{"id":"https://openalex.org/W2161427213","doi":"https://doi.org/10.1093/bioinformatics/btp493","title":"Mobyle: a new full web bioinformatics framework","display_name":"Mobyle: a new full web bioinformatics framework","publication_year":2009,"publication_date":"2009-08-17","ids":{"openalex":"https://openalex.org/W2161427213","doi":"https://doi.org/10.1093/bioinformatics/btp493","mag":"2161427213","pmid":"https://pubmed.ncbi.nlm.nih.gov/19689959"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btp493","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp493","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2773253","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5019758757","display_name":"Bertrand N\u00e9ron","orcid":"https://orcid.org/0000-0002-0220-0482"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Bertrand N\u00e9ron","raw_affiliation_strings":["1 Groupe Logiciels et Banques de Donn\u00e9es, Institut Pasteur, 28, rue du Dr Roux, 75724 Paris Cedex, 2UMR-S 936, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, 3Laboratoire Interactions Plantes Micro-organismes (LIPM) UMR441/2594, INRA/CNRS F-31320 Castanet Tolosan and 4UMR-S 973, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Groupe Logiciels et Banques de Donn\u00e9es, Institut Pasteur, 28, rue du Dr Roux, 75724 Paris Cedex, 2UMR-S 936, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, 3Laboratoire Interactions Plantes Micro-organismes (LIPM) UMR441/2594, INRA/CNRS F-31320 Castanet Tolosan and 4UMR-S 973, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, France","institution_ids":["https://openalex.org/I157536573","https://openalex.org/I204730241","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057666741","display_name":"Herv\u00e9 M\u00e9nager","orcid":"https://orcid.org/0000-0002-7552-1009"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Herv\u00e9 M\u00e9nager","raw_affiliation_strings":["1 Groupe Logiciels et Banques de Donn\u00e9es, Institut Pasteur, 28, rue du Dr Roux, 75724 Paris Cedex, 2UMR-S 936, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, 3Laboratoire Interactions Plantes Micro-organismes (LIPM) UMR441/2594, INRA/CNRS F-31320 Castanet Tolosan and 4UMR-S 973, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Groupe Logiciels et Banques de Donn\u00e9es, Institut Pasteur, 28, rue du Dr Roux, 75724 Paris Cedex, 2UMR-S 936, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, 3Laboratoire Interactions Plantes Micro-organismes (LIPM) UMR441/2594, INRA/CNRS F-31320 Castanet Tolosan and 4UMR-S 973, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, France","institution_ids":["https://openalex.org/I157536573","https://openalex.org/I204730241","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006954173","display_name":"Corinne Maufrais","orcid":"https://orcid.org/0000-0002-8718-0432"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Corinne Maufrais","raw_affiliation_strings":["1 Groupe Logiciels et Banques de Donn\u00e9es, Institut Pasteur, 28, rue du Dr Roux, 75724 Paris Cedex, 2UMR-S 936, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, 3Laboratoire Interactions Plantes Micro-organismes (LIPM) UMR441/2594, INRA/CNRS F-31320 Castanet Tolosan and 4UMR-S 973, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Groupe Logiciels et Banques de Donn\u00e9es, Institut Pasteur, 28, rue du Dr Roux, 75724 Paris Cedex, 2UMR-S 936, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, 3Laboratoire Interactions Plantes Micro-organismes (LIPM) UMR441/2594, INRA/CNRS F-31320 Castanet Tolosan and 4UMR-S 973, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, France","institution_ids":["https://openalex.org/I157536573","https://openalex.org/I204730241","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075851860","display_name":"Nicolas Joly","orcid":"https://orcid.org/0000-0003-2731-3827"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Nicolas Joly","raw_affiliation_strings":["1 Groupe Logiciels et Banques de Donn\u00e9es, Institut Pasteur, 28, rue du Dr Roux, 75724 Paris Cedex, 2UMR-S 936, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, 3Laboratoire Interactions Plantes Micro-organismes (LIPM) UMR441/2594, INRA/CNRS F-31320 Castanet Tolosan and 4UMR-S 973, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Groupe Logiciels et Banques de Donn\u00e9es, Institut Pasteur, 28, rue du Dr Roux, 75724 Paris Cedex, 2UMR-S 936, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, 3Laboratoire Interactions Plantes Micro-organismes (LIPM) UMR441/2594, INRA/CNRS F-31320 Castanet Tolosan and 4UMR-S 973, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, France","institution_ids":["https://openalex.org/I157536573","https://openalex.org/I204730241","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039355513","display_name":"Julien