{"id":"https://openalex.org/W2116012423","doi":"https://doi.org/10.1093/bioinformatics/btn349","title":"Classification with reject option in gene expression data","display_name":"Classification with reject option in gene expression data","publication_year":2008,"publication_date":"2008-07-10","ids":{"openalex":"https://openalex.org/W2116012423","doi":"https://doi.org/10.1093/bioinformatics/btn349","mag":"2116012423","pmid":"https://pubmed.ncbi.nlm.nih.gov/18621758"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btn349","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn349","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/24/17/1889/49051334/bioinformatics_24_17_1889.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/24/17/1889/49051334/bioinformatics_24_17_1889.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008999121","display_name":"Blaise Hanczar","orcid":"https://orcid.org/0000-0002-5606-8296"},"institutions":[{"id":"https://openalex.org/I1284308235","display_name":"Translational Genomics Research Institute","ror":"https://ror.org/02hfpnk21","country_code":"US","type":"facility","lineage":["https://openalex.org/I1284308235"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210091279","display_name":"Universit\u00e9 Sorbonne Paris Nord","ror":"https://ror.org/0199hds37","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210091279"]},{"id":"https://openalex.org/I4210092322","display_name":"Centre de Recherche des Cordeliers","ror":"https://ror.org/00dmms154","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I39804081","https://openalex.org/I4210092322"]},{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["FR","US"],"is_corresponding":true,"raw_author_name":"Blaise Hanczar","raw_affiliation_strings":["1 Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX 77843, USA, 2Laboratoire d'Informatique Medicale et Bioinformatique (Lim&Bio), Universite Paris 13, 93017 Bobigny, France, 3INSERM, U872, Equipe7 nutriomique, centre de recherche des Cordelier, Universit\u00e9 Pierre et Marie Curie, 75004 Paris, France and 4Computational Biology Division, Translational Genomics Research Institute, Phoenix, AZ 85004, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX 77843, USA, 2Laboratoire d'Informatique Medicale et Bioinformatique (Lim&Bio), Universite Paris 13, 93017 Bobigny, France, 3INSERM, U872, Equipe7 nutriomique, centre de recherche des Cordelier, Universit\u00e9 Pierre et Marie Curie, 75004 Paris, France and 4Computational Biology Division, Translational Genomics Research Institute, Phoenix, AZ 85004, USA","institution_ids":["https://openalex.org/I91045830","https://openalex.org/I1284308235","https://openalex.org/I4210091279","https://openalex.org/I39804081","https://openalex.org/I154526488","https://openalex.org/I4210092322"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5112221423","display_name":"Edward R. Dougherty","orcid":null},"institutions":[{"id":"https://openalex.org/I1284308235","display_name":"Translational Genomics Research Institute","ror":"https://ror.org/02hfpnk21","country_code":"US","type":"facility","lineage":["https://openalex.org/I1284308235"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210091279","display_name":"Universit\u00e9 Sorbonne Paris Nord","ror":"https://ror.org/0199hds37","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210091279"]},{"id":"https://openalex.org/I4210092322","display_name":"Centre de Recherche des Cordeliers","ror":"https://ror.org/00dmms154","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I39804081","https://openalex.org/I4210092322"]},{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["FR","US"],"is_corresponding":false,"raw_author_name":"Edward R. Dougherty","raw_affiliation_strings":["1 Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX 77843, USA, 2Laboratoire d'Informatique Medicale et Bioinformatique (Lim&Bio), Universite Paris 13, 93017 Bobigny, France, 3INSERM, U872, Equipe7 nutriomique, centre de recherche des Cordelier, Universit\u00e9 Pierre et Marie Curie, 75004 Paris, France and 4Computational Biology Division, Translational Genomics Research Institute, Phoenix, AZ 85004, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX 77843, USA, 2Laboratoire d'Informatique Medicale et Bioinformatique (Lim&Bio), Universite Paris 13, 93017 Bobigny, France, 3INSERM, U872, Equipe7 nutriomique, centre de recherche des Cordelier, Universit\u00e9 Pierre et Marie Curie, 75004 Paris, France and 4Computational Biology Division, Translational Genomics Research Institute, Phoenix, AZ 85004, USA","institution_ids":["https://openalex.org/I91045830","https://openalex.org/I1284308235","https://openalex.org/I4210091279","https://openalex.org/I39804081","https://openalex.org/I154526488","https://openalex.org/I4210092322"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5008999121"],"corresponding_institution_ids":["https://openalex.org/I1284308235","https://openalex.org/I154526488","https://openalex.org/I39804081","https://openalex.org/I4210091279","https://openalex.org/I4210092322","https://openalex.org/I91045830"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.5214,"has_fulltext":false,"cited_by_count":74,"citation_normalized_percentile":{"value":0.82056513,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"24","issue":"17","first_page":"1889","last_page":"1895"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12535","display_name":"Machine Learning and Data