings":["1 Department of Psychiatry and Molecular and Behavioral Neuroscience Institute, 2 National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109 and 3 Rapid Biologics, P.O. Box 31989, Seattle, WA 98103, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Psychiatry and Molecular and Behavioral Neuroscience Institute, 2 National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109 and 3 Rapid Biologics, P.O. Box 31989, Seattle, WA 98103, USA","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011654299","display_name":"Justin Wilson","orcid":"https://orcid.org/0000-0002-4300-5480"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Justin Wilson","raw_affiliation_strings":["1 Department of Psychiatry and Molecular and Behavioral Neuroscience Institute, 2 National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109 and 3 Rapid Biologics, P.O. Box 31989, Seattle, WA 98103, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Psychiatry and Molecular and Behavioral Neuroscience Institute, 2 National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109 and 3 Rapid Biologics, P.O. Box 31989, Seattle, WA 98103, USA","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110931147","display_name":"Mark Seligman","orcid":null},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mark Seligman","raw_affiliation_strings":["1 Department of Psychiatry and Molecular and Behavioral Neuroscience Institute, 2 National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109 and 3 Rapid Biologics, P.O. Box 31989, Seattle, WA 98103, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Psychiatry and Molecular and Behavioral Neuroscience Institute, 2 National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109 and 3 Rapid Biologics, P.O. Box 31989, Seattle, WA 98103, USA","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Brian Athey","orcid":null},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brian Athey","raw_affiliation_strings":["1 Department of Psychiatry and Molecular and Behavioral Neuroscience Institute, 2 National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109 and 3 Rapid Biologics, P.O. Box 31989, Seattle, WA 98103, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Psychiatry and Molecular and Behavioral Neuroscience Institute, 2 National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109 and 3 Rapid Biologics, P.O. Box 31989, Seattle, WA 98103, USA","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049286080","display_name":"Stanley J. Watson","orcid":"https://orcid.org/0000-0003-4980-5523"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Stanley Watson","raw_affiliation_strings":["1 Department of Psychiatry and Molecular and Behavioral Neuroscience Institute, 2 National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109 and 3 Rapid Biologics, P.O. Box 31989, Seattle, WA 98103, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Psychiatry and Molecular and Behavioral Neuroscience Institute, 2 National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109 and 3 Rapid Biologics, P.O. Box 31989, Seattle, WA 98103, USA","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5108018249","display_name":"Fan Meng","orcid":"https://orcid.org/0000-0001-8002-0615"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Fan Meng","raw_affiliation_strings":["1 Department of Psychiatry and Molecular and Behavioral Neuroscience Institute, 2 National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109 and 3 Rapid Biologics, P.O. Box 31989, Seattle, WA 98103, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Psychiatry and Molecular and Behavioral Neuroscience Institute, 2 National Center for Integrative Biomedical Informatics, University of Michigan, Ann Arbor, MI 48109 and 3 Rapid Biologics, P.O. Box 31989, Seattle, WA 98103, USA","institution_ids":["https://openalex.org/I27837315"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5110514633"],"corresponding_institution_ids":["https://openalex.org/I27837315"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":2.2857,"has_fulltext":false,"cited_by_count":41,"citation_normalized_percentile":{"value":0.88357429,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"26","issue":"1","first_page":"134","last_page":"135"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9922000169754028,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.9900000095367432,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8611488342285156},{"id":"https://openalex.org/keywords/cuda","display_name":"CUDA","score":0.8080536127090454},{"id":"https://openalex.org/keywords/graphics","display_name":"Graphics","score":0.7434936761856079},{"id":"https://openalex.org/keywords/r-package","display_name":"R package","score":0.6639785766601562},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.509615421295166},{"id":"https://openalex.org/keywords/general-purpose-computing-on-graphics-processing-units","display_name":"General-purpose computing on graphics processing units","score":0.4497048556804657},{"id":"https://openalex.org/keywords/supercomputer","display_name":"Supercomputer","score":0.43020883202552795},{"id":"https://openalex.org/keywords/computational-science","display_name":"Computational science","score":0.39762064814567566},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.307096004486084}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8611488342285156},{"id":"https://openalex.org/C2778119891","wikidata":"https://www.wikidata.org/wiki/Q477690","display_name":"CUDA","level":2,"score":0.8080536127090454},{"id":"https://openalex.org/C21442007","wikidata":"https://www.wikidata.org/wiki/Q1027879","display_name":"Graphics","level":2,"score":0.7434936761856079},{"id":"https://openalex.org/C2984074130","wikidata":"https://www.wikidata.org/wiki/Q73539779","display_name":"R package","level":2,"score":0.6639785766601562},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.509615421295166},{"id":"https://openalex.org/C50630238","wikidata":"https://www.wikidata.org/wiki/Q971505","display_name":"General-purpose computing on graphics processing units","level":3,"score":0.4497048556804657},{"id":"https://openalex.org/C83283714","wikidata":"https://www.wikidata.org/wiki/Q121117","display_name":"Supercomputer","level":2,"score":0.43020883202552795},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.39762064814567566},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.307096004486084}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btp608","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp608","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/1/134/48851508/bioinformatics_26_1_134.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19850754","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19850754","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:2032220","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2796814","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btp608","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp608","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/26/1/134/48851508/bioinformatics_26_1_134.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9","score":0.44999998807907104}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2169914921.pdf","grobid_xml":"https://content.openalex.org/works/W2169914921.grobid-xml"},"referenced_works_count":8,"referenced_works":["https://openalex.org/W1635484243","https://openalex.org/W1912982817","https://openalex.org/W1964769652","https://openalex.org/W2010315317","https://openalex.org/W2135460096","https://openalex.org/W2738579668","https://openalex.org/W4285719527","https://openalex.org/W4302564868"],"related_works":["https://openalex.org/W1963859303","https://openalex.org/W2364044215","https://openalex.org/W2389600408","https://openalex.org/W240129890","https://openalex.org/W3048701459","https://openalex.org/W2149078538","https://openalex.org/W2080146221","https://openalex.org/W2370314112","https://openalex.org/W1912958759","https://openalex.org/W2792081825"],"abstract_inverted_index":{"The":[0],"package":[1,20],"is":[2,21],"available":[3,22],"from":[4],"CRAN,":[5],"the":[6],"R":[7,19],"project's":[8],"repository":[9],"of":[10],"packages,":[11],"at":[12,23],"http://cran.r-project.org/web/packages/gputools":[13],"More":[14],"information":[15],"about":[16],"our":[17],"gputools":[18],"http://brainarray.mbni.med.umich.edu/brainarray/Rgpgpu":[24]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":7},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":7}],"updated_date":"2026-03-25T23:56:10.502304","created_date":"2025-10-10T00:00:00"}
