{"id":"https://openalex.org/W2168807719","doi":"https://doi.org/10.1093/bioinformatics/btm207","title":"From protein microarrays to diagnostic antigen discovery: a study of the pathogen <i>Francisella tularensis</i>","display_name":"From protein microarrays to diagnostic antigen discovery: a study of the pathogen <i>Francisella tularensis</i>","publication_year":2007,"publication_date":"2007-07-01","ids":{"openalex":"https://openalex.org/W2168807719","doi":"https://doi.org/10.1093/bioinformatics/btm207","mag":"2168807719","pmid":"https://pubmed.ncbi.nlm.nih.gov/17646338"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btm207","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btm207","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/23/13/i508/23706831/btm207.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/23/13/i508/23706831/btm207.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5113502097","display_name":"Suman Sundaresh","orcid":null},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"funder","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]},{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]},{"id":"https://openalex.org/I92446798","display_name":"Colorado State University","ror":"https://ror.org/03k1gpj17","country_code":"US","type":"education","lineage":["https://openalex.org/I92446798"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Suman Sundaresh","raw_affiliation_strings":["1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK","institution_ids":["https://openalex.org/I1289490764","https://openalex.org/I92446798","https://openalex.org/I204250578"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113274636","display_name":"Arlo Randall","orcid":null},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"funder","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]},{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]},{"id":"https://openalex.org/I92446798","display_name":"Colorado State University","ror":"https://ror.org/03k1gpj17","country_code":"US","type":"education","lineage":["https://openalex.org/I92446798"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Arlo Randall","raw_affiliation_strings":["1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK","institution_ids":["https://openalex.org/I1289490764","https://openalex.org/I92446798","https://openalex.org/I204250578"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039221007","display_name":"Berkay Unal","orcid":null},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"funder","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]},{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]},{"id":"https://openalex.org/I92446798","display_name":"Colorado State University","ror":"https://ror.org/03k1gpj17","country_code":"US","type":"education","lineage":["https://openalex.org/I92446798"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Berkay Unal","raw_affiliation_strings":["1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK","institution_ids":["https://openalex.org/I1289490764","https://openalex.org/I92446798","https://openalex.org/I204250578"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103572449","display_name":"Jeannine M. Petersen","orcid":null},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"funder","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]},{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]},{"id":"https://openalex.org/I92446798","display_name":"Colorado State University","ror":"https://ror.org/03k1gpj17","country_code":"US","type":"education","lineage":["https://openalex.org/I92446798"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jeannine M. Petersen","raw_affiliation_strings":["1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK","institution_ids":["https://openalex.org/I1289490764","https://openalex.org/I92446798","https://openalex.org/I204250578"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013574304","display_name":"John T. Belisle","orcid":"https://orcid.org/0000-0002-2539-2798"},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"funder","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]},{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]},{"id":"https://openalex.org/I92446798","display_name":"Colorado State University","ror":"https://ror.org/03k1gpj17","country_code":"US","type":"education","lineage":["https://openalex.org/I92446798"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John T. Belisle","raw_affiliation_strings":["1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK","institution_ids":["https://openalex.org/I1289490764","https://openalex.org/I92446798","https://openalex.org/I204250578"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021794266","display_name":"M. Gill Hartley","orcid":null},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"funder","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]},{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]},{"id":"https://openalex.org/I92446798","display_name":"Colorado State University","ror":"https://ror.org/03k1gpj17","country_code":"US","type":"education","lineage":["https://openalex.org/I92446798"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. Gill Hartley","raw_affiliation_strings":["1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK","institution_ids":["https://openalex.org/I1289490764","https://openalex.org/I92446798","https://openalex.org/I204250578"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001351636","display_name":"Melanie