{"id":"https://openalex.org/W2139063835","doi":"https://doi.org/10.1093/bioinformatics/btp086","title":"CGAS: comparative genomic analysis server","display_name":"CGAS: comparative genomic analysis server","publication_year":2009,"publication_date":"2009-02-13","ids":{"openalex":"https://openalex.org/W2139063835","doi":"https://doi.org/10.1093/bioinformatics/btp086","mag":"2139063835","pmid":"https://pubmed.ncbi.nlm.nih.gov/19218352"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btp086","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp086","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/7/958/556704/btp086.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/25/7/958/556704/btp086.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5020657282","display_name":"Masumi Itoh","orcid":null},"institutions":[{"id":"https://openalex.org/I205349734","display_name":"Hokkaido University","ror":"https://ror.org/02e16g702","country_code":"JP","type":"education","lineage":["https://openalex.org/I205349734"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Masumi Itoh","raw_affiliation_strings":["Graduate School of Information Science and Technology, Hokkaido University, Sapporo, Hokkaido 060-0814, Japan"],"affiliations":[{"raw_affiliation_string":"Graduate School of Information Science and Technology, Hokkaido University, Sapporo, Hokkaido 060-0814, Japan","institution_ids":["https://openalex.org/I205349734"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5009428960","display_name":"Hidemi Watanabe","orcid":null},"institutions":[{"id":"https://openalex.org/I205349734","display_name":"Hokkaido University","ror":"https://ror.org/02e16g702","country_code":"JP","type":"education","lineage":["https://openalex.org/I205349734"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hidemi Watanabe","raw_affiliation_strings":["Graduate School of Information Science and Technology, Hokkaido University, Sapporo, Hokkaido 060-0814, Japan","Graduate School of Information Science and Technology, Hokkaido University Sapporo, Hokkaido, 060-0814, Japan"],"affiliations":[{"raw_affiliation_string":"Graduate School of Information Science and Technology, Hokkaido University, Sapporo, Hokkaido 060-0814, Japan","institution_ids":["https://openalex.org/I205349734"]},{"raw_affiliation_string":"Graduate School of Information Science and Technology, Hokkaido University Sapporo, Hokkaido, 060-0814, Japan","institution_ids":["https://openalex.org/I205349734"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5020657282"],"corresponding_institution_ids":["https://openalex.org/I205349734"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.4032,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.64181498,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"25","issue":"7","first_page":"958","last_page":"959"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9936000108718872,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.987500011920929,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7655782699584961},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.6573257446289062},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.6062783002853394},{"id":"https://openalex.org/keywords/javascript","display_name":"JavaScript","score":0.597311794757843},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.5792216658592224},{"id":"https://openalex.org/keywords/user-interface","display_name":"User interface","score":0.48762431740760803},{"id":"https://openalex.org/keywords/java","display_name":"Java","score":0.47406286001205444},{"id":"https://openalex.org/keywords/graphical-user-interface","display_name":"Graphical user interface","score":0.47190648317337036},{"id":"https://openalex.org/keywords/personalization","display_name":"Personalization","score":0.4641522169113159},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.44480568170547485},{"id":"https://openalex.org/keywords/xml","display_name":"XML","score":0.43751439452171326},{"id":"https://openalex.org/keywords/biological-database","display_name":"Biological database","score":0.43516626954078674},{"id":"https://openalex.org/keywords/ajax","display_name":"Ajax","score":0.42607253789901733},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.42070138454437256},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.32024306058883667},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.3188367486000061},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.21102389693260193},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.2066936492919922},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.19432854652404785},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.17149031162261963},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.14537689089775085}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7655782699584961},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.6573257446289062},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.6062783002853394},{"id":"https://openalex.org/C544833334","wikidata":"https://www.wikidata.org/wiki/Q2005","display_name":"JavaScript","level":2,"score":0.597311794757843},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.5792216658592224},{"id":"https://openalex.org/C89505385","wikidata":"https://www.wikidata.org/wiki/Q47146","display_name":"User interface","level":2,"score":0.48762431740760803},{"id":"https://openalex.org/C548217200","wikidata":"https://www.wikidata.org/wiki/Q251","display_name":"Java","level":2,"score":0.47406286001205444},{"id":"https://openalex.org/C37789001","wikidata":"https://www.wikidata.org/wiki/Q782543","display_name":"Graphical user interface","level":2,"score":0.47190648317337036},{"id":"https://openalex.org/C183003079","wikidata":"https://www.wikidata.org/wiki/Q1000371","display_name":"Personalization","level":2,"score":0.4641522169113159},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.44480568170547485},{"id":"https://openalex.org/C8797682","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"XML","level":2,"score":0.43751439452171326},{"id":"https://openalex.org/C20901353","wikidata":"https://www.wikidata.org/wiki/Q4117139","display_name":"Biological database","level":2,"score":0.43516626954078674},{"id":"https://openalex.org/C504723692","wikidata":"https://www.wikidata.org/wiki/Q134471","display_name":"Ajax","level":3,"score":0.42607253789901733},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.42070138454437256},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.32024306058883667},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.3188367486000061},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.21102389693260193},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.2066936492919922},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.19432854652404785},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.17149031162261963},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.14537689089775085},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055028","descriptor_name":"Comparative Genomic Hybridization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055028","descriptor_name":"Comparative Genomic Hybridization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055028","descriptor_name":"Comparative Genomic Hybridization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btp086","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp086","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/7/958/556704/btp086.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19218352","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19218352","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:2660877","is_oa":true,"landing_page_url":"http://doi.org/10.1093/bioinformatics/btp086","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btp086","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp086","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/7/958/556704/btp086.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2139063835.pdf","grobid_xml":"https://content.openalex.org/works/W2139063835.grobid-xml"},"referenced_works_count":11,"referenced_works":["https://openalex.org/W1964918240","https://openalex.org/W2035625064","https://openalex.org/W2035634951","https://openalex.org/W2104726518","https://openalex.org/W2106391842","https://openalex.org/W2117958760","https://openalex.org/W2122479165","https://openalex.org/W2143249496","https://openalex.org/W2158714788","https://openalex.org/W2168783124","https://openalex.org/W2740984310"],"related_works":["https://openalex.org/W1968806268","https://openalex.org/W3006601746","https://openalex.org/W2357618776","https://openalex.org/W2365887366","https://openalex.org/W2607205731","https://openalex.org/W45636419","https://openalex.org/W2168316093","https://openalex.org/W34532390","https://openalex.org/W2227740733","https://openalex.org/W2139063835"],"abstract_inverted_index":{"CGAS":[0],"is":[1],"available":[2],"at":[3],"http://cgas.ist.hokudai.ac.jp/.":[4]},"counts_by_year":[],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
