{"id":"https://openalex.org/W2127008962","doi":"https://doi.org/10.1093/bioinformatics/btn183","title":"Integrating high dimensional bi-directional parsing models for gene mention tagging","display_name":"Integrating high dimensional bi-directional parsing models for gene mention tagging","publication_year":2008,"publication_date":"2008-06-27","ids":{"openalex":"https://openalex.org/W2127008962","doi":"https://doi.org/10.1093/bioinformatics/btn183","mag":"2127008962","pmid":"https://pubmed.ncbi.nlm.nih.gov/18586726"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btn183","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn183","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/24/13/i286/646325/btn183.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/24/13/i286/646325/btn183.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5040580626","display_name":"Chun\u2010Nan Hsu","orcid":"https://orcid.org/0000-0002-5240-4707"},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]},{"id":"https://openalex.org/I4210098366","display_name":"Institute of Information Science, Academia Sinica","ror":"https://ror.org/00z83z196","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210098366","https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Chun-Nan Hsu","raw_affiliation_strings":["1 Institute of Information Science, Academia Sinica and 2Institute of Biomedical Informatics, National Yang-Ming University, Taipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Institute of Information Science, Academia Sinica and 2Institute of Biomedical Informatics, National Yang-Ming University, Taipei, Taiwan","institution_ids":["https://openalex.org/I148366613","https://openalex.org/I4210098366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104172512","display_name":"Yu-Ming Chang","orcid":null},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]},{"id":"https://openalex.org/I4210098366","display_name":"Institute of Information Science, Academia Sinica","ror":"https://ror.org/00z83z196","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210098366","https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yu-Ming Chang","raw_affiliation_strings":["1 Institute of Information Science, Academia Sinica and 2Institute of Biomedical Informatics, National Yang-Ming University, Taipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Institute of Information Science, Academia Sinica and 2Institute of Biomedical Informatics, National Yang-Ming University, Taipei, Taiwan","institution_ids":["https://openalex.org/I148366613","https://openalex.org/I4210098366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031768968","display_name":"Cheng-Ju Kuo","orcid":"https://orcid.org/0000-0001-9664-4959"},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]},{"id":"https://openalex.org/I4210098366","display_name":"Institute of Information Science, Academia Sinica","ror":"https://ror.org/00z83z196","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210098366","https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Cheng-Ju Kuo","raw_affiliation_strings":["1 Institute of Information Science, Academia Sinica and 2Institute of Biomedical Informatics, National Yang-Ming University, Taipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Institute of Information Science, Academia Sinica and 2Institute of Biomedical Informatics, National Yang-Ming University, Taipei, Taiwan","institution_ids":["https://openalex.org/I148366613","https://openalex.org/I4210098366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102047739","display_name":"Yu-Shi Lin","orcid":null},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]},{"id":"https://openalex.org/I4210098366","display_name":"Institute of Information Science, Academia Sinica","ror":"https://ror.org/00z83z196","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210098366","https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yu-Shi Lin","raw_affiliation_strings":["1 Institute of Information Science, Academia Sinica and 2Institute of Biomedical Informatics, National Yang-Ming University, Taipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Institute of Information Science, Academia Sinica and 2Institute of Biomedical Informatics, National Yang-Ming University, Taipei, Taiwan","institution_ids":["https://openalex.org/I148366613","https://openalex.org/I4210098366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027210768","display_name":"Han-Shen Huang","orcid":null},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]},{"id":"https://openalex.org/I4210098366","display_name":"Institute of Information Science, Academia Sinica","ror":"https://ror.org/00z83z196","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210098366","https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Han-Shen Huang","raw_affiliation_strings":["1 Institute of Information Science, Academia Sinica and 2Institute of Biomedical Informatics, National Yang-Ming University, Taipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Institute of Information Science, Academia Sinica and 2Institute of Biomedical Informatics, National Yang-Ming University, Taipei, Taiwan","institution_ids":["https://openalex.org/I148366613","https://openalex.org/I4210098366"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5021101384","display_name":"I\u2010Fang Chung","orcid":"https://orcid.org/0000-0001-7892-7285"},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]},{"id":"https://openalex.org/I4210098366","display_name":"Institute of Information Science, Academia Sinica","ror":"https://ror.org/00z83z196","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210098366","https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"I-Fang Chung","raw_affiliation_strings":["1 Institute of Information Science, Academia Sinica and 2Institute of Biomedical Informatics, National Yang-Ming University, Taipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 Institute of Information Science, Academia Sinica and 2Institute of Biomedical Informatics, National Yang-Ming University, Taipei, Taiwan","institution_ids":["https://openalex.org/I148366613","https://openalex.org/I4210098366"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5040580626"],"corresponding_institution_ids":["https://openalex.org/I148366613","https://openalex.org/I4210098366"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":3.0881,"has_fulltext":true,"cited_by_count":79,"citation_normalized_percentile":{"value":0.91887125,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"24","issue":"13","first_page":"i286","last_page":"i294"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9817000031471252,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9817000031471252,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.002899999963119626,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.002899999963119626,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/parsing","display_name":"Parsing","score":0.8445701003074646},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.726356029510498},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4264344871044159},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4077603220939636},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.39860212802886963},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2626532316207886}],"concepts":[{"id":"https://openalex.org/C186644900","wikidata":"https://www.wikidata.org/wiki/Q194152","display_name":"Parsing","level":2,"score":0.8445701003074646},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.726356029510498},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4264344871044159},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4077603220939636},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.39860212802886963},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2626532316207886}],"mesh":[{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005819","descriptor_name":"Genetic