{"id":"https://openalex.org/W2112712631","doi":"https://doi.org/10.1093/bioinformatics/btp304","title":"FlexServ: an integrated tool for the analysis of protein flexibility","display_name":"FlexServ: an integrated tool for the analysis of protein flexibility","publication_year":2009,"publication_date":"2009-05-07","ids":{"openalex":"https://openalex.org/W2112712631","doi":"https://doi.org/10.1093/bioinformatics/btp304","mag":"2112712631","pmid":"https://pubmed.ncbi.nlm.nih.gov/19429600"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btp304","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp304","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/13/1709/48996704/bioinformatics_25_13_1709.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/25/13/1709/48996704/bioinformatics_25_13_1709.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101651509","display_name":"Jordi Camps","orcid":"https://orcid.org/0000-0001-8763-9947"},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jordi Camps","raw_affiliation_strings":["1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Barcelona Science Park, Josep Samitier 1-5, Barcelona 08028 and Barcelona Supercomputing Centre, 2National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 31, Barcelona 08034, Spain, 3National Institute of Bioinformatics, Structural Bioinformatics, Josep Samitier 1-5 and 4Department of Biochemistry and Molecular Biology, University of Barcelona, Av Diagonal 645, Barcelona 08028, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Barcelona Science Park, Josep Samitier 1-5, Barcelona 08028 and Barcelona Supercomputing Centre, 2National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 31, Barcelona 08034, Spain, 3National Institute of Bioinformatics, Structural Bioinformatics, Josep Samitier 1-5 and 4Department of Biochemistry and Molecular Biology, University of Barcelona, Av Diagonal 645, Barcelona 08028, Spain","institution_ids":["https://openalex.org/I2799803557","https://openalex.org/I71999127","https://openalex.org/I9617848"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014763956","display_name":"Oliver Carrillo","orcid":"https://orcid.org/0000-0002-1862-5346"},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Oliver Carrillo","raw_affiliation_strings":["1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Barcelona Science Park, Josep Samitier 1-5, Barcelona 08028 and Barcelona Supercomputing Centre, 2National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 31, Barcelona 08034, Spain, 3National Institute of Bioinformatics, Structural Bioinformatics, Josep Samitier 1-5 and 4Department of Biochemistry and Molecular Biology, University of Barcelona, Av Diagonal 645, Barcelona 08028, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Barcelona Science Park, Josep Samitier 1-5, Barcelona 08028 and Barcelona Supercomputing Centre, 2National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 31, Barcelona 08034, Spain, 3National Institute of Bioinformatics, Structural Bioinformatics, Josep Samitier 1-5 and 4Department of Biochemistry and Molecular Biology, University of Barcelona, Av Diagonal 645, Barcelona 08028, Spain","institution_ids":["https://openalex.org/I2799803557","https://openalex.org/I71999127","https://openalex.org/I9617848"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058831119","display_name":"Agust\u00ed Emperador","orcid":"https://orcid.org/0000-0002-8441-1821"},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Agust\u00ed Emperador","raw_affiliation_strings":["1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Barcelona Science Park, Josep Samitier 1-5, Barcelona 08028 and Barcelona Supercomputing Centre, 2National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 31, Barcelona 08034, Spain, 3National Institute of Bioinformatics, Structural Bioinformatics, Josep Samitier 1-5 and 4Department of Biochemistry and Molecular Biology, University of Barcelona, Av Diagonal 645, Barcelona 08028, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Barcelona Science Park, Josep Samitier 1-5, Barcelona 08028 and Barcelona Supercomputing Centre, 2National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 31, Barcelona 08034, Spain, 3National Institute of Bioinformatics, Structural Bioinformatics, Josep Samitier 1-5 and 4Department of Biochemistry and Molecular Biology, University of Barcelona, Av Diagonal 645, Barcelona 08028, Spain","institution_ids":["https://openalex.org/I2799803557","https://openalex.org/I71999127","https://openalex.org/I9617848"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057166992","display_name":"Laura Orellana","orcid":"https://orcid.org/0000-0003-1927-555X"},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Laura Orellana","raw_affiliation_strings":["1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Barcelona Science Park, Josep Samitier 1-5, Barcelona 08028 and Barcelona Supercomputing Centre, 