{"id":"https://openalex.org/W2145701395","doi":"https://doi.org/10.1093/bioinformatics/btn535","title":"In response to comment on \u2018A congruence index for testing topological similarity between trees\u2019","display_name":"In response to comment on \u2018A congruence index for testing topological similarity between trees\u2019","publication_year":2008,"publication_date":"2008-10-17","ids":{"openalex":"https://openalex.org/W2145701395","doi":"https://doi.org/10.1093/bioinformatics/btn535","mag":"2145701395"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btn535","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn535","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/1/150/48982189/bioinformatics_25_1_150.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/25/1/150/48982189/bioinformatics_25_1_150.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5051696956","display_name":"Damien M. de Vienne","orcid":"https://orcid.org/0000-0001-9532-5251"},"institutions":[{"id":"https://openalex.org/I4210144804","display_name":"Laboratoire de Recherche en Informatique","ror":"https://ror.org/04e3ktk27","country_code":"FR","type":"facility","lineage":["https://openalex.org/I102197404","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I4210144804","https://openalex.org/I4210159245"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210097733","display_name":"Laboratoire de Physique Th\u00e9orique et Mod\u00e8les Statistiques","ror":"https://ror.org/00w67e447","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I277688954","https://openalex.org/I4210097733"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Damien M. de Vienne","raw_affiliation_strings":["1 Univ Paris-Sud, Laboratoire de Recherche en Informatique, UMR8623, Orsay F-91405; CNRS, Orsay F-91405, 2Univ Paris-Sud, UMR8626, LPTMS, Orsay F-91405; CNRS, Orsay F-91405 and 3Univ Paris-Sud, UMR8120, Laboratoire de G\u00e9n\u00e9tique V\u00e9g\u00e9tale du Moulon, Gif-sur-Yvette F-91190, France","CNRS, Orsay F-91405, 2Univ Paris-Sud, UMR8626, LPTMS, Orsay F-91405"],"affiliations":[{"raw_affiliation_string":"1 Univ Paris-Sud, Laboratoire de Recherche en Informatique, UMR8623, Orsay F-91405; CNRS, Orsay F-91405, 2Univ Paris-Sud, UMR8626, LPTMS, Orsay F-91405; CNRS, Orsay F-91405 and 3Univ Paris-Sud, UMR8120, Laboratoire de G\u00e9n\u00e9tique V\u00e9g\u00e9tale du Moulon, Gif-sur-Yvette F-91190, France","institution_ids":["https://openalex.org/I4210144804","https://openalex.org/I4210097733","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"CNRS, Orsay F-91405, 2Univ Paris-Sud, UMR8626, LPTMS, Orsay F-91405","institution_ids":["https://openalex.org/I4210097733","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062611747","display_name":"Tatiana Giraud","orcid":"https://orcid.org/0000-0002-2685-6478"},"institutions":[{"id":"https://openalex.org/I4210144804","display_name":"Laboratoire de Recherche en Informatique","ror":"https://ror.org/04e3ktk27","country_code":"FR","type":"facility","lineage":["https://openalex.org/I102197404","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I4210144804","https://openalex.org/I4210159245"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210097733","display_name":"Laboratoire de Physique Th\u00e9orique et Mod\u00e8les Statistiques","ror":"https://ror.org/00w67e447","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I277688954","https://openalex.org/I4210097733"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Tatiana Giraud","raw_affiliation_strings":["1 Univ Paris-Sud, Laboratoire de Recherche en Informatique, UMR8623, Orsay F-91405; CNRS, Orsay F-91405, 2Univ Paris-Sud, UMR8626, LPTMS, Orsay F-91405; CNRS, Orsay F-91405 and 3Univ Paris-Sud, UMR8120, Laboratoire de G\u00e9n\u00e9tique V\u00e9g\u00e9tale du Moulon, Gif-sur-Yvette F-91190, France","CNRS, Orsay F-91405, 2Univ Paris-Sud, UMR8626, LPTMS, Orsay F-91405"],"affiliations":[{"raw_affiliation_string":"1 Univ Paris-Sud, Laboratoire de Recherche en Informatique, UMR8623, Orsay F-91405; CNRS, Orsay F-91405, 2Univ Paris-Sud, UMR8626, LPTMS, Orsay F-91405; CNRS, Orsay F-91405 and 3Univ Paris-Sud, UMR8120, Laboratoire de G\u00e9n\u00e9tique V\u00e9g\u00e9tale du Moulon, Gif-sur-Yvette F-91190, France","institution_ids":["https://openalex.org/I4210144804","https://openalex.org/I4210097733","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"CNRS, Orsay F-91405, 2Univ Paris-Sud, UMR8626, LPTMS, Orsay F-91405","institution_ids":["https://openalex.org/I4210097733","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5005002059","display_name":"Olivier Martin","orcid":"https://orcid.org/0000-0002-5295-5963"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210097733","display_name":"Laboratoire de Physique Th\u00e9orique et Mod\u00e8les Statistiques","ror":"https://ror.org/00w67e447","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I277688954","https://openalex.org/I4210097733"]},{"id":"https://openalex.org/I4210144804","display_name":"Laboratoire de Recherche en Informatique","ror":"https://ror.org/04e3ktk27","country_code":"FR","type":"facility","lineage":["https://openalex.org/I102197404","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I4210144804","https://openalex.org/I4210159245"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Olivier