Markers","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005819","descriptor_name":"Genetic Markers","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005819","descriptor_name":"Genetic Markers","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btn183","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn183","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/24/13/i286/646325/btn183.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:18586726","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18586726","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.323.9140","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.323.9140","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://aiia.iis.sinica.edu.tw/index.php?Itemid%3D41%26gid%3D19%26option%3Dcom_docman%26task%3Ddoc_download","raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:2718659","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2718659","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btn183","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn183","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/24/13/i286/646325/btn183.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G7996248560","display_name":null,"funder_award_id":"NSC95","funder_id":"https://openalex.org/F4320321040","funder_display_name":"National Science Council"}],"funders":[{"id":"https://openalex.org/F4320321040","display_name":"National Science Council","ror":"https://ror.org/02kv4zf79"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2127008962.pdf","grobid_xml":"https://content.openalex.org/works/W2127008962.grobid-xml"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W118065779","https://openalex.org/W182104056","https://openalex.org/W192665053","https://openalex.org/W1988995507","https://openalex.org/W2001792610","https://openalex.org/W2048679005","https://openalex.org/W2068556706","https://openalex.org/W2117479478","https://openalex.org/W2124767974","https://openalex.org/W2135912801","https://openalex.org/W2147880316","https://openalex.org/W2151296343","https://openalex.org/W2156515921","https://openalex.org/W2161905890","https://openalex.org/W2169392521","https://openalex.org/W3029645440","https://openalex.org/W3082731548","https://openalex.org/W4293775970","https://openalex.org/W4300022934","https://openalex.org/W6604760373","https://openalex.org/W6662528715","https://openalex.org/W6682082992","https://openalex.org/W6782176686"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W2478288626","https://openalex.org/W4381248170","https://openalex.org/W3189621521","https://openalex.org/W3204019825"],"abstract_inverted_index":{"MOTIVATION:":[0],"Tagging":[1],"gene":[2,4,26,59,300,313],"and":[3,34,79,145,149,158,199,222,273,307],"product":[5],"mentions":[6],"in":[7,23,30,63,105,229],"scientific":[8],"text":[9],"is":[10,44,68,176,197],"an":[11,180,308],"important":[12],"initial":[13],"step":[14],"of":[15,124,139,162,173,179,189,256,311],"literature":[16],"mining.":[17],"In":[18],"this":[19,285],"article,":[20],"we":[21,84,108,261],"describe":[22,104],"detail":[24,106],"our":[25,86,99,110,174,227,312],"mention":[27,60,301,314],"tagger":[28,43,67,175,228,315],"participated":[29],"BioCreative":[31,64,230],"2":[32,231],"challenge":[33],"analyze":[35],"what":[36],"contributes":[37,168],"to":[38,97,169,212,267],"its":[39],"good":[40,171],"performance.":[41],"Our":[42,66],"based":[45,153,276,294],"on":[46,154,277,295],"the":[47,53,58,73,136,146,155,163,170,177,187,205,223,254,278,296],"conditional":[48],"random":[49],"fields":[50],"model":[51,196,218,287],"(CRF),":[52],"most":[54,123,164],"prevailing":[55],"method":[56],"for":[57,226,299],"tagging":[61],"task":[62],"2.":[65],"interesting":[69],"because":[70],"it":[71,95,191],"accomplished":[72],"highest":[74],"F-scores":[75],"among":[76],"CRF-based":[77,111],"methods":[78],"second":[80],"over":[81,247],"all.":[82],"Moreover,":[83],"obtained":[85],"results":[87,236,282],"by":[88],"mostly":[89],"applying":[90],"open":[91],"source":[92],"packages,":[93],"making":[94],"easy":[96],"duplicate":[98],"results.":[100,207],"RESULTS:":[101],"We":[102,113,130,208],"first":[103],"how":[107],"developed":[109],"tagger.":[112],"designed":[114],"a":[115,194,216],"very":[116],"high":[117],"dimensional":[118],"feature":[119,214,224,265],"set":[120,138],"that":[121,126,167,193,210,284],"includes":[122],"information":[125],"may":[127],"be":[128,220,317],"relevant.":[129],"trained":[131],"bi-directional":[132,200,258,270],"CRF":[133,195,217],"models":[134,152,202,242,272],"with":[135],"same":[137,206],"features,":[140],"one":[141],"applies":[142],"forward":[143,248],"parsing":[144,183,201,241,249,259,271],"other":[147],"backward,":[148],"integrated":[150,286],"two":[151],"output":[156,279],"scores":[157],"dictionary":[159],"filtering.":[160],"One":[161],"prominent":[165],"factors":[166],"performance":[172],"integration":[178],"additional":[181],"backward":[182,240],"model.":[184,250],"However,":[185],"from":[186],"definition":[188],"CRF,":[190],"appears":[192],"symmetric":[198],"will":[203],"produce":[204],"show":[209,283],"due":[211],"different":[213,235,263],"settings,":[215],"can":[219,288,316],"asymmetric":[221,264],"setting":[225],"not":[232],"only":[233],"produces":[234],"but":[237,244],"also":[238],"gives":[239],"slight":[243],"constant":[245],"advantage":[246],"To":[251],"fully":[252],"explore":[253],"potential":[255],"integrating":[257],"models,":[260],"applied":[262],"settings":[266],"generate":[268],"many":[269],"integrate":[274],"them":[275],"scores.":[280],"Experimental":[281],"achieve":[289],"even":[290],"higher":[291],"F-score":[292],"solely":[293],"training":[297],"corpus":[298],"tagging.":[302],"AVAILABILITY:":[303],"Data":[304],"sets,":[305],"programs":[306],"on-line":[309],"service":[310],"accessed":[318],"at":[319],"http://aiia.iis.sinica.edu.tw/biocreative2.htm.":[320]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":9},{"year":2016,"cited_by_count":9},{"year":2015,"cited_by_count":12},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":9},{"year":2012,"cited_by_count":8}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
