{"id":"https://openalex.org/W18344517","doi":"https://doi.org/10.1093/bioinformatics/btn090","title":"GlycoBase and autoGU: tools for HPLC-based glycan analysis.","display_name":"GlycoBase and autoGU: tools for HPLC-based glycan analysis.","publication_year":2008,"publication_date":"2008-05-01","ids":{"openalex":"https://openalex.org/W18344517","doi":"https://doi.org/10.1093/bioinformatics/btn090","mag":"18344517","pmid":"https://pubmed.ncbi.nlm.nih.gov/18344517"},"language":"en","primary_location":{"id":"pmid:18344517","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18344517","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":"Journal Article"},"type":"article","indexed_in":["pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Matthew P Campbell","orcid":null},"institutions":[{"id":"https://openalex.org/I4210146410","display_name":"Science Oxford","ror":"https://ror.org/04j8yhy50","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I4210146410"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Matthew P Campbell","raw_affiliation_strings":["Oxford Glycobiology Institute, Department of Biochemistry, University of Oxford, South Parks Road, Oxford OX1 3QU, UK. matthew.campbell@nibrt.ie"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Oxford Glycobiology Institute, Department of Biochemistry, University of Oxford, South Parks Road, Oxford OX1 3QU, UK. matthew.campbell@nibrt.ie","institution_ids":["https://openalex.org/I4210146410"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Louise Royle","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Louise Royle","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":null,"display_name":"Catherine M Radcliffe","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Catherine M Radcliffe","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":null,"display_name":"Raymond A Dwek","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Raymond A Dwek","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":null,"display_name":"Pauline M Rudd","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Pauline M Rudd","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I4210146410"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.00993964,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"24","issue":"9","first_page":"1214","last_page":"6"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11857","display_name":"Archaeological and Historical Studies","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1204","display_name":"Archeology"},"field":{"id":"https://openalex.org/fields/12","display_name":"Arts and Humanities"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11857","display_name":"Archaeological and Historical Studies","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1204","display_name":"Archeology"},"field":{"id":"https://openalex.org/fields/12","display_name":"Arts and Humanities"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T13068","display_name":"Ancient Mediterranean Archaeology and History","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/1204","display_name":"Archeology"},"field":{"id":"https://openalex.org/fields/12","display_name":"Arts and Humanities"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T13714","display_name":"Medieval Architecture and Archaeology","score":0.9872999787330627,"subfield":{"id":"https://openalex.org/subfields/1204","display_name":"Archeology"},"field":{"id":"https://openalex.org/fields/12","display_name":"Arts and Humanities"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/economics","display_name":"Economics","score":0.2729170322418213}],"concepts":[{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.2729170322418213}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002851","descriptor_name":"Chromatography, High Pressure Liquid","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002851","descriptor_name":"Chromatography, High Pressure Liquid","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002851","descriptor_name":"Chromatography, High Pressure Liquid","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011134","descriptor_name":"Polysaccharides","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D011134","descriptor_name":"Polysaccharides","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D011134","descriptor_name":"Polysaccharides","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D011134","descriptor_name":"Polysaccharides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011134","descriptor_name":"Polysaccharides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011134","descriptor_name":"Polysaccharides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"pmid:18344517","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18344517","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":"Journal Article"},{"id":"mag:18344517","is_oa":false,"landing_page_url":"https://dialnet.unirioja.es/servlet/articulo?codigo=1023950","pdf_url":null,"source":{"id":"https://openalex.org/S4306401293","display_name":"Dialnet (Universidad de la Rioja)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I3032752892","host_organization_name":"Universidad Internacional de La Rioja","host_organization_lineage":["https://openalex.org/I3032752892"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320311904","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"SUMMARY:":[0],"The":[1],"development":[2],"of":[3,18,40,65,112,115],"robust":[4],"high-performance":[5],"liquid":[6],"chromatography":[7],"(HPLC)":[8],"technologies":[9],"continues":[10],"to":[11,34,72],"improve":[12],"the":[13,36,50,92,108],"detailed":[14],"analysis":[15,111],"and":[16,30,38,101],"sequencing":[17],"glycan":[19],"structures":[20,60,71],"released":[21,117],"from":[22,118],"glycoproteins.":[23,119],"Here,":[24],"we":[25],"present":[26],"a":[27,45],"database":[28,47],"(GlycoBase)":[29],"analytical":[31],"tool":[32],"(autoGU)":[33],"assist":[35],"interpretation":[37],"assignment":[39],"HPLC-glycan":[41],"profiles.":[42],"GlycoBase":[43],"is":[44],"relational":[46],"which":[48],"contains":[49],"HPLC":[51,75],"elution":[52],"positions":[53],"for":[54],"over":[55],"350":[56],"2-AB":[57],"labelled":[58],"N-glycan":[59],"together":[61],"with":[62,82],"predicted":[63],"products":[64],"exoglycosidase":[66,83],"digestions.":[67],"AutoGU":[68],"assigns":[69,86],"provisional":[70],"each":[73,87],"integrated":[74],"peak":[76],"and,":[77],"when":[78],"used":[79],"in":[80],"combination":[81],"digestions,":[84],"progressively":[85],"structure":[88],"automatically":[89],"based":[90],"on":[91],"footprint":[93],"data.":[94],"These":[95],"tools":[96],"are":[97],"potentially":[98],"very":[99],"promising":[100],"facilitate":[102],"basic":[103],"research":[104],"as":[105,107],"well":[106],"quantitative":[109],"high-throughput":[110],"low":[113],"concentrations":[114],"glycans":[116],"AVAILABILITY:":[120],"http://glycobase.ucd.ie":[121]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2015,"cited_by_count":1}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
