{"id":"https://openalex.org/W2135165704","doi":"https://doi.org/10.1093/bioinformatics/btp077","title":"Allergen Atlas: a comprehensive knowledge center and analysis resource for allergen information","display_name":"Allergen Atlas: a comprehensive knowledge center and analysis resource for allergen information","publication_year":2009,"publication_date":"2009-02-11","ids":{"openalex":"https://openalex.org/W2135165704","doi":"https://doi.org/10.1093/bioinformatics/btp077","mag":"2135165704","pmid":"https://pubmed.ncbi.nlm.nih.gov/19213741"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btp077","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp077","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/7/979/48983629/bioinformatics_25_7_979.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/25/7/979/48983629/bioinformatics_25_7_979.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5108219528","display_name":"Joo Chuan Tong","orcid":null},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]},{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Joo Chuan Tong","raw_affiliation_strings":["1 Data Mining Department, Institute for Infocomm Research, 1 Fusionopolis Way, #21-01 Connexis, South Tower, Singapore 138632, 2Department of Biochemistry, Yong Loo Lin School of Medicine and 3Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Data Mining Department, Institute for Infocomm Research, 1 Fusionopolis Way, #21-01 Connexis, South Tower, Singapore 138632, 2Department of Biochemistry, Yong Loo Lin School of Medicine and 3Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543","institution_ids":["https://openalex.org/I3005327000","https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054108248","display_name":"Shen Jean Lim","orcid":"https://orcid.org/0000-0003-4578-5318"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]},{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Shen Jean Lim","raw_affiliation_strings":["1 Data Mining Department, Institute for Infocomm Research, 1 Fusionopolis Way, #21-01 Connexis, South Tower, Singapore 138632, 2Department of Biochemistry, Yong Loo Lin School of Medicine and 3Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Data Mining Department, Institute for Infocomm Research, 1 Fusionopolis Way, #21-01 Connexis, South Tower, Singapore 138632, 2Department of Biochemistry, Yong Loo Lin School of Medicine and 3Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543","institution_ids":["https://openalex.org/I3005327000","https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011798318","display_name":"Hon Cheng Muh","orcid":null},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]},{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Hon Cheng Muh","raw_affiliation_strings":["1 Data Mining Department, Institute for Infocomm Research, 1 Fusionopolis Way, #21-01 Connexis, South Tower, Singapore 138632, 2Department of Biochemistry, Yong Loo Lin School of Medicine and 3Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Data Mining Department, Institute for Infocomm Research, 1 Fusionopolis Way, #21-01 Connexis, South Tower, Singapore 138632, 2Department of Biochemistry, Yong Loo Lin School of Medicine and 3Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543","institution_ids":["https://openalex.org/I3005327000","https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060949001","display_name":"Fook Tim Chew","orcid":"https://orcid.org/0000-0003-1337-5146"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]},{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Fook Tim Chew","raw_affiliation_strings":["1 Data Mining Department, Institute for Infocomm Research, 1 Fusionopolis Way, #21-01 Connexis, South Tower, Singapore 138632, 2Department of Biochemistry, Yong Loo Lin School of Medicine and 3Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Data Mining Department, Institute for Infocomm Research, 1 Fusionopolis Way, #21-01 Connexis, South Tower, Singapore 138632, 2Department of Biochemistry, Yong Loo Lin School of Medicine and 3Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543","institution_ids":["https://openalex.org/I3005327000","https://openalex.org/I165932596"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5046347871","display_name":"Martti T. Tammi","orcid":null},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]},{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":true,"raw_author_name":"Martti T. Tammi","raw_affiliation_strings":["1 Data Mining Department, Institute for Infocomm Research, 1 Fusionopolis Way, #21-01 Connexis, South Tower, Singapore 138632, 2Department of Biochemistry, Yong Loo Lin School of Medicine and 3Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Data Mining Department, Institute for Infocomm Research, 1 Fusionopolis Way, #21-01 Connexis, South Tower, Singapore 138632, 2Department of Biochemistry, Yong Loo Lin School of Medicine and 3Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543","institution_ids":["https://openalex.org/I3005327000","https://openalex.org/I165932596"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5046347871"],"corresponding_institution_ids":["https://openalex.org/I165932596","https://openalex.org/I3005327000"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":1.0314,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.76144205,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"25","issue":"7","first_page":"979","last_page":"980"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10877","display_name":"Allergic Rhinitis and Sensitization","score":0.6615999937057495,"subfield":{"id":"https://openalex.org/subfields/2723","display_name":"Immunology and Allergy"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10877","display_name":"Allergic Rhinitis and Sensitization","score":0.6615999937057495,"subfield":{"id":"https://openalex.org/subfields/2723","display_name":"Immunology and Allergy"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10634","display_name":"Food Allergy and Anaphylaxis Research","score":0.19470000267028809,"subfield":{"id":"https://openalex.org/subfields/2723","display_name":"Immunology and Allergy"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11117","display_name":"Drug-Induced Adverse Reactions","score":0.031599998474121094,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/allergen","display_name":"Allergen","score":0.6746379137039185},{"id":"https://openalex.org/keywords/protein-data-bank","display_name":"Protein Data Bank (RCSB PDB)","score":0.6084370613098145},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5355446338653564},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4636138081550598},{"id":"https://openalex.org/keywords/uniprot","display_name":"UniProt","score":0.4569670557975769},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4478062093257904},{"id":"https://openalex.org/keywords/biological-database","display_name":"Biological database","score":0.42967870831489563},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.4198419153690338},{"id":"https://openalex.org/keywords/protein-data-bank","display_name":"Protein Data Bank","score":0.41869693994522095},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3912864625453949},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3239656984806061},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2955707311630249},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.252338707447052},{"id":"https://openalex.org/keywords/allergy","display_name":"Allergy","score":0.20276781916618347},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.18418172001838684},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.16678151488304138},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.13479959964752197},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09638664126396179},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.09043446183204651}],"concepts":[{"id":"https://openalex.org/C2780510475","wikidata":"https://www.wikidata.org/wiki/Q186752","display_name":"Allergen","level":3,"score":0.6746379137039185},{"id":"https://openalex.org/C65556437","wikidata":"https://www.wikidata.org/wiki/Q766195","display_name":"Protein Data Bank (RCSB PDB)","level":2,"score":0.6084370613098145},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5355446338653564},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4636138081550598},{"id":"https://openalex.org/C202264299","wikidata":"https://www.wikidata.org/wiki/Q905695","display_name":"UniProt","level":3,"score":0.4569670557975769},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4478062093257904},{"id":"https://openalex.org/C20901353","wikidata":"https://www.wikidata.org/wiki/Q4117139","display_name":"Biological database","level":2,"score":0.42967870831489563},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.4198419153690338},{"id":"https://openalex.org/C119145174","wikidata":"https://www.wikidata.org/wiki/Q7251429","display_name":"Protein Data Bank","level":3,"score":0.41869693994522095},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3912864625453949},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3239656984806061},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2955707311630249},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.252338707447052},{"id":"https://openalex.org/C207480886","wikidata":"https://www.wikidata.org/wiki/Q42982","display_name":"Allergy","level":2,"score":0.20276781916618347},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.18418172001838684},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.16678151488304138},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.13479959964752197},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09638664126396179},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.09043446183204651},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000485","descriptor_name":"Allergens","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000485","descriptor_name":"Allergens","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000485","descriptor_name":"Allergens","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/btp077","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp077","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/7/979/48983629/bioinformatics_25_7_979.