{"id":"https://openalex.org/W2170604299","doi":"https://doi.org/10.1093/bioinformatics/btn259","title":"DNAlive: a tool for the physical analysis of DNA at the genomic scale","display_name":"DNAlive: a tool for the physical analysis of DNA at the genomic scale","publication_year":2008,"publication_date":"2008-06-09","ids":{"openalex":"https://openalex.org/W2170604299","doi":"https://doi.org/10.1093/bioinformatics/btn259","mag":"2170604299","pmid":"https://pubmed.ncbi.nlm.nih.gov/18544548"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btn259","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn259","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/24/15/1731/16881977/btn259.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/24/15/1731/16881977/btn259.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5049534268","display_name":"J. Goni","orcid":null},"institutions":[{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]},{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I11932220","display_name":"Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats","ror":"https://ror.org/0371hy230","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I11932220"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"J. Ramon Go\u00f1i","raw_affiliation_strings":["1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Parc Cient\u00edfic de Barcelona, Josep Samitier 1-5, Barcelona 08028, 2Barcelona Supercomputing Center, Jordi Girona 31, Barcelona 08034, 3National Institute of Bioinformatics, Parc Cient\u00edfic de Barcelona, Josep Samitier 1-5, 4Departament de Bioqu\u00edmica, Facultat de Biolog\u00eda, Avgda Diagonal 647, Barcelona 08028 and 5Institut Catal\u00e0 per la Recerca i Estudis Avan\u00e7ats (ICREA), Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Parc Cient\u00edfic de Barcelona, Josep Samitier 1-5, Barcelona 08028, 2Barcelona Supercomputing Center, Jordi Girona 31, Barcelona 08034, 3National Institute of Bioinformatics, Parc Cient\u00edfic de Barcelona, Josep Samitier 1-5, 4Departament de Bioqu\u00edmica, Facultat de Biolog\u00eda, Avgda Diagonal 647, Barcelona 08028 and 5Institut Catal\u00e0 per la Recerca i Estudis Avan\u00e7ats (ICREA), Barcelona, Spain","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I11932220","https://openalex.org/I2799803557"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049822135","display_name":"Carlos Fenollosa","orcid":null},"institutions":[{"id":"https://openalex.org/I11932220","display_name":"Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats","ror":"https://ror.org/0371hy230","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I11932220"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]},{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Carlos Fenollosa","raw_affiliation_strings":["1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Parc Cient\u00edfic de Barcelona, Josep Samitier 1-5, Barcelona 08028, 2Barcelona Supercomputing Center, Jordi Girona 31, Barcelona 08034, 3National Institute of Bioinformatics, Parc Cient\u00edfic de Barcelona, Josep Samitier 1-5, 4Departament de Bioqu\u00edmica, Facultat de Biolog\u00eda, Avgda Diagonal 647, Barcelona 08028 and 5Institut Catal\u00e0 per la Recerca i Estudis Avan\u00e7ats (ICREA), Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Parc Cient\u00edfic de Barcelona, Josep Samitier 1-5, Barcelona 08028, 2Barcelona Supercomputing Center, Jordi Girona 31, Barcelona 08034, 3National Institute of Bioinformatics, Parc Cient\u00edfic de Barcelona, Josep Samitier 1-5, 4Departament de Bioqu\u00edmica, Facultat de Biolog\u00eda, Avgda Diagonal 647, Barcelona 08028 and 5Institut Catal\u00e0 per la Recerca i Estudis Avan\u00e7ats (ICREA), Barcelona, Spain","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I11932220","https://openalex.org/I2799803557"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063704705","display_name":"Alberto P\u00e9rez","orcid":"https://orcid.org/0000-0002-5054-5338"},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]},{"id":"https://openalex.org/I11932220","display_name":"Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats","ror":"https://ror.org/0371hy230","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I11932220"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Alberto P\u00e9rez","raw_affiliation_strings":["1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Parc Cient\u00edfic de Barcelona, Josep Samitier 1-5, Barcelona 08028, 2Barcelona Supercomputing Center, Jordi Girona 31, Barcelona 08034, 3National Institute of Bioinformatics, Parc Cient\u00edfic de Barcelona, Josep Samitier 1-5, 4Departament de Bioqu\u00edmica, Facultat de Biolog\u00eda, Avgda Diagonal 647, Barcelona 08028 and 5Institut Catal\u00e0 per la Recerca i Estudis Avan\u00e7ats (ICREA), Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Parc Cient\u00edfic de Barcelona, Josep Samitier 1-5, Barcelona 08028, 2Barcelona Supercomputing Center, Jordi Girona 31, Barcelona 08034, 3National Institute of Bioinformatics, Parc Cient\u00edfic de Barcelona, Josep Samitier 1-5, 4Departament de Bioqu\u00edmica, Facultat de Biolog\u00eda, Avgda Diagonal 647, Barcelona 08028 and 5Institut Catal\u00e0 per la Recerca i Estudis Avan\u00e7ats (ICREA), Barcelona, Spain","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I11932220","https://openalex.org/I2799803557"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086109236","display_name":"David Torrents","orcid":"https://orcid.org/0000-0002-6086-9037"},"institutions":[{"id":"https://openalex.org/I11932220","display_name":"Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats","ror":"https://ror.org/0371hy230","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I11932220"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]},{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"David Torrents","raw_affiliation_strings":["1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Parc Cient\u00edfic de Barcelona, Josep Samitier 1-5, Barcelona 08028, 2Barcelona Supercomputing Center, Jordi Girona 31, Barcelona 08034, 3National Institute of Bioinformatics, Parc Cient\u00edfic de Barcelona, Josep Samitier 1-5, 4Departament de Bioqu\u00edmica, Facultat de Biolog\u00eda, Avgda Diagonal 