{"id":"https://openalex.org/W2154820180","doi":"https://doi.org/10.1093/bioinformatics/btm345","title":"Different packing of external residues can explain differences in the thermostability of proteins from thermophilic and mesophilic organisms","display_name":"Different packing of external residues can explain differences in the thermostability of proteins from thermophilic and mesophilic organisms","publication_year":2007,"publication_date":"2007-06-28","ids":{"openalex":"https://openalex.org/W2154820180","doi":"https://doi.org/10.1093/bioinformatics/btm345","mag":"2154820180","pmid":"https://pubmed.ncbi.nlm.nih.gov/17599925"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btm345","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btm345","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/23/17/2231/16860536/btm345.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/23/17/2231/16860536/btm345.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5057441595","display_name":"Anna V. Glyakina","orcid":null},"institutions":[{"id":"https://openalex.org/I4210137602","display_name":"Institute of Protein Research","ror":"https://ror.org/0489f0s93","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210129690","https://openalex.org/I4210137602"]},{"id":"https://openalex.org/I4210159227","display_name":"Institute of Mathematical Problems of Biology","ror":"https://ror.org/04xtpdj18","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210124601","https://openalex.org/I4210159227"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Anna V. Glyakina","raw_affiliation_strings":["1 Institute of Mathematical Problems of Biology and 2Institute of Protein Research, Russian Academy of Sciences, Pushchino, Moscow Region 142290, Russia"],"affiliations":[{"raw_affiliation_string":"1 Institute of Mathematical Problems of Biology and 2Institute of Protein Research, Russian Academy of Sciences, Pushchino, Moscow Region 142290, Russia","institution_ids":["https://openalex.org/I4210159227","https://openalex.org/I4210137602"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001775435","display_name":"Sergiy O. Garbuzynskiy","orcid":"https://orcid.org/0000-0001-6592-4528"},"institutions":[{"id":"https://openalex.org/I4210137602","display_name":"Institute of Protein Research","ror":"https://ror.org/0489f0s93","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210129690","https://openalex.org/I4210137602"]},{"id":"https://openalex.org/I4210159227","display_name":"Institute of Mathematical Problems of Biology","ror":"https://ror.org/04xtpdj18","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210124601","https://openalex.org/I4210159227"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Sergiy O. Garbuzynskiy","raw_affiliation_strings":["1 Institute of Mathematical Problems of Biology and 2Institute of Protein Research, Russian Academy of Sciences, Pushchino, Moscow Region 142290, Russia"],"affiliations":[{"raw_affiliation_string":"1 Institute of Mathematical Problems of Biology and 2Institute of Protein Research, Russian Academy of Sciences, Pushchino, Moscow Region 142290, Russia","institution_ids":["https://openalex.org/I4210159227","https://openalex.org/I4210137602"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112889029","display_name":"Michail Yu. Lobanov","orcid":null},"institutions":[{"id":"https://openalex.org/I4210159227","display_name":"Institute of Mathematical Problems of Biology","ror":"https://ror.org/04xtpdj18","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210124601","https://openalex.org/I4210159227"]},{"id":"https://openalex.org/I4210137602","display_name":"Institute of Protein Research","ror":"https://ror.org/0489f0s93","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210129690","https://openalex.org/I4210137602"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Michail Yu. Lobanov","raw_affiliation_strings":["1 Institute of Mathematical Problems of Biology and 2Institute of Protein Research, Russian Academy of Sciences, Pushchino, Moscow Region 142290, Russia"],"affiliations":[{"raw_affiliation_string":"1 Institute of Mathematical Problems of Biology and 2Institute of Protein Research, Russian Academy of Sciences, Pushchino, Moscow Region 142290, Russia","institution_ids":["https://openalex.org/I4210159227","https://openalex.org/I4210137602"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023828983","display_name":"Oxana V. Galzitskaya","orcid":"https://orcid.org/0000-0002-3962-1520"},"institutions":[{"id":"https://openalex.org/I4210159227","display_name":"Institute of Mathematical Problems of Biology","ror":"https://ror.org/04xtpdj18","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210124601","https://openalex.org/I4210159227"]},{"id":"https://openalex.org/I4210137602","display_name":"Institute of Protein Research","ror":"https://ror.org/0489f0s93","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210129690","https://openalex.org/I4210137602"]}],"countries":["RU"],"is_corresponding":true,"raw_author_name":"Oxana V. Galzitskaya","raw_affiliation_strings":["1 Institute of Mathematical Problems of Biology and 2Institute of Protein Research, Russian Academy of Sciences, Pushchino, Moscow Region 142290, Russia"],"affiliations":[{"raw_affiliation_string":"1 Institute of Mathematical Problems of Biology and 2Institute of Protein Research, Russian Academy of Sciences, Pushchino, Moscow Region 