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:19213741","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19213741","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:scholarbank.nus.edu.sg:10635/100034","is_oa":false,"landing_page_url":"http://scholarbank.nus.edu.sg/handle/10635/100034","pdf_url":null,"source":{"id":"https://openalex.org/S7407052290","display_name":"National University of Singapore","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Scopus","raw_type":"Article"},{"id":"pmh:oai:scholarbank.nus.edu.sg:10635/28797","is_oa":false,"landing_page_url":"http://scholarbank.nus.edu.sg/handle/10635/28797","pdf_url":null,"source":{"id":"https://openalex.org/S7407052290","display_name":"National University of Singapore","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Scopus","raw_type":"Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2660874","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2660874","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btp077","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btp077","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/7/979/48983629/bioinformatics_25_7_979.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320698","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2135165704.pdf","grobid_xml":"https://content.openalex.org/works/W2135165704.grobid-xml"},"referenced_works_count":20,"referenced_works":["https://openalex.org/W19412885","https://openalex.org/W179910592","https://openalex.org/W1795576732","https://openalex.org/W2000748118","https://openalex.org/W2011851620","https://openalex.org/W2055043387","https://openalex.org/W2103017472","https://openalex.org/W2112874093","https://openalex.org/W2130245724","https://openalex.org/W2130479394","https://openalex.org/W2132116179","https://openalex.org/W2141885858","https://openalex.org/W2145675263","https://openalex.org/W2148853951","https://openalex.org/W2158714788","https://openalex.org/W2161529001","https://openalex.org/W2161732286","https://openalex.org/W2168518560","https://openalex.org/W2462890753","https://openalex.org/W3191676131"],"related_works":["https://openalex.org/W3181892255","https://openalex.org/W3132544722","https://openalex.org/W4232154957","https://openalex.org/W4292058683","https://openalex.org/W4376646754","https://openalex.org/W4307362031","https://openalex.org/W4389222350","https://openalex.org/W4375844720","https://openalex.org/W2022209941","https://openalex.org/W4205671017"],"abstract_inverted_index":{"SUMMARY:":[0],"A":[1],"variety":[2],"of":[3,13,22,34,44,114,128],"specialist":[4,63],"databases":[5,17,75],"have":[6],"been":[7],"developed":[8],"to":[9,73,149,155],"facilitate":[10],"the":[11],"study":[12],"allergens.":[14],"However,":[15],"these":[16],"either":[18],"contain":[19],"different":[20],"subsets":[21],"allergen":[23,47,115,130],"data":[24,54,121],"or":[25],"are":[26],"deficient":[27],"in":[28],"tools":[29,94],"for":[30],"assessing":[31],"potential":[32],"allergenicity":[33],"proteins.":[35],"Here,":[36],"we":[37],"describe":[38],"Allergen":[39,159],"Atlas,":[40],"a":[41],"comprehensive":[42],"repository":[43],"experimentally":[45,136],"validated":[46],"sequences":[48,131],"collected":[49],"from":[50],"in-house":[51],"laboratory,":[52],"online":[53,120],"submission,":[55],"literature":[56],"reports":[57],"and":[58,62,71,86,118,139,152],"all":[59],"existing":[60],"general-purpose":[61],"databases.":[64],"Each":[65],"entry":[66],"was":[67],"manually":[68],"verified,":[69],"classified":[70],"hyperlinked":[72],"major":[74],"including":[76],"Swiss-Prot,":[77],"Protein":[78],"Data":[79],"Bank":[80],"(PDB),":[81],"Gene":[82],"Ontology":[83],"(GO),":[84],"Pfam":[85,156],"PubMed.":[87],"The":[88,123],"database":[89],"is":[90,161],"integrated":[91],"with":[92],"analysis":[93],"that":[95],"include:":[96],"(i)":[97],"keyword":[98],"search,":[99,110],"(ii)":[100],"BLAST,":[101],"(iii)":[102],"position-specific":[103],"iterative":[104],"BLAST":[105],"(PSI-BLAST),":[106],"(iv)":[107],"FAO/WHO":[108],"criteria":[109],"(v)":[111],"graphical":[112],"representation":[113],"information":[116,127],"network":[117],"(vi)":[119],"submission.":[122],"latest":[124],"version":[125],"contains":[126],"1593":[129],"(496":[132],"IUIS":[133],"allergens,":[134],"978":[135],"verified":[137],"allergens":[138],"119":[140],"new":[141],"sequences),":[142],"56":[143],"IgE":[144],"epitope":[145],"sequences,":[146],"679":[147],"links":[148,154],"PDB":[150],"structures":[151],"155":[153],"domains.":[157],"AVAILABILITY:":[158],"Atlas":[160],"freely":[162],"available":[163],"at":[164],"http://tiger.dbs.nus.edu.sg/ATLAS/.":[165]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2013,"cited_by_count":2}],"updated_date":"2026-07-02T09:51:11.867554","created_date":"2025-10-10T00:00:00"}
