{"id":"https://openalex.org/W2158568548","doi":"https://doi.org/10.1093/bioinformatics/btn156","title":"The EXACT description of biomedical protocols","display_name":"The EXACT description of biomedical protocols","publication_year":2008,"publication_date":"2008-06-27","ids":{"openalex":"https://openalex.org/W2158568548","doi":"https://doi.org/10.1093/bioinformatics/btn156","mag":"2158568548","pmid":"https://pubmed.ncbi.nlm.nih.gov/18586727"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btn156","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn156","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/24/13/i295/49053228/bioinformatics_24_13_i295.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/24/13/i295/49053228/bioinformatics_24_13_i295.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022052915","display_name":"Larisa Soldatova","orcid":"https://orcid.org/0000-0001-6489-3029"},"institutions":[{"id":"https://openalex.org/I16038530","display_name":"Aberystwyth University","ror":"https://ror.org/015m2p889","country_code":"GB","type":"education","lineage":["https://openalex.org/I16038530"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Larisa N. Soldatova","raw_affiliation_strings":["Department of Computer Science, Aberystwyth University, Penglais, Aberystwyth, SY23 3DB, Wales, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Aberystwyth University, Penglais, Aberystwyth, SY23 3DB, Wales, UK","institution_ids":["https://openalex.org/I16038530"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052838707","display_name":"Wayne Aubrey","orcid":"https://orcid.org/0000-0003-3351-1758"},"institutions":[{"id":"https://openalex.org/I16038530","display_name":"Aberystwyth University","ror":"https://ror.org/015m2p889","country_code":"GB","type":"education","lineage":["https://openalex.org/I16038530"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Wayne Aubrey","raw_affiliation_strings":["Department of Computer Science, Aberystwyth University, Penglais, Aberystwyth, SY23 3DB, Wales, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Aberystwyth University, Penglais, Aberystwyth, SY23 3DB, Wales, UK","institution_ids":["https://openalex.org/I16038530"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020822487","display_name":"Ross D. King","orcid":"https://orcid.org/0000-0001-7208-4387"},"institutions":[{"id":"https://openalex.org/I16038530","display_name":"Aberystwyth University","ror":"https://ror.org/015m2p889","country_code":"GB","type":"education","lineage":["https://openalex.org/I16038530"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Ross D. King","raw_affiliation_strings":["Department of Computer Science, Aberystwyth University, Penglais, Aberystwyth, SY23 3DB, Wales, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Aberystwyth University, Penglais, Aberystwyth, SY23 3DB, Wales, UK","institution_ids":["https://openalex.org/I16038530"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5072262751","display_name":"Amanda Clare","orcid":"https://orcid.org/0000-0001-8315-3659"},"institutions":[{"id":"https://openalex.org/I16038530","display_name":"Aberystwyth University","ror":"https://ror.org/015m2p889","country_code":"GB","type":"education","lineage":["https://openalex.org/I16038530"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Amanda Clare","raw_affiliation_strings":["Department of Computer Science, Aberystwyth University, Penglais, Aberystwyth, SY23 3DB, Wales, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Aberystwyth University, Penglais, Aberystwyth, SY23 3DB, Wales, UK","institution_ids":["https://openalex.org/I16038530"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5022052915"],"corresponding_institution_ids":["https://openalex.org/I16038530"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":1.6844,"has_fulltext":true,"cited_by_count":50,"citation_normalized_percentile":{"value":0.83827459,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"24","issue":"13","first_page":"i295","last_page":"i303"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.8664000034332275,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.8664000034332275,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.0340999998152256,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.008100000210106373,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8342128396034241},{"id":"https://openalex.org/keywords/protocol","display_name":"Protocol (science)","score":0.6893787384033203},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.6830004453659058},{"id":"https://openalex.org/keywords/clarity","display_name":"CLARITY","score":0.6807668805122375},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.5177521109580994},{"id":"https://openalex.org/keywords/basis","display_name":"Basis (linear algebra)","score":0.4911462962627411},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.43046483397483826},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4043310284614563},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.35025209188461304},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.33173996210098267},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.32836687564849854},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.08228591084480286},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.07574543356895447},{"id":"https://openalex.org/keywords/epistemology","display_name":"Epistemology","score":0.06780412793159485}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8342128396034241},{"id":"https://openalex.org/C2780385302","wikidata":"https://www.wikidata.org/wiki/Q367158","display_name":"Protocol (science)","level":3,"score":0.6893787384033203},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.6830004453659058},{"id":"https://openalex.org/C2777146004","wikidata":"https://www.wikidata.org/wiki/Q14949826","display_name":"CLARITY","level":2,"score":0.6807668805122375},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.5177521109580994},{"id":"https://openalex.org/C12426560","wikidata":"https://www.wikidata.org/wiki/Q189569","display_name":"Basis (linear algebra)","level":2,"score":0.4911462962627411},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.43046483397483826},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4043310284614563},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.35025209188461304},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.33173996210098267},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.32836687564849854},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.08228591084480286},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.07574543356895447},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.06780412793159485},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C204787440","wikidata":"https://www.wikidata.org/wiki/Q188504","display_name":"Alternative medicine","level":2,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":7,"locations":[{"id":"doi:10.1093/bioinformatics/btn156","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn156","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/24/13/i295/49053228/bioinformatics_24_13_i295.