Classification","score":0.9958999752998352,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9925000071525574,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.824377715587616},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6568050980567932},{"id":"https://openalex.org/keywords/word-error-rate","display_name":"Word error rate","score":0.6004354953765869},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5843932628631592},{"id":"https://openalex.org/keywords/hyperplane","display_name":"Hyperplane","score":0.5832138061523438},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5679765939712524},{"id":"https://openalex.org/keywords/quadratic-classifier","display_name":"Quadratic classifier","score":0.5527921915054321},{"id":"https://openalex.org/keywords/linear-classifier","display_name":"Linear classifier","score":0.5488128066062927},{"id":"https://openalex.org/keywords/classification-rule","display_name":"Classification rule","score":0.5482327938079834},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.4696618318557739},{"id":"https://openalex.org/keywords/margin-classifier","display_name":"Margin classifier","score":0.4475755989551544},{"id":"https://openalex.org/keywords/feature-vector","display_name":"Feature vector","score":0.4451752305030823},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.42454826831817627},{"id":"https://openalex.org/keywords/feature-selection","display_name":"Feature selection","score":0.41043293476104736},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.23198240995407104}],"concepts":[{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.824377715587616},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6568050980567932},{"id":"https://openalex.org/C40969351","wikidata":"https://www.wikidata.org/wiki/Q3516228","display_name":"Word error rate","level":2,"score":0.6004354953765869},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5843932628631592},{"id":"https://openalex.org/C68693459","wikidata":"https://www.wikidata.org/wiki/Q657586","display_name":"Hyperplane","level":2,"score":0.5832138061523438},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5679765939712524},{"id":"https://openalex.org/C52620605","wikidata":"https://www.wikidata.org/wiki/Q7268357","display_name":"Quadratic classifier","level":3,"score":0.5527921915054321},{"id":"https://openalex.org/C139532973","wikidata":"https://www.wikidata.org/wiki/Q2679259","display_name":"Linear classifier","level":3,"score":0.5488128066062927},{"id":"https://openalex.org/C104317236","wikidata":"https://www.wikidata.org/wiki/Q4330126","display_name":"Classification rule","level":2,"score":0.5482327938079834},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.4696618318557739},{"id":"https://openalex.org/C173102733","wikidata":"https://www.wikidata.org/wiki/Q6760396","display_name":"Margin classifier","level":3,"score":0.4475755989551544},{"id":"https://openalex.org/C83665646","wikidata":"https://www.wikidata.org/wiki/Q42139305","display_name":"Feature vector","level":2,"score":0.4451752305030823},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.42454826831817627},{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.41043293476104736},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.23198240995407104},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016477","descriptor_name":"Artifacts","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016477","descriptor_name":"Artifacts","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016477","descriptor_name":"Artifacts","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btn349","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn349","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/24/17/1889/49051334/bioinformatics_24_17_1889.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:18621758","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18621758","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btn349","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn349","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/24/17/1889/49051334/bioinformatics_24_17_1889.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320317673","display_name":"Translational Genomics Research Institute","ror":"https://ror.org/02hfpnk21"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2116012423.pdf","grobid_xml":"https://content.openalex.org/works/W2116012423.grobid-xml"},"referenced_works_count":13,"referenced_works":["https://openalex.org/W1547663564","https://openalex.org/W1727290854","https://openalex.org/W1966701961","https://openalex.org/W1972909920","https://openalex.org/W1978318335","https://openalex.org/W1981721425","https://openalex.org/W2087684630","https://openalex.org/W2097413644","https://openalex.org/W2108728387","https://openalex.org/W2118377301","https://openalex.org/W2136487516","https://openalex.org/W2155802323","https://openalex.org/W2160450758"],"related_works":["https://openalex.org/W2043589769","https://openalex.org/W2348284307","https://openalex.org/W2187500075","https://openalex.org/W2055840562","https://openalex.org/W1964761968","https://openalex.org/W2362981726","https://openalex.org/W2387926453","https://openalex.org/W2351517209","https://openalex.org/W2143407407","https://openalex.org/W2116012423"],"abstract_inverted_index":{"Companion":[0],"Website.":[1],"http://gsp.tamu.edu/Publications/rejectoption/":[2]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":8},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":3}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