Duffield","orcid":null},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"funder","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]},{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]},{"id":"https://openalex.org/I92446798","display_name":"Colorado State University","ror":"https://ror.org/03k1gpj17","country_code":"US","type":"education","lineage":["https://openalex.org/I92446798"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Melanie Duffield","raw_affiliation_strings":["1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK","institution_ids":["https://openalex.org/I1289490764","https://openalex.org/I92446798","https://openalex.org/I204250578"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057861491","display_name":"Richard W. Titball","orcid":"https://orcid.org/0000-0002-0162-2077"},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"funder","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]},{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]},{"id":"https://openalex.org/I92446798","display_name":"Colorado State University","ror":"https://ror.org/03k1gpj17","country_code":"US","type":"education","lineage":["https://openalex.org/I92446798"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Richard W. Titball","raw_affiliation_strings":["1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK","institution_ids":["https://openalex.org/I1289490764","https://openalex.org/I92446798","https://openalex.org/I204250578"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102975795","display_name":"D. Huw Davies","orcid":"https://orcid.org/0000-0002-6763-0109"},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"funder","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]},{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]},{"id":"https://openalex.org/I92446798","display_name":"Colorado State University","ror":"https://ror.org/03k1gpj17","country_code":"US","type":"education","lineage":["https://openalex.org/I92446798"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"D. Huw Davies","raw_affiliation_strings":["1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK","institution_ids":["https://openalex.org/I1289490764","https://openalex.org/I92446798","https://openalex.org/I204250578"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010232221","display_name":"Philip L. Felgner","orcid":"https://orcid.org/0000-0002-4117-8505"},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"funder","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]},{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]},{"id":"https://openalex.org/I92446798","display_name":"Colorado State University","ror":"https://ror.org/03k1gpj17","country_code":"US","type":"education","lineage":["https://openalex.org/I92446798"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Philip L. Felgner","raw_affiliation_strings":["1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK","institution_ids":["https://openalex.org/I1289490764","https://openalex.org/I92446798","https://openalex.org/I204250578"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5088813478","display_name":"Pierre Baldi","orcid":"https://orcid.org/0000-0001-8752-4664"},"institutions":[{"id":"https://openalex.org/I1289490764","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12","country_code":"US","type":"funder","lineage":["https://openalex.org/I1289490764","https://openalex.org/I1299022934"]},{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]},{"id":"https://openalex.org/I92446798","display_name":"Colorado State University","ror":"https://ror.org/03k1gpj17","country_code":"US","type":"education","lineage":["https://openalex.org/I92446798"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Pierre Baldi","raw_affiliation_strings":["1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1 School of Information and Computer Sciences, 2Institute for Genomics and Bioinformatics, 3Center for Virus Research, University of California, Irvine, CA, 4Centers for Disease Control and Prevention, 5Mycobacteria Research Laboratories, Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO, USA and 6Defence Science and Technology Laboratory, Porton Down, UK","institution_ids":["https://openalex.org/I1289490764","https://openalex.org/I92446798","https://openalex.org/I204250578"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5088813478"],"corresponding_institution_ids":["https://openalex.org/I1289490764","https://openalex.org/I204250578","https://openalex.org/I92446798"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":4.2637,"has_fulltext":true,"cited_by_count":87,"citation_normalized_percentile":{"value":0.95165759,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"23","issue":"13","first_page":"i508","last_page":"i518"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12867","display_name":"Advanced Biosensing Techniques and Applications","score":0.6373999714851379,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12867","display_name":"Advanced Biosensing Techniques and Applications","score":0.6373999714851379,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.2563999891281128,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12946","display_name":"Fractal and DNA sequence