2National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 31, Barcelona 08034, Spain, 3National Institute of Bioinformatics, Structural Bioinformatics, Josep Samitier 1-5 and 4Department of Biochemistry and Molecular Biology, University of Barcelona, Av Diagonal 645, Barcelona 08028, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Barcelona Science Park, Josep Samitier 1-5, Barcelona 08028 and Barcelona Supercomputing Centre, 2National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 31, Barcelona 08034, Spain, 3National Institute of Bioinformatics, Structural Bioinformatics, Josep Samitier 1-5 and 4Department of Biochemistry and Molecular Biology, University of Barcelona, Av Diagonal 645, Barcelona 08028, Spain","institution_ids":["https://openalex.org/I2799803557","https://openalex.org/I71999127","https://openalex.org/I9617848"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023487324","display_name":"Manuel Rueda","orcid":"https://orcid.org/0000-0001-9280-058X"},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Manuel Rueda","raw_affiliation_strings":["1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Barcelona Science Park, Josep Samitier 1-5, Barcelona 08028 and Barcelona Supercomputing Centre, 2National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 31, Barcelona 08034, Spain, 3National Institute of Bioinformatics, Structural Bioinformatics, Josep Samitier 1-5 and 4Department of Biochemistry and Molecular Biology, University of Barcelona, Av Diagonal 645, Barcelona 08028, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Barcelona Science Park, Josep Samitier 1-5, Barcelona 08028 and Barcelona Supercomputing Centre, 2National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 31, Barcelona 08034, Spain, 3National Institute of Bioinformatics, Structural Bioinformatics, Josep Samitier 1-5 and 4Department of Biochemistry and Molecular Biology, University of Barcelona, Av Diagonal 645, Barcelona 08028, Spain","institution_ids":["https://openalex.org/I2799803557","https://openalex.org/I71999127","https://openalex.org/I9617848"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002873993","display_name":"Damjan Cicin-Sain","orcid":null},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Damjan Cicin-Sain","raw_affiliation_strings":["1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Barcelona Science Park, Josep Samitier 1-5, Barcelona 08028 and Barcelona Supercomputing Centre, 2National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 31, Barcelona 08034, Spain, 3National Institute of Bioinformatics, Structural Bioinformatics, Josep Samitier 1-5 and 4Department of Biochemistry and Molecular Biology, University of Barcelona, Av Diagonal 645, Barcelona 08028, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Barcelona Science Park, Josep Samitier 1-5, Barcelona 08028 and Barcelona Supercomputing Centre, 2National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 31, Barcelona 08034, Spain, 3National Institute of Bioinformatics, Structural Bioinformatics, Josep Samitier 1-5 and 4Department of Biochemistry and Molecular Biology, University of Barcelona, Av Diagonal 645, Barcelona 08028, Spain","institution_ids":["https://openalex.org/I2799803557","https://openalex.org/I71999127","https://openalex.org/I9617848"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064994528","display_name":"Marco D\u2019Abramo","orcid":"https://orcid.org/0000-0001-6020-8581"},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Marco D'Abramo","raw_affiliation_strings":["1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Barcelona Science Park, Josep Samitier 1-5, Barcelona 08028 and Barcelona Supercomputing Centre, 2National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 31, Barcelona 08034, Spain, 3National Institute of Bioinformatics, Structural Bioinformatics, Josep Samitier 1-5 and 4Department of Biochemistry and Molecular Biology, University of Barcelona, Av Diagonal 645, Barcelona 08028, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Barcelona Science Park, Josep Samitier 1-5, Barcelona 08028 and Barcelona Supercomputing Centre, 2National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 31, Barcelona 08034, Spain, 3National Institute of Bioinformatics, Structural Bioinformatics, Josep Samitier 1-5 and 4Department of Biochemistry and Molecular Biology, University of Barcelona, Av Diagonal 645, Barcelona 08028, Spain","institution_ids":["https://openalex.org/I2799803557","https://openalex.org/I71999127","https://openalex.org/I9617848"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088134705","display_name":"Josep Lluis Gelp\u00ed","orcid":"https://orcid.org/0000-0002-0566-7723"},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Josep Llu\u00eds Gelp\u00ed","raw_affiliation_strings":["1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Barcelona Science Park, Josep Samitier 1-5, Barcelona 08028 and Barcelona Supercomputing