{"id":"https://openalex.org/W2109391327","doi":"https://doi.org/10.1093/bioinformatics/btp341","title":"Visual and statistical comparison of metagenomes","display_name":"Visual and statistical comparison of metagenomes","publication_year":2009,"publication_date":"2009-06-10","ids":{"openalex":"https://openalex.org/W2109391327","doi":"https://doi.org/10.1093/bioinformatics/btp341","mag":"2109391327","pmid":"https://pubmed.ncbi.nlm.nih.gov/19515961"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btp341","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp341","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/15/1849/48993021/bioinformatics_25_15_1849.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/25/15/1849/48993021/bioinformatics_25_15_1849.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5026270215","display_name":"Suparna Mitra","orcid":"https://orcid.org/0000-0002-9378-1496"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Suparna Mitra","raw_affiliation_strings":["1 Center for Bioinformatics ZBIT, T\u00fcbingen University, Sand 14, 72076 T\u00fcbingen and 2 Institute for Stochastics, Karlsruhe University, Kaiserstra\u00dfe 89, 76133 Karlsruhe, Germany"],"affiliations":[{"raw_affiliation_string":"1 Center for Bioinformatics ZBIT, T\u00fcbingen University, Sand 14, 72076 T\u00fcbingen and 2 Institute for Stochastics, Karlsruhe University, Kaiserstra\u00dfe 89, 76133 Karlsruhe, Germany","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006230967","display_name":"Bernhard Klar","orcid":"https://orcid.org/0000-0002-1419-5473"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bernhard Klar","raw_affiliation_strings":["1 Center for Bioinformatics ZBIT, T\u00fcbingen University, Sand 14, 72076 T\u00fcbingen and 2 Institute for Stochastics, Karlsruhe University, Kaiserstra\u00dfe 89, 76133 Karlsruhe, Germany"],"affiliations":[{"raw_affiliation_string":"1 Center for Bioinformatics ZBIT, T\u00fcbingen University, Sand 14, 72076 T\u00fcbingen and 2 Institute for Stochastics, Karlsruhe University, Kaiserstra\u00dfe 89, 76133 Karlsruhe, Germany","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5026094905","display_name":"Daniel H. Huson","orcid":"https://orcid.org/0000-0002-2961-604X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Daniel H. Huson","raw_affiliation_strings":["1 Center for Bioinformatics ZBIT, T\u00fcbingen University, Sand 14, 72076 T\u00fcbingen and 2 Institute for Stochastics, Karlsruhe University, Kaiserstra\u00dfe 89, 76133 Karlsruhe, Germany"],"affiliations":[{"raw_affiliation_string":"1 Center for Bioinformatics ZBIT, T\u00fcbingen University, Sand 14, 72076 T\u00fcbingen and 2 Institute for Stochastics, Karlsruhe University, Kaiserstra\u00dfe 89, 76133 Karlsruhe, Germany","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5026270215"],"corresponding_institution_ids":[],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":4.7174,"has_fulltext":false,"cited_by_count":80,"citation_normalized_percentile":{"value":0.957791,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"25","issue":"15","first_page":"1849","last_page":"1855"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.9147887229919434},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7573962211608887},{"id":"https://openalex.org/keywords/pairwise-comparison","display_name":"Pairwise comparison","score":0.6431384086608887},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5904430150985718},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5846218466758728},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5550737380981445},{"id":"https://openalex.org/keywords/sample","display_name":"Sample (material)","score":0.4573823809623718},{"id":"https://openalex.org/keywords/implementation","display_name":"Implementation","score":0.4356456995010376},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4278255105018616},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.39459002017974854},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.16478943824768066},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1401486098766327},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.12676796317100525},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.09421491622924805}],"concepts":[{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.9147887229919434},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7573962211608887},{"id":"https://openalex.org/C184898388","wikidata":"https://www.wikidata.org/wiki/Q1435712","display_name":"Pairwise comparison","level":2,"score":0.6431384086608887},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5904430150985718},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5846218466758728},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5550737380981445},{"id":"https://openalex.org/C198531522","wikidata":"https://www.wikidata.org/wiki/Q485146","display_name":"Sample (material)","level":2,"score":0.4573823809623718},{"id":"https://openalex.org/C26713055","wikidata":"https://www.wikidata.org/wiki/Q245962","display_name":"Implementation","level":2,"score":0.4356456995010376},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4278255105018616},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.39459002017974854},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.16478943824768066},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1401486098766327},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.12676796317100525},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.09421491622924805},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004783","descriptor_name":"Environmental Microbiology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004783","descriptor_name":"Environmental Microbiology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004783","descriptor_name":"Environmental Microbiology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btp341","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp341","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/15/1849/48993021/bioinformatics_25_15_1849.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19515961","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19515961","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.928.2546","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.928.2546","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.oxfordjournals.org/content/early/2009/06/10/bioinformatics.btp341.full.pdf","raw_type":"text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btp341","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp341","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/15/1849/48993021/bioinformatics_25_15_1849.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Responsible consumption and production","id":"https://metadata.un.org/sdg/12","score":0.41999998688697815}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2109391327.pdf","grobid_xml":"https://content.openalex.org/works/W2109391327.grobid-xml"},"referenced_works_count":30,"referenced_works":["https://openalex.org/W1562379206","https://openalex.org/W1791999417","https://openalex.org/W1989348205","https://openalex.org/W1990453950","https://openalex.org/W1995393174","https://openalex.org/W2042893247","https://openalex.org/W2055043387","https://openalex.org/W2075623226","https://openalex.org/W2075716829","https://openalex.org/W2093830129","https://openalex.org/W2112627990","https://openalex.org/W2114034054","https://openalex.org/W2116895571","https://openalex.org/W2121044470","https://openalex.org/W2122719918","https://openalex.org/W2123388186","https://openalex.org/W2126809954","https://openalex.org/W2133203904","https://openalex.org/W2135445066","https://openalex.org/W2140604849","https://openalex.org/W2145416275","https://openalex.org/W2145531801","https://openalex.org/W2148474327","https://openalex.org/W2148994713","https://openalex.org/W2150337627","https://openalex.org/W2156296225","https://openalex.org/W2165065263","https://openalex.org/W2167062509","https://openalex.org/W2169267759","https://openalex.org/W6678230397"],"related_works":["https://openalex.org/W638577851","https://openalex.org/W2968354375","https://openalex.org/W2359440920","https://openalex.org/W4242417330","https://openalex.org/W2889550857","https://openalex.org/W3013372948","https://openalex.org/W3135997498","https://openalex.org/W3198631238","https://openalex.org/W2968048207","https://openalex.org/W3044162010"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":11},{"year":2013,"cited_by_count":12},{"year":2012,"cited_by_count":10}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}