142290, Russia","institution_ids":["https://openalex.org/I4210159227","https://openalex.org/I4210137602"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5023828983"],"corresponding_institution_ids":["https://openalex.org/I4210137602","https://openalex.org/I4210159227"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":3.6304,"has_fulltext":true,"cited_by_count":92,"citation_normalized_percentile":{"value":0.93765117,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"23","issue":"17","first_page":"2231","last_page":"2238"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10407","display_name":"Lipid Membrane Structure and Behavior","score":0.992900013923645,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/thermostability","display_name":"Thermostability","score":0.9925175905227661},{"id":"https://openalex.org/keywords/thermophile","display_name":"Thermophile","score":0.8416059613227844},{"id":"https://openalex.org/keywords/mesophile","display_name":"Mesophile","score":0.8042068481445312},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.4565228819847107},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.29116034507751465},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.2505766451358795},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10082671046257019},{"id":"https://openalex.org/keywords/enzyme","display_name":"Enzyme","score":0.07821547985076904},{"id":"https://openalex.org/keywords/bacteria","display_name":"Bacteria","score":0.07641971111297607}],"concepts":[{"id":"https://openalex.org/C2781216036","wikidata":"https://www.wikidata.org/wiki/Q902494","display_name":"Thermostability","level":3,"score":0.9925175905227661},{"id":"https://openalex.org/C27911776","wikidata":"https://www.wikidata.org/wiki/Q834023","display_name":"Thermophile","level":3,"score":0.8416059613227844},{"id":"https://openalex.org/C63223902","wikidata":"https://www.wikidata.org/wiki/Q669652","display_name":"Mesophile","level":3,"score":0.8042068481445312},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.4565228819847107},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.29116034507751465},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.2505766451358795},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10082671046257019},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.07821547985076904},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.07641971111297607}],"mesh":[{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013696","descriptor_name":"Temperature","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013696","descriptor_name":"Temperature","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013696","descriptor_name":"Temperature","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017510","descriptor_name":"Protein Folding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017510","descriptor_name":"Protein Folding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017510","descriptor_name":"Protein Folding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btm345","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btm345","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/23/17/2231/16860536/btm345.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:17599925","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17599925","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btm345","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btm345","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/23/17/2231/16860536/btm345.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Clean water and sanitation","score":0.6600000262260437,"id":"https://metadata.un.org/sdg/6"}],"awards":[{"id":"https://openalex.org/G1643789071","display_name":null,"funder_award_id":"00000","funder_id":"https://openalex.org/F4320306082","funder_display_name":"Howard Hughes Medical Institute"}],"funders":[{"id":"https://openalex.org/F4320306082","display_name":"Howard Hughes Medical Institute","ror":"https://ror.org/006w34k90"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2154820180.pdf","grobid_xml":"https://content.openalex.org/works/W2154820180.grobid-xml"},"referenced_works_count":34,"referenced_works":["https://openalex.org/W1496368635","https://openalex.org/W1655990431","https://openalex.org/W1973706355","https://openalex.org/W1978129474","https://openalex.org/W1980022131","https://openalex.org/W1982304045","https://openalex.org/W1987268759","https://openalex.org/W1998041471","https://openalex.org/W1999479012","https://openalex.org/W2008708467","https://openalex.org/W2012182379","https://openalex.org/W2013888408","https://openalex.org/W2015265223","https://openalex.org/W2026343937","https://openalex.org/W2028093259","https://openalex.org/W2029871341","https://openalex.org/W2031102215","https://openalex.org/W2035467628","https://openalex.org/W2042764187","https://openalex.org/W2047166373","https://openalex.org/W2054525948","https://openalex.org/W2055043387","https://openalex.org/W2062535863","https://openalex.org/W2066332174","https://openalex.org/W2067411283","https://openalex.org/W2070783701","https://openalex.org/W2075104651","https://openalex.org/W2092485312","https://openalex.org/W2112032866","https://openalex.org/W2130479394","https://openalex.org/W2141179031","https://openalex.org/W2153195964","https://openalex.org/W2154665416","https://openalex.org/W2157938277"],"related_works":["https://openalex.org/W109238282","https://openalex.org/W2382137666","https://openalex.org/W2068147017","https://openalex.org/W2073544937","https://openalex.org/W2439525197","https://openalex.org/W2955670938","https://openalex.org/W111524047","https://openalex.org/W2123989420","https://openalex.org/W3046261807","https://openalex.org/W2058410375"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":12},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":3}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