Maupetit","orcid":"https://orcid.org/0000-0001-6285-6646"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Julien Maupetit","raw_affiliation_strings":["1 Groupe Logiciels et Banques de Donn\u00e9es, Institut Pasteur, 28, rue du Dr Roux, 75724 Paris Cedex, 2UMR-S 936, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, 3Laboratoire Interactions Plantes Micro-organismes (LIPM) UMR441/2594, INRA/CNRS F-31320 Castanet Tolosan and 4UMR-S 973, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Groupe Logiciels et Banques de Donn\u00e9es, Institut Pasteur, 28, rue du Dr Roux, 75724 Paris Cedex, 2UMR-S 936, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, 3Laboratoire Interactions Plantes Micro-organismes (LIPM) UMR441/2594, INRA/CNRS F-31320 Castanet Tolosan and 4UMR-S 973, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, France","institution_ids":["https://openalex.org/I157536573","https://openalex.org/I204730241","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016008218","display_name":"S\u00e9bastien Letort","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"S\u00e9bastien Letort","raw_affiliation_strings":["1 Groupe Logiciels et Banques de Donn\u00e9es, Institut Pasteur, 28, rue du Dr Roux, 75724 Paris Cedex, 2UMR-S 936, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, 3Laboratoire Interactions Plantes Micro-organismes (LIPM) UMR441/2594, INRA/CNRS F-31320 Castanet Tolosan and 4UMR-S 973, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Groupe Logiciels et Banques de Donn\u00e9es, Institut Pasteur, 28, rue du Dr Roux, 75724 Paris Cedex, 2UMR-S 936, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, 3Laboratoire Interactions Plantes Micro-organismes (LIPM) UMR441/2594, INRA/CNRS F-31320 Castanet Tolosan and 4UMR-S 973, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, France","institution_ids":["https://openalex.org/I157536573","https://openalex.org/I204730241","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086224635","display_name":"S\u00e9bastien Carr\u00e8re","orcid":"https://orcid.org/0000-0002-2348-0778"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"S\u00e9bastien Carrere","raw_affiliation_strings":["1 Groupe Logiciels et Banques de Donn\u00e9es, Institut Pasteur, 28, rue du Dr Roux, 75724 Paris Cedex, 2UMR-S 936, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, 3Laboratoire Interactions Plantes Micro-organismes (LIPM) UMR441/2594, INRA/CNRS F-31320 Castanet Tolosan and 4UMR-S 973, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Groupe Logiciels et Banques de Donn\u00e9es, Institut Pasteur, 28, rue du Dr Roux, 75724 Paris Cedex, 2UMR-S 936, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, 3Laboratoire Interactions Plantes Micro-organismes (LIPM) UMR441/2594, INRA/CNRS F-31320 Castanet Tolosan and 4UMR-S 973, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, France","institution_ids":["https://openalex.org/I157536573","https://openalex.org/I204730241","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002795410","display_name":"Pierre Tuff\u00e9ry","orcid":"https://orcid.org/0000-0003-1033-9895"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Pierre Tuffery","raw_affiliation_strings":["1 Groupe Logiciels et Banques de Donn\u00e9es, Institut Pasteur, 28, rue du Dr Roux, 75724 Paris Cedex, 2UMR-S 936, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, 3Laboratoire Interactions Plantes Micro-organismes (LIPM) UMR441/2594, INRA/CNRS F-31320 Castanet Tolosan and 4UMR-S 973, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Groupe Logiciels et Banques de Donn\u00e9es, Institut Pasteur, 28, rue du Dr Roux, 75724 Paris Cedex, 2UMR-S 936, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, 3Laboratoire Interactions Plantes Micro-organismes (LIPM) UMR441/2594, INRA/CNRS F-31320 Castanet Tolosan and 4UMR-S 973, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, France","institution_ids":["https://openalex.org/I157536573","https://openalex.org/I204730241","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5082709917","display_name":"Catherine Letondal","orcid":"https://orcid.org/0000-0003-4935-5008"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I157536573"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Catherine Letondal","raw_affiliation_strings":["1 Groupe Logiciels et Banques de Donn\u00e9es, Institut Pasteur, 28, rue du Dr Roux, 75724 Paris Cedex, 2UMR-S 936, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, 3Laboratoire Interactions Plantes Micro-organismes (LIPM) UMR441/2594, INRA/CNRS F-31320 Castanet Tolosan and 4UMR-S 973, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Groupe Logiciels et Banques de Donn\u00e9es, Institut Pasteur, 28, rue du Dr Roux, 75724 Paris Cedex, 