Centre, 2National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 31, Barcelona 08034, Spain, 3National Institute of Bioinformatics, Structural Bioinformatics, Josep Samitier 1-5 and 4Department of Biochemistry and Molecular Biology, University of Barcelona, Av Diagonal 645, Barcelona 08028, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Barcelona Science Park, Josep Samitier 1-5, Barcelona 08028 and Barcelona Supercomputing Centre, 2National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 31, Barcelona 08034, Spain, 3National Institute of Bioinformatics, Structural Bioinformatics, Josep Samitier 1-5 and 4Department of Biochemistry and Molecular Biology, University of Barcelona, Av Diagonal 645, Barcelona 08028, Spain","institution_ids":["https://openalex.org/I2799803557","https://openalex.org/I71999127","https://openalex.org/I9617848"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006399866","display_name":"Modesto Orozco","orcid":"https://orcid.org/0000-0002-8608-3278"},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Modesto Orozco","raw_affiliation_strings":["1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Barcelona Science Park, Josep Samitier 1-5, Barcelona 08028 and Barcelona Supercomputing Centre, 2National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 31, Barcelona 08034, Spain, 3National Institute of Bioinformatics, Structural Bioinformatics, Josep Samitier 1-5 and 4Department of Biochemistry and Molecular Biology, University of Barcelona, Av Diagonal 645, Barcelona 08028, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Barcelona Science Park, Josep Samitier 1-5, Barcelona 08028 and Barcelona Supercomputing Centre, 2National Institute of Bioinformatics, Computational Bioinformatics, Jordi Girona 31, Barcelona 08034, Spain, 3National Institute of Bioinformatics, Structural Bioinformatics, Josep Samitier 1-5 and 4Department of Biochemistry and Molecular Biology, University of Barcelona, Av Diagonal 645, Barcelona 08028, Spain","institution_ids":["https://openalex.org/I2799803557","https://openalex.org/I71999127","https://openalex.org/I9617848"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5006399866","https://openalex.org/A5088134705"],"corresponding_institution_ids":["https://openalex.org/I2799803557","https://openalex.org/I71999127","https://openalex.org/I9617848"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":3.0226,"has_fulltext":true,"cited_by_count":87,"citation_normalized_percentile":{"value":0.91899472,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"25","issue":"13","first_page":"1709","last_page":"1710"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.4401000142097473,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.4401000142097473,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.03689999878406525,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11520","display_name":"Advanced Thermodynamics and Statistical Mechanics","score":0.03590000048279762,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/flexibility","display_name":"Flexibility (engineering)","score":0.7379266619682312},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6903277635574341},{"id":"https://openalex.org/keywords/graphics","display_name":"Graphics","score":0.5879137516021729},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.49624115228652954},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics","score":0.48162955045700073},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.4402739703655243},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.4346623718738556},{"id":"https://openalex.org/keywords/brownian-dynamics","display_name":"Brownian dynamics","score":0.4163486361503601},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.35191917419433594},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.25972312688827515},{"id":"https://openalex.org/keywords/brownian-motion","display_name":"Brownian motion","score":0.23607602715492249},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1758520007133484},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.17526742815971375},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.16909292340278625},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.10674363374710083}],"concepts":[{"id":"https://openalex.org/C2780598303","wikidata":"https://www.wikidata.org/wiki/Q65921492","display_name":"Flexibility (engineering)","level":2,"score":0.7379266619682312},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6903277635574341},{"id":"https://openalex.org/C21442007","wikidata":"https://www.wikidata.org/wiki/Q1027879","display_name":"Graphics","level":2,"score":0.5879137516021729},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.49624115228652954},{"id":"https://openalex.org/C77660652","wikidata":"https://www.wikidata.org/wiki/Q150971","display_name":"Computer