C. Martin","raw_affiliation_strings":["1 Univ Paris-Sud, Laboratoire de Recherche en Informatique, UMR8623, Orsay F-91405; CNRS, Orsay F-91405, 2Univ Paris-Sud, UMR8626, LPTMS, Orsay F-91405; CNRS, Orsay F-91405 and 3Univ Paris-Sud, UMR8120, Laboratoire de G\u00e9n\u00e9tique V\u00e9g\u00e9tale du Moulon, Gif-sur-Yvette F-91190, France"],"affiliations":[{"raw_affiliation_string":"1 Univ Paris-Sud, Laboratoire de Recherche en Informatique, UMR8623, Orsay F-91405; CNRS, Orsay F-91405, 2Univ Paris-Sud, UMR8626, LPTMS, Orsay F-91405; CNRS, Orsay F-91405 and 3Univ Paris-Sud, UMR8120, Laboratoire de G\u00e9n\u00e9tique V\u00e9g\u00e9tale du Moulon, Gif-sur-Yvette F-91190, France","institution_ids":["https://openalex.org/I4210144804","https://openalex.org/I4210097733","https://openalex.org/I1294671590"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5051696956"],"corresponding_institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I4210097733","https://openalex.org/I4210144804"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.2693,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.60295406,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"25","issue":"1","first_page":"150","last_page":"151"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9236999750137329,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9236999750137329,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/congruence","display_name":"Congruence (geometry)","score":0.9178982973098755},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.6192050576210022},{"id":"https://openalex.org/keywords/index","display_name":"Index (typography)","score":0.5481231808662415},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.49079689383506775},{"id":"https://openalex.org/keywords/topological-index","display_name":"Topological index","score":0.48143360018730164},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.42109352350234985},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.34352195262908936},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.226851224899292},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.20849338173866272},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.07546332478523254}],"concepts":[{"id":"https://openalex.org/C132074034","wikidata":"https://www.wikidata.org/wiki/Q154210","display_name":"Congruence (geometry)","level":2,"score":0.9178982973098755},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.6192050576210022},{"id":"https://openalex.org/C2777382242","wikidata":"https://www.wikidata.org/wiki/Q6017816","display_name":"Index (typography)","level":2,"score":0.5481231808662415},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.49079689383506775},{"id":"https://openalex.org/C159867001","wikidata":"https://www.wikidata.org/wiki/Q904942","display_name":"Topological index","level":2,"score":0.48143360018730164},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.42109352350234985},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.34352195262908936},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.226851224899292},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.20849338173866272},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.07546332478523254},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btn535","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn535","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/1/150/48982189/bioinformatics_25_1_150.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmh:oai:HAL:hal-01800068v1","is_oa":false,"landing_page_url":"https://hal.science/hal-01800068","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2008, 25 (1), pp.150--151. ⟨10.1093/bioinformatics/btn535⟩","raw_type":"Journal articles"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btn535","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn535","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/25/1/150/48982189/bioinformatics_25_1_150.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/13","display_name":"Climate action","score":0.41999998688697815}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2145701395.pdf","grobid_xml":"https://content.openalex.org/works/W2145701395.grobid-xml"},"referenced_works_count":10,"referenced_works":["https://openalex.org/W1972363794","https://openalex.org/W2114369768","https://openalex.org/W2124310341","https://openalex.org/W2126049893","https://openalex.org/W2138798117","https://openalex.org/W2178423356","https://openalex.org/W4230373755","https://openalex.org/W4240584342","https://openalex.org/W6678901352","https://openalex.org/W6685474928"],"related_works":["https://openalex.org/W2388471861","https://openalex.org/W2354789018","https://openalex.org/W2391316944","https://openalex.org/W4380684998","https://openalex.org/W4226251895","https://openalex.org/W3171917333","https://openalex.org/W2192998894","https://openalex.org/W4293665628","https://openalex.org/W4213380946","https://openalex.org/W4255628164"],"abstract_inverted_index":{"Abstract":[0],"Contact:":[1],"damien.de-vienne@lri.fr":[2]},"counts_by_year":[{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}