{"id":"https://openalex.org/W2119993590","doi":"https://doi.org/10.1093/bioinformatics/btn392","title":"HELIQUEST: a web server to screen sequences with specific \u03b1-helical properties","display_name":"HELIQUEST: a web server to screen sequences with specific \u03b1-helical properties","publication_year":2008,"publication_date":"2008-07-28","ids":{"openalex":"https://openalex.org/W2119993590","doi":"https://doi.org/10.1093/bioinformatics/btn392","mag":"2119993590","pmid":"https://pubmed.ncbi.nlm.nih.gov/18662927"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btn392","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn392","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/24/18/2101/49049934/bioinformatics_24_18_2101.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/24/18/2101/49049934/bioinformatics_24_18_2101.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5047355495","display_name":"Romain Gautier","orcid":"https://orcid.org/0000-0001-6678-132X"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210160500","display_name":"Institut de Pharmacologie Mol\u00e9culaire et Cellulaire","ror":"https://ror.org/05k4ema52","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I201841394","https://openalex.org/I4210096427","https://openalex.org/I4210160500"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Romain Gautier","raw_affiliation_strings":["Institut de Pharmacologie Mol\u00e9culaire et Cellulaire, Universit\u00e9 de Nice Sophia Antipolis and CNRS, 660 route des Lucioles, 06560 Valbonne, France"],"affiliations":[{"raw_affiliation_string":"Institut de Pharmacologie Mol\u00e9culaire et Cellulaire, Universit\u00e9 de Nice Sophia Antipolis and CNRS, 660 route des Lucioles, 06560 Valbonne, France","institution_ids":["https://openalex.org/I4210160500","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007296484","display_name":"Dominique Douguet","orcid":"https://orcid.org/0000-0001-6209-6464"},"institutions":[{"id":"https://openalex.org/I4210160500","display_name":"Institut de Pharmacologie Mol\u00e9culaire et Cellulaire","ror":"https://ror.org/05k4ema52","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I201841394","https://openalex.org/I4210096427","https://openalex.org/I4210160500"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Dominique Douguet","raw_affiliation_strings":["Institut de Pharmacologie Mol\u00e9culaire et Cellulaire, Universit\u00e9 de Nice Sophia Antipolis and CNRS, 660 route des Lucioles, 06560 Valbonne, France"],"affiliations":[{"raw_affiliation_string":"Institut de Pharmacologie Mol\u00e9culaire et Cellulaire, Universit\u00e9 de Nice Sophia Antipolis and CNRS, 660 route des Lucioles, 06560 Valbonne, France","institution_ids":["https://openalex.org/I4210160500","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015619870","display_name":"Bruno Antonny","orcid":"https://orcid.org/0000-0002-9166-8668"},"institutions":[{"id":"https://openalex.org/I4210160500","display_name":"Institut de Pharmacologie Mol\u00e9culaire et Cellulaire","ror":"https://ror.org/05k4ema52","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I201841394","https://openalex.org/I4210096427","https://openalex.org/I4210160500"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Bruno Antonny","raw_affiliation_strings":["Institut de Pharmacologie Mol\u00e9culaire et Cellulaire, Universit\u00e9 de Nice Sophia Antipolis and CNRS, 660 route des Lucioles, 06560 Valbonne, France"],"affiliations":[{"raw_affiliation_string":"Institut de Pharmacologie Mol\u00e9culaire et Cellulaire, Universit\u00e9 de Nice Sophia Antipolis and CNRS, 660 route des Lucioles, 06560 Valbonne, France","institution_ids":["https://openalex.org/I4210160500","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5078222862","display_name":"Guillaume Drin","orcid":"https://orcid.org/0000-0002-3484-4581"},"institutions":[{"id":"https://openalex.org/I4210160500","display_name":"Institut de Pharmacologie Mol\u00e9culaire et Cellulaire","ror":"https://ror.org/05k4ema52","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I201841394","https://openalex.org/I4210096427","https://openalex.org/I4210160500"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Guillaume Drin","raw_affiliation_strings":["Institut de Pharmacologie Mol\u00e9culaire et Cellulaire, Universit\u00e9 de Nice Sophia Antipolis and CNRS, 660 route des Lucioles, 06560 Valbonne, France"],"affiliations":[{"raw_affiliation_string":"Institut de Pharmacologie Mol\u00e9culaire et Cellulaire, Universit\u00e9 de Nice Sophia Antipolis and CNRS, 660 route des Lucioles, 06560 