graphics","level":2,"score":0.48162955045700073},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.4402739703655243},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.4346623718738556},{"id":"https://openalex.org/C130603088","wikidata":"https://www.wikidata.org/wiki/Q4976526","display_name":"Brownian dynamics","level":3,"score":0.4163486361503601},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.35191917419433594},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.25972312688827515},{"id":"https://openalex.org/C112401455","wikidata":"https://www.wikidata.org/wiki/Q178036","display_name":"Brownian motion","level":2,"score":0.23607602715492249},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1758520007133484},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.17526742815971375},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.16909292340278625},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.10674363374710083},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btp304","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp304","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/13/1709/48996704/bioinformatics_25_13_1709.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19429600","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19429600","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:iris.uniroma1.it:11573/982815","is_oa":true,"landing_page_url":"http://hdl.handle.net/11573/982815","pdf_url":"https://academic.oup.com/bioinformatics/article-lookup/doi/10.1093/bioinformatics/btp304","source":{"id":"https://openalex.org/S4377196107","display_name":"IRIS Research product catalog (Sapienza University of Rome)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btp304","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp304","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/13/1709/48996704/bioinformatics_25_13_1709.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2112712631.pdf","grobid_xml":"https://content.openalex.org/works/W2112712631.grobid-xml"},"referenced_works_count":20,"referenced_works":["https://openalex.org/W1582833325","https://openalex.org/W2000475448","https://openalex.org/W2002001977","https://openalex.org/W2023857477","https://openalex.org/W2028968631","https://openalex.org/W2030589493","https://openalex.org/W2031616354","https://openalex.org/W2051893115","https://openalex.org/W2055043387","https://openalex.org/W2067337097","https://openalex.org/W2069777230","https://openalex.org/W2074400988","https://openalex.org/W2079199763","https://openalex.org/W2113994268","https://openalex.org/W2118780761","https://openalex.org/W2119822484","https://openalex.org/W2130479394","https://openalex.org/W2132589721","https://openalex.org/W2161062388","https://openalex.org/W4211054902"],"related_works":["https://openalex.org/W4236696095","https://openalex.org/W3143779693","https://openalex.org/W2626808643","https://openalex.org/W3103727510","https://openalex.org/W2082398983","https://openalex.org/W4293054118","https://openalex.org/W4233461976","https://openalex.org/W2987323350","https://openalex.org/W2086893361","https://openalex.org/W138892868"],"abstract_inverted_index":{"Abstract":[0],"Summary:":[1],"FlexServ":[2],"is":[3,85],"a":[4,50,56,88],"web-based":[5],"tool":[6],"for":[7,18],"the":[8,19],"analysis":[9,52],"of":[10,22,28,53,59],"protein":[11,23],"flexibility.":[12],"The":[13,47],"server":[14,48],"incorporates":[15],"powerful":[16],"protocols":[17],"coarse-grained":[20],"determination":[21],"dynamics":[24,34],"using":[25,55],"different":[26],"versions":[27],"Normal":[29],"Mode":[30],"Analysis":[31],"(NMA),":[32],"Brownian":[33],"(BD)":[35],"and":[36,95,109],"Discrete":[37],"Dynamics":[38],"(DMD).":[39],"It":[40],"can":[41,112],"also":[42],"analyze":[43],"user":[44],"provided":[45],"trajectories.":[46],"allows":[49],"complete":[51],"flexibility":[54],"large":[57],"variety":[58],"metrics,":[60],"including":[61],"basic":[62],"geometrical":[63],"analysis,":[64,69],"B-factors,":[65],"essential":[66],"dynamics,":[67],"stiffness":[68],"collectivity":[70],"measures,":[71],"Lindemann's":[72],"indexes,":[73],"residue":[74],"correlation,":[75],"chain-correlations,":[76],"dynamic":[77],"domain":[78],"determination,":[79],"hinge":[80],"point":[81],"detections,":[82],"etc.":[83],"Data":[84],"presented":[86],"through":[87],"web":[89],"interface":[90],"as":[91],"plain":[92],"text,":[93],"2D":[94],"3D":[96],"graphics.":[97],"Availability:":[98],"http://mmb.pcb.ub.es/FlexServ;":[99],"http://www.inab.org":[100],"Contact:":[101],"modesto@mmb.pcb.ub.es":[102],"or":[103],"gelpi@mmb.pcb.ub.es":[104],"Supplementary":[105],"information:":[106],"Additional":[107],"information":[108],"methodology":[110],"details":[111],"be":[113],"found":[114],"at":[115],"http://mmb.pcb.ub.es/FlexServ/help.":[116]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":9},{"year":2013,"cited_by_count":7},{"year":2012,"cited_by_count":14}],"updated_date":"2026-08-04T08:18:43.703281","created_date":"2025-10-10T00:00:00"}