647, Barcelona 08028 and 5Institut Catal\u00e0 per la Recerca i Estudis Avan\u00e7ats (ICREA), Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Parc Cient\u00edfic de Barcelona, Josep Samitier 1-5, Barcelona 08028, 2Barcelona Supercomputing Center, Jordi Girona 31, Barcelona 08034, 3National Institute of Bioinformatics, Parc Cient\u00edfic de Barcelona, Josep Samitier 1-5, 4Departament de Bioqu\u00edmica, Facultat de Biolog\u00eda, Avgda Diagonal 647, Barcelona 08028 and 5Institut Catal\u00e0 per la Recerca i Estudis Avan\u00e7ats (ICREA), Barcelona, Spain","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I11932220","https://openalex.org/I2799803557"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006399866","display_name":"Modesto Orozco","orcid":"https://orcid.org/0000-0002-8608-3278"},"institutions":[{"id":"https://openalex.org/I11932220","display_name":"Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats","ror":"https://ror.org/0371hy230","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I11932220"]},{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Modesto Orozco","raw_affiliation_strings":["1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Parc Cient\u00edfic de Barcelona, Josep Samitier 1-5, Barcelona 08028, 2Barcelona Supercomputing Center, Jordi Girona 31, Barcelona 08034, 3National Institute of Bioinformatics, Parc Cient\u00edfic de Barcelona, Josep Samitier 1-5, 4Departament de Bioqu\u00edmica, Facultat de Biolog\u00eda, Avgda Diagonal 647, Barcelona 08028 and 5Institut Catal\u00e0 per la Recerca i Estudis Avan\u00e7ats (ICREA), Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"1 Joint IRB-BSC Program on Computational Biology, Institute of Research in Biomedicine, Parc Cient\u00edfic de Barcelona, Josep Samitier 1-5, Barcelona 08028, 2Barcelona Supercomputing Center, Jordi Girona 31, Barcelona 08034, 3National Institute of Bioinformatics, Parc Cient\u00edfic de Barcelona, Josep Samitier 1-5, 4Departament de Bioqu\u00edmica, Facultat de Biolog\u00eda, Avgda Diagonal 647, Barcelona 08028 and 5Institut Catal\u00e0 per la Recerca i Estudis Avan\u00e7ats (ICREA), Barcelona, Spain","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I11932220","https://openalex.org/I2799803557"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5006399866"],"corresponding_institution_ids":["https://openalex.org/I11932220","https://openalex.org/I2799803557","https://openalex.org/I9617848"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.808,"has_fulltext":false,"cited_by_count":31,"citation_normalized_percentile":{"value":0.72510327,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"24","issue":"15","first_page":"1731","last_page":"1732"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6693267822265625},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5933209657669067},{"id":"https://openalex.org/keywords/graphical-user-interface","display_name":"Graphical user interface","score":0.5211936831474304},{"id":"https://openalex.org/keywords/chromatin","display_name":"Chromatin","score":0.4781035780906677},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.4285299777984619},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.42048153281211853},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4090525209903717},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.23987135291099548},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.19615709781646729},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.18120700120925903}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6693267822265625},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5933209657669067},{"id":"https://openalex.org/C37789001","wikidata":"https://www.wikidata.org/wiki/Q782543","display_name":"Graphical user interface","level":2,"score":0.5211936831474304},{"id":"https://openalex.org/C83640560","wikidata":"https://www.wikidata.org/wiki/Q180951","display_name":"Chromatin","level":3,"score":0.4781035780906677},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.4285299777984619},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.42048153281211853},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4090525209903717},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23987135291099548},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.19615709781646729},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.18120700120925903},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btn259","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn259","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/24/15/1731/16881977/btn259.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:18544548","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18544548","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btn259","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn259","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/24/15/1731/16881977/btn259.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320323816","display_name":"Fundaci\u00f3n Bot\u00edn","ror":"https://ror.org/03zefme93"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2170604299.pdf","grobid_xml":"https://content.openalex.org/works/W2170604299.grobid-xml"},"referenced_works_count":11,"referenced_works":["https://openalex.org/W1971268821","https://openalex.org/W1980722147","https://openalex.org/W2002844930","https://openalex.org/W2109745159","https://openalex.org/W2111400482","https://openalex.org/W2136145671","https://openalex.org/W2136729627","https://openalex.org/W2139516179","https://openalex.org/W2146135000","https://openalex.org/W4293196852","https://openalex.org/W6842402754"],"related_works":["https://openalex.org/W2152861454","https://openalex.org/W3004891660","https://openalex.org/W4286930115","https://openalex.org/W1842891956","https://openalex.org/W2969540308","https://openalex.org/W2414971881","https://openalex.org/W4225831698","https://openalex.org/W3198436517","https://openalex.org/W1607718650","https://openalex.org/W2624709009"],"abstract_inverted_index":{"http://mmb.pcb.ub.es/DNAlive/":[0],";":[1],"http://www.inab.org/":[2]},"counts_by_year":[{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":3}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