2UMR-S 936, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, 3Laboratoire Interactions Plantes Micro-organismes (LIPM) UMR441/2594, INRA/CNRS F-31320 Castanet Tolosan and 4UMR-S 973, RPBS, Universit\u00e9 Paris Diderot-Paris7, 75205 Paris Cedex 13, France","institution_ids":["https://openalex.org/I157536573","https://openalex.org/I204730241","https://openalex.org/I1294671590"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":64.6824,"has_fulltext":true,"cited_by_count":316,"citation_normalized_percentile":{"value":0.99912716,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":100},"biblio":{"volume":"25","issue":"22","first_page":"3005","last_page":"3011"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.557200014591217,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.557200014591217,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.13600000739097595,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.11089999973773956,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8188332319259644},{"id":"https://openalex.org/keywords/web-service","display_name":"Web service","score":0.6494340300559998},{"id":"https://openalex.org/keywords/usable","display_name":"USable","score":0.6380654573440552},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.5720012187957764},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5474135279655457},{"id":"https://openalex.org/keywords/user-interface","display_name":"User interface","score":0.5358712673187256},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.48674607276916504},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.44284945726394653},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.4318670630455017},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.29864636063575745},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.1339091956615448}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8188332319259644},{"id":"https://openalex.org/C35578498","wikidata":"https://www.wikidata.org/wiki/Q193424","display_name":"Web service","level":2,"score":0.6494340300559998},{"id":"https://openalex.org/C2780615836","wikidata":"https://www.wikidata.org/wiki/Q2471869","display_name":"USable","level":2,"score":0.6380654573440552},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.5720012187957764},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5474135279655457},{"id":"https://openalex.org/C89505385","wikidata":"https://www.wikidata.org/wiki/Q47146","display_name":"User interface","level":2,"score":0.5358712673187256},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.48674607276916504},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.44284945726394653},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.4318670630455017},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.29864636063575745},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.1339091956615448},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/btp493","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp493","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19689959","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19689959","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:HAL:hal-01287963v1","is_oa":false,"landing_page_url":"https://hal.science/hal-01287963","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2009, 25 (22), pp.3005-3011. ⟨10.1093/bioinformatics/btp493⟩","raw_type":"Journal articles"},{"id":"pmh:oai:HAL:pasteur-04843932v1","is_oa":false,"landing_page_url":"https://pasteur.hal.science/pasteur-04843932","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2009, 25 (22), pp.3005-3011. ⟨10.1093/bioinformatics/btp493⟩","raw_type":"Journal articles"},{"id":"pmh:oai:pubmedcentral.nih.gov:2773253","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2773253","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:2773253","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2773253","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":40,"referenced_works":["https://openalex.org/W77717277","https://openalex.org/W607944013","https://openalex.org/W1700785270","https://openalex.org/W1968201280","https://openalex.org/W1977859620","https://openalex.org/W1980240737","https://openalex.org/W1996423252","https://openalex.org/W2010581638","https://openalex.org/W2020360970","https://openalex.org/W2021559748","https://openalex.org/W2032264453","https://openalex.org/W2066131085","https://openalex.org/W2071286514","https://openalex.org/W2088307662","https://openalex.org/W2099305423","https://openalex.org/W2113182242","https://openalex.org/W2117724905","https://openalex.org/W2123663722","https://openalex.org/W2130374513","https://openalex.org/W2142110984","https://openalex.org/W2145550746","https://openalex.org/W2161645441","https://openalex.org/W2161679242","https://openalex.org/W2165482734","https://openalex.org/W2168103533","https://openalex.org/W2170488822","https://openalex.org/W2242630490","https://openalex.org/W2282891966","https://openalex.org/W2342091124","https://openalex.org/W2500135585","https://openalex.org/W4239720002","https://openalex.org/W4285719527","https://openalex.org/W6603156799","https://openalex.org/W6608372704","https://openalex.org/W6618879168","https://openalex.org/W6678222360","https://openalex.org/W6681203343","https://openalex.org/W6690528449","https://openalex.org/W6843478484","https://openalex.org/W6845968768"],"related_works":["https://openalex.org/W2982321410","https://openalex.org/W95465806","https://openalex.org/W2392004567","https://openalex.org/W2046296964","https://openalex.org/W2940029036","https://openalex.org/W4388292429","https://openalex.org/W2756595502","https://openalex.org/W2010789764","https://openalex.org/W2187233292","https://openalex.org/W2219281195"],"abstract_inverted_index":{"MOTIVATION:":[0],"For":[1],"the":[2,85,95,102,166,200,216,219,224,227,241,258,261,265,287,290],"biologist,":[3],"running":[4,153],"bioinformatics":[5,154,197],"analyses":[6,170],"involves":[7],"a":[8,40,70,76,80,88,113,125,139,144,176,192,236],"time-consuming":[9],"management":[10,162],"of":[11,82,115,127,183,195,243,260,289],"data":[12,42,110,161],"and":[13,24,97,146,152,171,279,293],"tools.":[14],"Users":[15],"need":[16,30],"support":[17],"to":[18,31,34,54,62,65,107,123,142,168,172,203,208,229],"organize":[19],"their":[20,26,36],"work,":[21],"retrieve":[22],"parameters":[23],"reproduce":[25,169],"analyses.":[27,155],"They":[28],"also":[29,222],"be":[32,52,63,133],"able":[33,64],"combine":[35,173],"analytic":[37],"tools":[38,50,68,83,174],"using":[39,175,247],"safe":[41],"flow":[43],"software":[44],"mechanism.":[45],"Finally,":[46],"given":[47],"that":[48,87,164,239],"scientific":[49],"can":[51],"difficult":[53],"install,":[55],"it":[56,100],"is":[57,101,235,255,271,284,294],"particularly":[58],"helpful":[59],"for":[60,79,150,226],"biologists":[61],"use":[66],"these":[67],"through":[69],"web":[71,77,90,245,267],"user":[72,167,201],"interface.":[73],"However,":[74],"providing":[75],"interface":[78],"set":[81],"raises":[84],"problem":[86],"single":[89],"portal":[91,121],"cannot":[92],"offer":[93],"all":[94],"existing":[96],"possible":[98],"services:":[99],"user,":[103,218],"again,":[104],"who":[105],"has":[106],"cope":[108],"with":[109],"copy":[111],"among":[112],"number":[114],"different":[116],"services.":[117],"A":[118],"framework":[119],"enabling":[120,191],"administrators":[122],"build":[124],"network":[126,194],"cooperating":[128],"services":[129,184,232],"would":[130],"therefore":[131],"clearly":[132],"beneficial.":[134],"RESULTS:":[135],"We":[136],"have":[137],"designed":[138],"system,":[140],"Mobyle,":[141],"provide":[143],"flexible":[145],"usable":[147],"Web":[148],"environment":[149],"defining":[151],"It":[156,270],"embeds":[157],"simple":[158],"yet":[159],"powerful":[160],"features":[163],"allow":[165],"hierarchical":[177],"typing":[178],"system.":[179],"Mobyle":[180,188,220,248,253],"offers":[181],"invocation":[182],"distributed":[185,256,285],"over":[186],"remote":[187,231],"servers,":[189],"thus":[190],"federated":[193],"curated":[196],"portals":[198],"without":[199],"having":[202],"learn":[204],"complex":[205],"concepts":[206],"or":[207],"install":[209],"sophisticated":[210],"software.":[211],"While":[212],"being":[213],"focused":[214],"on":[215,264,274],"end":[217],"system":[221,254],"addresses":[223],"need,":[225],"bioinfomatician,":[228],"automate":[230],"execution:":[233],"PlayMOBY":[234,282],"companion":[237,283],"tool":[238],"automates":[240],"publication":[242],"BioMOBY":[244],"services,":[246],"program":[249],"definitions.":[250],"AVAILABILITY:":[251],"The":[252,281],"under":[257,286],"terms":[259,288],"GNU":[262],"GPLv2":[263],"project":[266],"site":[268],"(http://bioweb2.pasteur.fr/projects/mobyle/).":[269],"already":[272],"deployed":[273],"three":[275],"servers:":[276],"http://mobyle.pasteur.fr,":[277],"http://mobyle.rpbs.univ-paris-diderot.fr":[278],"http://lipm-bioinfo.toulouse.inra.fr/Mobyle.":[280],"CeCILL":[291],"license,":[292],"available":[295],"at":[296],"http://lipm-bioinfo.toulouse.inra.fr/biomoby/PlayMOBY/.":[297]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":14},{"year":2022,"cited_by_count":10},{"year":2021,"cited_by_count":9},{"year":2020,"cited_by_count":9},{"year":2019,"cited_by_count":15},{"year":2018,"cited_by_count":19},{"year":2017,"cited_by_count":25},{"year":2016,"cited_by_count":31},{"year":2015,"cited_by_count":25},{"year":2014,"cited_by_count":34},{"year":2013,"cited_by_count":28},{"year":2012,"cited_by_count":31}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}