Valbonne, France","institution_ids":["https://openalex.org/I4210160500","https://openalex.org/I1294671590"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5047355495"],"corresponding_institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I4210160500"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":3.4575,"has_fulltext":false,"cited_by_count":1204,"citation_normalized_percentile":{"value":0.93055776,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"24","issue":"18","first_page":"2101","last_page":"2102"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.7196053266525269},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6555970311164856},{"id":"https://openalex.org/keywords/helix","display_name":"Helix (gastropod)","score":0.4380720853805542},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4354712665081024},{"id":"https://openalex.org/keywords/genetic-algorithm","display_name":"Genetic algorithm","score":0.4229528605937958},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.37642791867256165},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.33119261264801025},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.2455679476261139},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.22532525658607483},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.19186681509017944},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.05985516309738159}],"concepts":[{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.7196053266525269},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6555970311164856},{"id":"https://openalex.org/C2778530040","wikidata":"https://www.wikidata.org/wiki/Q1937315","display_name":"Helix (gastropod)","level":3,"score":0.4380720853805542},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4354712665081024},{"id":"https://openalex.org/C8880873","wikidata":"https://www.wikidata.org/wiki/Q187787","display_name":"Genetic algorithm","level":2,"score":0.4229528605937958},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.37642791867256165},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.33119261264801025},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.2455679476261139},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.22532525658607483},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.19186681509017944},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.05985516309738159},{"id":"https://openalex.org/C2779965526","wikidata":"https://www.wikidata.org/wiki/Q308841","display_name":"Snail","level":2,"score":0.0},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btn392","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn392","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/24/18/2101/49049934/bioinformatics_24_18_2101.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:18662927","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18662927","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:HAL:hal-00311956v1","is_oa":false,"landing_page_url":"https://hal.science/hal-00311956","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2008, epub ahead of print. &#x27E8;10.1093/bioinformatics/btn392&#x27E9;","raw_type":"Journal articles"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btn392","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn392","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/24/18/2101/49049934/bioinformatics_24_18_2101.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2119993590.pdf","grobid_xml":"https://content.openalex.org/works/W2119993590.grobid-xml"},"referenced_works_count":15,"referenced_works":["https://openalex.org/W1971024387","https://openalex.org/W1972640555","https://openalex.org/W1984250381","https://openalex.org/W2014069822","https://openalex.org/W2028202049","https://openalex.org/W2043312574","https://openalex.org/W2056236390","https://openalex.org/W2072167784","https://openalex.org/W2074266029","https://openalex.org/W2083183071","https://openalex.org/W2121464522","https://openalex.org/W2148853951","https://openalex.org/W2152770371","https://openalex.org/W2153187042","https://openalex.org/W3182520187"],"related_works":["https://openalex.org/W1993952492","https://openalex.org/W2322773924","https://openalex.org/W2031298316","https://openalex.org/W2361811528","https://openalex.org/W2162254443","https://openalex.org/W2968547367","https://openalex.org/W2003903287","https://openalex.org/W2038862514","https://openalex.org/W4384389741","https://openalex.org/W4389988342"],"abstract_inverted_index":{"http://heliquest.ipmc.cnrs.fr.":[0]},"counts_by_year":[{"year":2026,"cited_by_count":23},{"year":2025,"cited_by_count":130},{"year":2024,"cited_by_count":138},{"year":2023,"cited_by_count":134},{"year":2022,"cited_by_count":133},{"year":2021,"cited_by_count":125},{"year":2020,"cited_by_count":95},{"year":2019,"cited_by_count":71},{"year":2018,"cited_by_count":84},{"year":2017,"cited_by_count":64},{"year":2016,"cited_by_count":46},{"year":2015,"cited_by_count":45},{"year":2014,"cited_by_count":39},{"year":2013,"cited_by_count":27},{"year":2012,"cited_by_count":23}],"updated_date":"2026-04-03T22:45:19.894376","created_date":"2016-06-24T00:00:00"}