analysis","score":0.01140000019222498,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/protein-microarray","display_name":"Protein microarray","score":0.768365740776062},{"id":"https://openalex.org/keywords/antigen","display_name":"Antigen","score":0.6604250073432922},{"id":"https://openalex.org/keywords/francisella-tularensis","display_name":"Francisella tularensis","score":0.6405332684516907},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.5696618556976318},{"id":"https://openalex.org/keywords/microarray","display_name":"Microarray","score":0.5597923398017883},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5244029760360718},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4942229092121124},{"id":"https://openalex.org/keywords/microarray-analysis-techniques","display_name":"Microarray analysis techniques","score":0.4250063896179199},{"id":"https://openalex.org/keywords/gene-chip-analysis","display_name":"Gene chip analysis","score":0.4211040139198303},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3760722875595093},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3266140818595886},{"id":"https://openalex.org/keywords/virulence","display_name":"Virulence","score":0.2433183491230011},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.22244718670845032},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.191321462392807},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.13558745384216309},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.13135558366775513}],"concepts":[{"id":"https://openalex.org/C195814341","wikidata":"https://www.wikidata.org/wiki/Q494918","display_name":"Protein microarray","level":5,"score":0.768365740776062},{"id":"https://openalex.org/C147483822","wikidata":"https://www.wikidata.org/wiki/Q103537","display_name":"Antigen","level":2,"score":0.6604250073432922},{"id":"https://openalex.org/C2780467176","wikidata":"https://www.wikidata.org/wiki/Q1003460","display_name":"Francisella tularensis","level":4,"score":0.6405332684516907},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.5696618556976318},{"id":"https://openalex.org/C186836561","wikidata":"https://www.wikidata.org/wiki/Q1931516","display_name":"Microarray","level":4,"score":0.5597923398017883},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5244029760360718},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4942229092121124},{"id":"https://openalex.org/C8415881","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Microarray analysis techniques","level":4,"score":0.4250063896179199},{"id":"https://openalex.org/C24361400","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Gene chip analysis","level":5,"score":0.4211040139198303},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3760722875595093},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3266140818595886},{"id":"https://openalex.org/C60987743","wikidata":"https://www.wikidata.org/wiki/Q1460232","display_name":"Virulence","level":3,"score":0.2433183491230011},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.22244718670845032},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.191321462392807},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.13558745384216309},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.13135558366775513}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000942","descriptor_name":"Antigens, Bacterial","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":false},{"descriptor_ui":"D000942","descriptor_name":"Antigens, Bacterial","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":false},{"descriptor_ui":"D000942","descriptor_name":"Antigens, Bacterial","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005604","descriptor_name":"Francisella tularensis","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D005604","descriptor_name":"Francisella tularensis","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D005604","descriptor_name":"Francisella tularensis","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012698","descriptor_name":"Serologic Tests","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D012698","descriptor_name":"Serologic Tests","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D012698","descriptor_name":"Serologic Tests","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040081","descriptor_name":"Protein Array Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040081","descriptor_name":"Protein Array Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040081","descriptor_name":"Protein Array Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btm207","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btm207","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/23/13/i508/23706831/btm207.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:17646338","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17646338","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btm207","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btm207","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/23/13/i508/23706831/btm207.