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:18586727","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18586727","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pure.atira.dk:publications/57de4b0f-01b1-4ecb-9776-82c1a31ea1b9","is_oa":true,"landing_page_url":"https://research.manchester.ac.uk/en/publications/57de4b0f-01b1-4ecb-9776-82c1a31ea1b9","pdf_url":"https://pure.manchester.ac.uk/ws/files/26035961/POST-PEER-REVIEW-PUBLISHERS.PDF","source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Soldatova, L N, Aubrey, W, King, R D & Clare, A 2008, 'The EXACT description of biomedical protocols', Bioinformatics, vol. 24, no. 13, pp. 295-303. https://doi.org/10.1093/bioinformatics/btn156","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.690.74","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.690.74","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bura.brunel.ac.uk/bitstream/2438/8930/2/Fulltext.pdf","raw_type":"text"},{"id":"pmh:oai:bura.brunel.ac.uk:2438/8930","is_oa":true,"landing_page_url":"http://bioinformatics.oxfordjournals.org/content/24/13/i295","pdf_url":null,"source":{"id":"https://openalex.org/S4306401473","display_name":"Brunel University Research Archive (BURA) (Brunel University London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I59433898","host_organization_name":"Brunel University of London","host_organization_lineage":["https://openalex.org/I59433898"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2718634","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2718634","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:pure.atira.dk:publications/57de4b0f-01b1-4ecb-9776-82c1a31ea1b9","is_oa":false,"landing_page_url":"https://www.research.manchester.ac.uk/portal/en/publications/the-exact-description-of-biomedical-protocols(57de4b0f-01b1-4ecb-9776-82c1a31ea1b9).html","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btn156","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btn156","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/24/13/i295/49053228/bioinformatics_24_13_i295.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320334627","display_name":"Engineering and Physical Sciences Research Council","ror":"https://ror.org/0439y7842"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2158568548.pdf"},"referenced_works_count":38,"referenced_works":["https://openalex.org/W114624248","https://openalex.org/W1481333225","https://openalex.org/W1526043578","https://openalex.org/W1544923801","https://openalex.org/W1555643513","https://openalex.org/W1559958463","https://openalex.org/W1600651336","https://openalex.org/W1601258312","https://openalex.org/W1856759053","https://openalex.org/W1940888119","https://openalex.org/W1972478730","https://openalex.org/W1994100378","https://openalex.org/W2005718191","https://openalex.org/W2034854788","https://openalex.org/W2041746508","https://openalex.org/W2050355460","https://openalex.org/W2057761395","https://openalex.org/W2068768700","https://openalex.org/W2103260426","https://openalex.org/W2113153354","https://openalex.org/W2128396257","https://openalex.org/W2133881934","https://openalex.org/W2134228617","https://openalex.org/W2136636278","https://openalex.org/W2137865376","https://openalex.org/W2144303444","https://openalex.org/W2146871965","https://openalex.org/W2148824896","https://openalex.org/W2163670493","https://openalex.org/W2589217375","https://openalex.org/W3144368627","https://openalex.org/W4238722302","https://openalex.org/W6628896968","https://openalex.org/W6638980456","https://openalex.org/W6640387716","https://openalex.org/W6658807527","https://openalex.org/W6675717626","https://openalex.org/W6679509283"],"related_works":["https://openalex.org/W2086338133","https://openalex.org/W4367679314","https://openalex.org/W225526533","https://openalex.org/W2078361494","https://openalex.org/W2009234990","https://openalex.org/W2148273157","https://openalex.org/W4244083766","https://openalex.org/W2091016074","https://openalex.org/W2023583523","https://openalex.org/W2134615400"],"abstract_inverted_index":{"MOTIVATION:":[0],"Many":[1],"published":[2,19],"manuscripts":[3],"contain":[4],"experiment":[5,49],"protocols":[6,50,80,111],"which":[7],"are":[8,21],"poorly":[9],"described":[10],"or":[11,24],"deficient":[12],"in":[13,51,107],"information.":[14],"This":[15,28],"means":[16],"that":[17,81,100],"the":[18,35,61,67,89,101,108,118],"results":[20],"very":[22],"hard":[23],"impossible":[25],"to":[26,47,117],"repeat.":[27],"problem":[29],"is":[30,42],"being":[31],"made":[32],"worse":[33],"by":[34,94],"increasing":[36],"complexity":[37],"of":[38,69,72,103,110],"high-throughput/automated":[39],"methods.":[40],"There":[41],"therefore":[43],"a":[44,70],"growing":[45],"need":[46],"represent":[48],"an":[52],"efficient":[53],"and":[54,87,91,115,125],"unambiguous":[55],"way.":[56],"RESULTS:":[57],"We":[58,77,98],"have":[59,82],"developed":[60],"Experiment":[62],"ACTions":[63],"(EXACT)":[64],"ontology":[65],"as":[66],"basis":[68],"method":[71],"representing":[73],"biological":[74],"laboratory":[75],"protocols.":[76],"provide":[78],"example":[79],"been":[83],"formalized":[84],"using":[85,95],"EXACT,":[86],"demonstrate":[88],"advantages":[90],"opportunities":[92],"created":[93],"this":[96],"formalization.":[97],"argue":[99],"use":[102],"EXACT":[104],"will":[105],"result":[106],"publication":[109],"with":[112],"increased":[113],"clarity":[114],"usefulness":[116],"scientific":[119],"community.":[120],"AVAILABILITY:":[121],"The":[122],"ontology,":[123],"examples":[124],"code":[126],"can":[127],"be":[128],"downloaded":[129],"from":[130],"http://www.aber.ac.uk/compsci/Research/bio/dss/EXACT/.":[131]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":9},{"year":2017,"cited_by_count":6},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":3}],"updated_date":"2026-05-22T06:13:13.366637","created_date":"2025-10-10T00:00:00"}