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2188734102","display_name":null,"funder_award_id":"U01AI056464","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"},{"id":"https://openalex.org/G2203532045","display_name":null,"funder_award_id":"5T15LM007743","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G5115591099","display_name":null,"funder_award_id":"1U01AI061363-01","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"},{"id":"https://openalex.org/G7355214454","display_name":"Acquisition of Cluster and Server for Computational Biology at the University of California, Irvine","funder_award_id":"0321390","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2168807719.pdf","grobid_xml":"https://content.openalex.org/works/W2168807719.grobid-xml"},"referenced_works_count":48,"referenced_works":["https://openalex.org/W1511433968","https://openalex.org/W1538962595","https://openalex.org/W1569352169","https://openalex.org/W1578407488","https://openalex.org/W1966701961","https://openalex.org/W1988067659","https://openalex.org/W2020960488","https://openalex.org/W2029880987","https://openalex.org/W2040482262","https://openalex.org/W2050378207","https://openalex.org/W2063608300","https://openalex.org/W2079474508","https://openalex.org/W2079646503","https://openalex.org/W2087785895","https://openalex.org/W2092007780","https://openalex.org/W2094823810","https://openalex.org/W2107539594","https://openalex.org/W2108023684","https://openalex.org/W2108874685","https://openalex.org/W2109363337","https://openalex.org/W2109453886","https://openalex.org/W2118535325","https://openalex.org/W2119615851","https://openalex.org/W2120199131","https://openalex.org/W2122598723","https://openalex.org/W2124838456","https://openalex.org/W2129169740","https://openalex.org/W2131518260","https://openalex.org/W2131987814","https://openalex.org/W2137095432","https://openalex.org/W2137446975","https://openalex.org/W2138550913","https://openalex.org/W2144227498","https://openalex.org/W2146614932","https://openalex.org/W2152770371","https://openalex.org/W2154202919","https://openalex.org/W2155236584","https://openalex.org/W2155402817","https://openalex.org/W2156909104","https://openalex.org/W2157795344","https://openalex.org/W2161746138","https://openalex.org/W2165114463","https://openalex.org/W2167960824","https://openalex.org/W2168117806","https://openalex.org/W2169317607","https://openalex.org/W4211067865","https://openalex.org/W4244000367","https://openalex.org/W4294107304"],"related_works":["https://openalex.org/W292433598","https://openalex.org/W138917419","https://openalex.org/W150910722","https://openalex.org/W2384737449","https://openalex.org/W1536722219","https://openalex.org/W2412120523","https://openalex.org/W170658859","https://openalex.org/W3023720143","https://openalex.org/W2490137852","https://openalex.org/W4310366902"],"abstract_inverted_index":{"MOTIVATION:":[0],"An":[1],"important":[2],"application":[3],"of":[4,123,154,167],"protein":[5,34],"microarray":[6,41,60],"data":[7,149,216],"analysis":[8,130],"is":[9,86,131],"identifying":[10],"a":[11,38,74,116],"serodiagnostic":[12],"antigen":[13,22,96,152,174],"set":[14,175],"that":[15,186],"can":[16,190],"reliably":[17],"detect":[18],"patterns":[19],"and":[20,55,92,107,127,142,180,206,210],"classify":[21],"expression":[23,129],"profiles.":[24],"This":[25],"work":[26],"addresses":[27],"this":[28,46],"problem":[29],"using":[30,95,150],"antibody":[31],"responses":[32,126],"to":[33,51,82,147],"markers":[35],"measured":[36],"by":[37],"novel":[39],"high-throughput":[40],"technology.":[42],"The":[43],"findings":[44],"from":[45,66,100],"study":[47],"have":[48],"direct":[49],"relevance":[50],"rapid,":[52],"broad-based":[53],"diagnostic":[54,84,196],"vaccine":[56],"development.":[57,197],"RESULTS:":[58],"Protein":[59],"chips":[61],"are":[62,145,177,202,217],"probed":[63],"with":[64,69],"sera":[65,111],"individuals":[67],"infected":[68,106],"the":[70,83,121,165,187],"bacteria":[71],"Francisella":[72],"tularensis,":[73],"category":[75],"A":[76,79],"biodefense":[77],"pathogen.":[78],"two-step":[80],"approach":[81],"process":[85],"presented":[87],"(1)":[88],"feature":[89],"(antigen)":[90],"selection":[91],"(2)":[93],"classification":[94],"response":[97],"measurements":[98],"obtained":[99],"F.tularensis":[101],"microarrays":[102],"(244":[103],"antigens,":[104,115],"46":[105],"54":[108],"healthy":[109],"human":[110],"measurements).":[112],"To":[113],"select":[114],"ranking":[117],"scheme":[118],"based":[119,158],"on":[120,170],"identification":[122],"significant":[124],"immune":[125],"differential":[128],"described.":[132],"Classification":[133],"methods":[134],"including":[135],"k-nearest":[136],"neighbors,":[137],"support":[138],"vector":[139],"machines":[140],"(SVM)":[141],"k-Means":[143],"clustering":[144],"applied":[146],"training":[148],"selected":[151],"sets":[153],"various":[155],"sizes.":[156],"SVM":[157],"models":[159],"yield":[160],"prediction":[161],"accuracy":[162],"rates":[163],"in":[164,204],"range":[166],"approximately":[168],"90%":[169],"validation":[171],"data,":[172],"when":[173],"sizes":[176],"between":[178],"25":[179],"50.":[181],"These":[182],"results":[183],"strongly":[184],"indicate":[185],"top-ranked":[188],"antigens":[189],"be":[191],"considered":[192],"high-priority":[193],"candidates":[194],"for":[195],"AVAILABILITY:":[198],"All":[199],"software":[200],"programs":[201],"written":[203],"R":[205],"available":[207,218],"at":[208,211,219],"http://www.igb.uci.edu/index.php?page=tools":[209],"http://www.r-project.org.":[212],"SUPPLEMENTARY":[213],"INFORMATION:":[214],"Supplementary":[215],"Bioinformatics":[220],"online.":[221]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":9}],"updated_date":"2026-07-13T07:31:44.756512","created_date":"2016-06-24T00:00:00"}
